Pyrenophora teres: PTT_16531
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Entry
PTT_16531 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pte
Pyrenophora teres
Pathway
pte03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PTT_16531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pte03019
]
PTT_16531
03041 Spliceosome [BR:
pte03041
]
PTT_16531
Messenger RNA biogenesis [BR:
pte03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PTT_16531
Spliceosome [BR:
pte03041
]
Complex B
Other components
Prp19-related factors
PTT_16531
Complex C
PTT_16531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_15
TPR_8
Mad3_BUB1_I
TPR_16
TPR_10
ARM_TT21
ARM_TT21_C
Motif
Other DBs
NCBI-ProteinID:
EFQ87791
UniProt:
E3S2I9
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MPGELLRTVTGLSRPTKRKMEPSSDLFLITDQDVAYEQDIQRNPGSVKPWLDYYSFKKSR
GSILEQAFVLERAVTTLPRSYKLWKLYLELRTKHLTKKNPAKFAPHYVKVNALFERALVL
LNKMPRIWEMYLNFLMQQPLVTTTRRTFDRALRALPLTQHNRIWALYRPFATSASGETAV
KIWRRYMQIHPEDAEDFIELLKDMRKYTEAVKKYIEILNNPRFKSKEAKGPFQFWTEMID
LIIDHAKEIDTSDDSGIDVEKIIQSGISKFPDQRGILWVGLARYWMHKGEYERARDVFEE
AVTTVMTVRDFSVVFDTYVEAEEAMIGIKLNEAAARSEKGNMDEPADADLDIRMVRFESL
MQRRPFLLNDVMLRQNPHNVIEWEKRVALWGDNKKEVVQTYTDAIAAINPKKAIGKFHEL
WTNYAKLYEAGGDLQNARVIMEKAVKVPFKSVSELAEMWCEWAEMELRNENFDKAVDIMA
KATQAPKRSNVDYFDESLSPQQRVHKSWKLWSFYVDLVESVSTLDETKKVYERIFELRIA
TPQTIVNYANLLEEHKYFEDCFKVYERGLDLFSYPVAFEIWNLYLTKAVDRKIGMERLRD
LFEQAVEDCPPKFAKVLYLMYGALEEDRGLARHAMRIYERATRAVADEDRLDMFNFYITK
SASNFGLTSTRPIYERAIAALPDAEAKEMCLKFAEMERRLGEIDRARAIYGHASQFCDPR
TSPEFWKRWESFEVQHGNEDTYKEMLRIKRSVQAQYNTDVNFIASQAVARGQQNGAPADE
DETTDAAGEDAMAALERQARAPAGFVAASTGPQGGNIKPTEEAAANPDAINLDDDL
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgaactcctcaggaccgtgaccggtctctcacggcccaccaagcgcaagatg
gagccctcgagcgaccttttcctcatcaccgaccaggacgtcgcgtacgagcaggacatt
cagcgcaatcccggcagcgtcaagccctggctggactactacagcttcaaaaagtcacgt
ggtagcatcttggagcaggcctttgtgctcgagcgcgcagtcaccaccctgccgcgctcc
tacaagctgtggaagctctacctcgagctccgcacaaagcacctgaccaagaagaatccc
gcaaagttcgcgccgcactatgtcaaagtcaacgccctcttcgaacgcgcccttgtgcta
ctcaacaaaatgccgcgcatctgggaaatgtacctcaacttcctcatgcagcagcccctc
gttaccacgacccgccgcactttcgaccgagcattacgcgcccttcccctgacccagcac
aaccgcatatgggcactataccgaccctttgccacgtctgcctcaggcgagacggctgtc
aagatttggcgccggtatatgcagatccacccggaggatgccgaggacttcatcgaactg
ctcaaggatatgcgcaagtatactgaggctgtcaagaaatacatagaaattctcaacaat
ccacgcttcaagagcaaggaagcaaaaggcccctttcagttttggactgagatgatcgac
ctcatcatcgaccatgccaaggaaattgacaccagcgacgacagcggcatcgacgtggag
aagattatccagagtggcatctcaaagtttcccgaccagcgtggcatactgtgggtaggc
ctggcgcgatactggatgcacaagggcgaatacgagagagcgcgagacgtcttcgaagag
gccgtcaccaccgtcatgactgtgcgtgacttctccgttgtgtttgatacatatgtggaa
gctgaggaggccatgattgggatcaagctaaatgaagctgctgcccgatccgagaagggc
aacatggacgagcctgccgacgcggaccttgacatcaggatggtgcgcttcgaatcactc
atgcaacgaagaccattcctgctcaacgatgtcatgctacggcagaatccccacaacgtt
atcgagtgggagaagcgcgtcgcgctatggggtgacaacaagaaagaggtggtgcagacc
tacaccgatgccattgccgccatcaatccaaagaaggcaatcggtaagttccatgagctc
tggacaaactacgcaaaactctacgaagcaggcggcgatcttcagaatgcccgtgtcatc
atggaaaaggccgtcaaggtgcctttcaagtccgtctccgagctggccgagatgtggtgc
gaatgggcagaaatggagctccgcaacgaaaacttcgacaaagcggtggacatcatggcc
aaagctacgcaagcgcctaaacgatcaaatgtcgactactttgacgaatcattgtcgccg
cagcaacgcgttcacaagagctggaagttgtggagtttctacgtcgacctcgtggagagt
gtgagcactctggatgagaccaagaaggtctatgagagaattttcgagcttcgcattgcc
acgccgcaaaccattgtcaactatgcgaatctactagaagagcacaagtactttgaagac
tgcttcaaggtctatgagcgtggtctcgatctgttcagctaccctgtcgcttttgagatt
tggaatttatacttaaccaaagctgttgaccgcaagatcggaatggaacgcttacgagat
ttgttcgaacaggccgtcgaagattgtccacccaaattcgccaaggtactgtacctcatg
tatggtgcgttggaggaggaccgtgggcttgccagacatgccatgcgcatctacgaacgt
gcaacacgagccgtggcggacgaagacagattggacatgttcaacttttacatcacaaag
tcagcatcgaacttcggtcttacatcaacacgacccatttacgagcgtgccatagctgcc
ttacccgacgccgaagccaaagagatgtgtctcaagttcgctgagatggaaagacgtttg
ggagagatcgatcgggcacgagcaatctacggccatgccagtcaattttgcgacccgaga
acgagtcccgagttctggaagcggtgggagtctttcgaagtccaacatggaaacgaggac
acctacaaagagatgctgcgcatcaaacggagtgtccaggctcaatacaataccgatgtc
aacttcatcgcctcccaagcagtcgctcgcggccagcagaacggcgcaccagccgacgaa
gacgagacaacagacgctgccggcgaggacgcaatggcagccctcgaacgtcaagctcgc
gcgcctgcaggcttcgtcgctgccagcactggtcctcaaggtgggaacatcaagcccaca
gaggaagcagccgccaaccccgacgcgattaatctcgacgatgatctatga
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