Pyrenophora teres: PTT_16692
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Entry
PTT_16692 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
pte
Pyrenophora teres
Pathway
pte03022
Basal transcription factors
pte03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PTT_16692
09124 Replication and repair
03420 Nucleotide excision repair
PTT_16692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pte03021
]
PTT_16692
03400 DNA repair and recombination proteins [BR:
pte03400
]
PTT_16692
Transcription machinery [BR:
pte03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PTT_16692
DNA repair and recombination proteins [BR:
pte03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PTT_16692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Serpulina_VSP
Motif
Other DBs
NCBI-ProteinID:
EFQ87711
UniProt:
E3S2U4
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MNTIDGSDRHVNTEEVPPPSLLAIVLDTNPHAWAHLSSTLSLSAALANILVFINAHLASG
NANEVAVIASHSHKTTFLYPTPLSPQPQSRHGTNDSTGTNGATNDKEHAMAESANKYRPF
AVVESAILRNFVKLLNETKESHLEATPTTLIGGALSLALTHINKQTILHAPTAASAESTA
LSALADSENTHVDRVPLTSRILIVSVSGDLANQYIPVMNSIFAAQRKRIPIDILKLAGDT
VLLQQASDATGGVYMKPDRPEGLLQYLMMAFLPDATARTSLVVPSAGGVDFRAACFCHRK
VVDIGFVCSVCLSIFCNPDLSDNLCMTCGSYLSLRSAVTNPPALIPRKKKKKKKAGTESA
TPGGNTPSGTGTPLHP
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaacactatcgatggttccgaccgtcacgtcaatacagaagaggttcccccgccatcc
ttactagccatcgttctcgataccaatccacatgcgtgggcgcatctttcatcgaccctc
tcactctcggccgcccttgcgaatatcctcgtcttcatcaacgcacacttggcttcgggc
aacgcaaatgaagtcgccgttatagcctcgcactcacacaaaactaccttcctctatcca
acacccttgagcccgcagcctcaatcgcgacatggcaccaatgacagcacgggcacgaat
ggagctacaaacgacaaggaacatgccatggcagagagtgcaaacaaataccgcccattt
gctgtagtagagagcgccatcttgcgcaactttgtaaaactgctcaacgagacgaaagag
agccacctggaagcgacacccacgacacttatcggtggcgccctctccctagctctcacc
cacatcaacaagcaaactatcctacatgctccaacagccgcttctgccgagagcacagct
ctatccgcacttgccgattccgaaaacacacacgtcgatcgtgttcccctcacatctcgt
atcctcatcgtatcggtgtctggcgatctagcgaaccaatacatacctgtcatgaactct
atttttgccgcacagcggaaaaggatacccattgacattctaaagctagcaggagacact
gttctacttcagcaggcgagcgatgcgactgggggcgtttacatgaagccggaccgtcca
gagggcttattacagtacctaatgatggcatttctaccagatgcaacggcaaggacaagt
ctggtagtcccgagtgccggtggtgttgactttcgcgctgcttgtttctgtcaccgcaag
gttgttgacattggctttgtctgcagtgtgtgcctaagcatcttttgcaacccggacctg
tctgataacctctgcatgacgtgcggctcttatctgtcgctacgcagtgccgtgaccaat
ccgccagcattgatacctagaaagaagaagaaaaagaagaaggctgggaccgagtcggca
accccaggggggaatactccttcaggaaccggcacgcctctgcatccttga
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