Pyrenophora teres: PTT_16188
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Entry
PTT_16188 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K14324
histone deacetylase complex subunit SAP18
Organism
pte
Pyrenophora teres
Pathway
pte03013
Nucleocytoplasmic transport
pte03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PTT_16188
03015 mRNA surveillance pathway
PTT_16188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pte03019
]
PTT_16188
03036 Chromosome and associated proteins [BR:
pte03036
]
PTT_16188
Messenger RNA biogenesis [BR:
pte03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PTT_16188
Chromosome and associated proteins [BR:
pte03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
PTT_16188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-ProteinID:
EFQ88070
UniProt:
E3S1R6
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MAALASEKVDRQSTTPFLLRLFFKQGAFHRLDEFDPTLPRLPTNVQIYTWQSCSLSELCK
LLFSAVPTLLPQPYAGSRIAFRLVYPDIQGSNRPGAPGRFVSRDIGSVIVGARSRDDDDD
DMDMEVVDAATVAEALKQLDGDPDKTLADVKFLVGDYIACAILPPLPDGSVPAAPPSLNG
PGRGPPPGSYGGRGRENGFGGRGDYGGYGRGGGGRFDDQRMNNGRVPTGEWRRGEAPPER
ERERERELGFGRGGGGRGRGGGDDWRERGRGRGRW
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcagctctagcctcagaaaaggttgaccggcaatcaacgacgccgtttctcttgcgc
ctcttcttcaaacaaggcgcatttcacagattagacgaatttgaccctaccctaccccgc
cttccaaccaatgtccaaatctacacatggcagagttgtagcctgagcgagctgtgcaag
ctgctcttcagcgcagtaccaactctgttaccacagccctacgcgggatcacgcattgca
ttccgacttgtgtaccctgacatacaaggctccaaccgacccggcgctccaggacgcttc
gtatcacgagacataggctcagtcattgtaggcgcacgatcaagggacgacgacgacgac
gacatggatatggaagtcgtagatgccgccactgtagcagaggcgcttaagcagctcgat
ggagacccagacaagacgcttgcagatgtcaaattccttgtcggcgactacattgcatgt
gcgatactcccaccactgcctgatggtagcgtaccagctgcgcctccatcattaaatgga
cctggaagaggaccgccccctgggtcatatgggggtcgaggacgagagaatggattcggt
ggacgaggagactatggtggttatggaaggggtgggggtggaagatttgacgatcagaga
atgaacaacggacgtgtaccgactggcgaatggagaagaggcgaggcgccgcccgagcgg
gaacgggagcgagagcgagaactaggctttggtaggggtgggggaggtcgagggcgcggg
ggtggggacgactggcgcgaacgcggccgtggaagaggacgctggtag
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integrated database retrieval system