Pyrenophora teres: PTT_17169
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Entry
PTT_17169 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pte
Pyrenophora teres
Pathway
pte03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PTT_17169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pte03041
]
PTT_17169
Enzymes [BR:
pte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PTT_17169
Spliceosome [BR:
pte03041
]
Complex A
U2 snRNP components
U2 related factors
PTT_17169
Complex B
PTT_17169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
OLD-like_TOPRIM
Motif
Other DBs
NCBI-ProteinID:
EFQ87363
UniProt:
E3S3T5
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MASRHTDYERRRYSPRRDRSRDRRDRGDRYGGPGGGRYGPDRRDRDRRDDRRDDRRDDRR
DDRRGDRRDVRRDDRREYRPRSRSPARRDRSRDRTYRRDDDRDRRNRSNSYRPGSRSSGR
PGSRSSATPAPDSRRDRLDSTSRDERKKDPETLAKEKLADRAAKLAEWKKRNAERLAKEK
TDTPGSGASPAGTAPATPTVDATPLPVPATEAKFEIAKSKVPQKSATEKVKQKQPEKSTF
RLDASAAARPLDLAKPAGKTVTSVANSMPPPPRPTVNHSLTELDSGASKANGNIGSFGLK
TKTAAEVEAETSRKALLDEEGPTRKRKFQALPEFNNHDEPEPEANGAEDDTAMSAIGSED
EENNAELQARLEKRRAEIAIESQQDTVMEEAPNVAAPAADQMEVDQNAGAEEDDIDPLDA
FMADLAEPQPTHNAPSGEAMFADELEPIEMSVADEDINQLRAAKKKKKEVITVDHEKVEY
EPFRKNFYTEPAEISQMKPEEVADLRFELDGIKVNPDDVPRPVTKWAQMGLLQATMDVFT
QVRYEKPTAIQSQAIPIAESGRDLIGVAKTGSGKTLAFGIPMIRHILDQRPLKPSDGPIG
LILAPTRELSLQIVHELKPFLAASGITIKCAYGGQPISEQIAMLKRGGIHILCATAGRLI
DLISCNSGRVLSFKRITYVVLDEADRMFDMGFEPQVMKILANVRPDRQTILFSATMPKNM
HALAKKALKDPVEITIGGKSKVAAEITQIISVVPPSYDKKINKTLLHLGQLFAEDENAQV
LIFTERQETAEDLLSKLYKAKYFSVNTIHGAKDQTDRNEAISDFKQGVLSILIATSVAAR
GLDVPGLAMVFNFDCPTHLEDYVHRCGRTGRAGNKGTAITLIENPGQERFAVHIVKALKE
SDTEVPEELQQMANTFHKKCKEGTEKYYGGFGGKKGGLDKLDKARALEKKRERQQLKLEG
VEVEASEDEEEEPKKPEVAGPDTAKAADGAKAATEVDDQPHWMKLLNSKIVVNKTERPEA
TTSGKPMSARERAMAAASKVDGRLSKKGMIHAGQPIDNKGPDAGLYHSTIEINDFPQKAR
WAVTNRTNVAKILDQTGVSITTKGNFYAAGKEPGETDLPKLYILVEGDTENVVTKAMMEL
TRLLREGTIAAEDASAVRQPTGRYKI
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcacgccacactgattacgagcgcagacggtatagtccgcgccgtgatcgttca
cgagaccggcgagatcggggagatcgctacggtggccctggaggagggaggtacggtcct
gaccgacgcgacagagaccgccgtgatgaccgacgtgacgaccgacgtgacgaccgacgt
gacgaccgacgtggtgatcgccgcgatgtgcgtcgtgacgaccgccgtgagtatcgacct
cgttcgcgttcgcctgcgcgccgtgatcgttccagagatcgcacgtacaggcgcgacgac
gaccgcgataggcgtaaccgctccaattcgtacaggcctggttcacgctcgtctggtagg
cccggttctcgctcatctgccacgccggcgcccgacagcagacgcgaccgcctagacagt
acctcgcgcgacgagaggaagaaagacccagagacattggccaaggagaagctggcagat
cgcgccgcaaagctcgccgagtggaagaagcgcaatgctgagcgtcttgccaaagagaag
acagacacgcctggttctggtgcatcgccagctggcacggcgcctgcaacacctacggtt
gatgcgacgccgttgccagtcccagcaacagaggctaaatttgagattgcaaagagtaaa
gttccacagaagagtgcgactgagaaagttaaacagaagcagccggagaaatccaccttt
aggctcgatgcctccgctgcagcacgaccgctagacctggctaagcccgccggcaagaca
gtgactagtgttgctaacagtatgcctcccccaccccgtccgacagtgaatcatagcctt
acagaattagattccggtgcctcaaaggccaacggtaacatcggttcttttggcctgaaa
accaagactgccgccgaggttgaggctgagacttcgaggaaggcacttctcgacgaggaa
ggccctactcgcaagcgcaagttccaagctctgcctgagtttaacaatcacgacgagccc
gagcccgaagctaacggcgccgaggacgatactgctatgagcgctatcggtagtgaagac
gaagagaacaacgctgagctacaggcacgccttgagaagcgtcgcgccgagattgctatc
gagagccagcaagatactgtcatggaagaagcccccaacgtcgcagcccctgccgccgac
caaatggaggttgaccaaaacgcaggcgccgaagaagatgacattgaccctctcgatgcc
ttcatggctgatctcgccgaaccacagccaacccacaacgcaccatccggtgaagccatg
ttcgccgatgaacttgagcctatcgaaatgtccgttgcagacgaagacatcaaccaactt
cgtgcggccaagaaaaagaagaaggaggtcataaccgtcgatcatgagaaagttgagtat
gagccgttccgcaaaaacttttacactgagccagccgaaatctctcagatgaagccagag
gaagttgccgatctccgctttgaattggatggcatcaaggtaaaccctgacgacgttccc
cgacccgtgacaaagtgggctcagatgggcttgctccaagcaaccatggatgtcttcaca
caggtacgctatgagaagcctactgcgattcagtcgcaagccatacccatcgctgagagc
ggccgcgatctcatcggagtagccaaaaccggttccggaaagacgcttgcgttcggtata
cccatgattcgtcacatacttgatcagcgtcccctgaagccctctgatggccccattgga
ctaatcctcgccccgacacgtgaattgtccttgcagattgttcatgagctcaaacctttc
cttgccgcttccggaatcacgatcaagtgcgcatacggcggtcagcccatctccgaacag
attgctatgctaaagcgtggtggtatacatattctgtgcgccacagcaggacgcctcatt
gatctaatctcctgtaattctggtagagtccttagcttcaagcgcatcacttatgtcgtt
ctcgacgaagctgatcgcatgttcgacatgggctttgagcctcaagtgatgaagatcctt
gccaatgtacgccccgaccgtcagaccattctcttttcagccactatgccgaagaacatg
catgctttggcgaagaaggccttgaaggacccagtagagatcaccattggtggtaagagt
aaggttgctgcggagatcactcagatcatctctgtcgtaccccctagctatgataagaag
atcaacaagacactgctgcatctcggccaactattcgctgaagatgagaacgcccaggta
ttgatcttcactgagcgacaagagacggccgaggatctcttgtcaaagctctacaaggct
aagtatttctctgttaacaccatccatggcgctaaagaccagacggatcgtaacgaagcg
atcagtgacttcaagcaaggtgtactttccattttgatcgctacttcagttgcagcccgt
ggtctagatgttccaggtctggccatggtcttcaactttgactgtccgactcatttggaa
gactatgttcacagatgtggtcgtactggccgtgcaggcaacaaaggaactgctatcact
ctgattgagaaccctggccaagagcgcttcgcagttcacatcgtcaaggcactgaaagag
agtgatacagaggtacctgaagagcttcagcagatggctaatacattccacaagaagtgc
aaagaaggcaccgaaaagtactacggcggtttcggcggcaagaaaggaggtcttgacaag
cttgacaaagcacgtgctcttgagaagaagcgtgagaggcagcagctcaagctcgaaggc
gttgaggtcgaagcgagtgaggatgaggaagaggagcccaagaagcccgaagttgctgga
ccggacactgccaaggcggctgacggagctaaagcggcaactgaagttgatgatcaacca
cactggatgaagctactgaacagcaagattgttgtcaacaagaccgagcgtcctgaagcc
acaacctcgggcaagccgatgagtgcgagggagcgagccatggctgctgcttccaaggtg
gacggaaggttgagcaagaagggtatgattcacgcgggtcagcccatcgacaacaagggc
ccagatgccggtctgtaccactccaccattgagatcaacgactttccgcagaaagctcgt
tgggccgtcaccaatcgcaccaacgtcgccaagattctggatcaaactggtgtttccatc
actacaaagggcaacttctacgcggcaggcaaggagcctggtgagactgacctccccaag
ctgtacatccttgtggagggtgacactgagaacgttgtgaccaaggctatgatggaactc
actcgccttttgcgcgaaggtaccattgcagccgaggatgcttctgcggttcgtcaaccc
acgggccgttacaaaatttga
DBGET
integrated database retrieval system
