Pyrenophora teres: PTT_17759
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Entry
PTT_17759 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pte
Pyrenophora teres
Pathway
pte03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PTT_17759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pte03041
]
PTT_17759
Enzymes [BR:
pte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PTT_17759
Spliceosome [BR:
pte03041
]
Complex C
Other components
Step II factors
PTT_17759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
HA2_N
DEAD
AAA_22
AAA_19
T2SSE
nSTAND3
AAA_30
SRP54
GIPC1_GH2
PhoH
Cas3-like_C_2
AAA_7
TsaE
AAA_16
RSRP
Motif
Other DBs
NCBI-ProteinID:
EFQ86962
UniProt:
E3S583
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MDDLENLEFLSLVSKVTSEIQNHLGVSDKTLAEFVIDQHAKCKGVADFKSQLEAMGAEFP
QSLVESIDRLILTLHPKYKNKGAKAAGANGQDGGDATDRKTRVFKGLAIPDKEVDYEVAD
EAPANEAPDVDALDDTFAMLEGLAGKAPGKPKARSRKRSMSPYDSDDDIARSKRYRRRNT
SGSRSRSRSTSPRRGREQNDELVFEDEFGRTRTVKPSNKQRTRKKYRDEDLDEFRRPPTP
ELDEEPVLYKIYNGKVTGIKDFGCFVNIQGVKGKVDGLVHVTQMMEGRVNHPSDLVSRWQ
EVKVKVIKTENGRISLSMKEVDQQTGRDLAPGKRIASFGTGANSSGLGGIPGVDSTVPVV
EDGYNGRKNGMRKRMTSPERWEIKQLIASGVIPKSDYPNIDEDYNAHINGEGGFEEEEDV
DIEVREEEPPFLAGQTKQSLELSPIRVVKAPDGSLNRAAMAGDTLAKERRDLKQQEAQEK
AAKEAANVDLSSQWNDPMAQQRQFASDLRNTRTNEPAQALPEWKKISTNSRETSFGKRTN
MSIKEQRESLPVYKFRNKLLEAIANNQILIVVGDTGSGKTTQMTQYLAEAGYGNELVIGC
TQPRRVAAMSVAKRVAEEVGCALGNEVGYTIRFEDKTSPETRIKYMTDGILQREILLDPM
LSKYSCIMLDEAHERTIATDVLFGLLKKTLKRRPDMKLIVTSATLDADKFSEYFYKCPIF
SIPGRTFPVEVMYSREPESDYLDAALVTVMQIHLTEPAGDILLFLTGKEEIDSSCEIISE
RMKALGPNVPELMILPIYGALPSEVASRIFEPAPNGTRKVVIATNIAETSLTIDGIYYVV
DPGFVKQSSYDGKLGMDRLQITPISQAQARQRSGRAGRTGPGKCFRLYTEAAFQNEMLPT
TIPEIQRQNLSNTILMLKAMGINDLLHFDFMDPPPTNTMLTALEELYQLGALDDEGLLTR
LGRQMADFPMDPSLSKSLIKSVELQCSDEILTIVAMISATQNVFHRPRDKQQQADQKKQK
FNDPSGDHITLLNVYNGWKQGGFSTPWCHENFIMPKNMQRVRDVRNQLLQIMARHKHQVV
SCGRNTIKVRQALCSGFFRNSARKDPAEGYKTLVEGTPVYLHPSSSLFGKPAEHVIYHSL
VETTKEYMHFCSAIEPKWLVEAAPTFFKVAPTDRLSKRKKAERIQPLHNKFAGEDDWRLS
AQRRAGRGGGGTWG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctggaaaacctcgagttcctctcactcgtttccaaagtgacttccgaaata
cagaatcatcttggcgtatccgacaaaacgctcgccgaattcgtcatcgaccagcatgcg
aaatgcaaaggcgtcgcagacttcaagagccagttagaagctatgggagctgaatttccg
cagagtctggtggaaagtatcgaccgcctgattcttacactacatccaaagtacaagaat
aagggcgcaaaagctgcgggcgcaaacgggcaagatggtggagatgcgacagatcgcaag
acgcgtgtcttcaagggcctcgcgattcccgacaaggaggtcgactacgaggtagctgac
gaagcgcctgcaaacgaagcgccggatgtcgatgcgctggacgatacatttgccatgttg
gagggtctggcaggcaaggcgccgggcaagcccaaggccaggtcgcggaagaggagcatg
agcccatacgatagcgacgatgatatcgctagaagtaagcgatacaggcggaggaacacc
tcaggctcgcgctcgcgctcgcggtcaacaagcccacgccgagggcgggagcagaatgat
gagctggttttcgaggacgaatttggacgcacacgaaccgtcaagccaagcaacaagcaa
cgaacgcgcaagaagtaccgcgacgaagatctcgacgaattccgacggccgcccactccc
gagctcgatgaagagccggtattatacaaaatctacaatggcaaggtcacaggcatcaag
gattttggctgcttcgtcaacattcagggcgtcaagggcaaagttgatgggctagtgcat
gtcacacagatgatggagggtcgcgttaaccacccgtctgatcttgtatcgaggtggcag
gaggtcaaagtcaaggtcatcaagacggaaaatggcaggatatcgctgtcgatgaaggag
gtggatcagcaaacaggtcgcgaccttgcgcccggaaagcggatagcgtctttcggaacc
ggcgcaaactcgtcgggactgggaggcataccaggggttgatagtactgtgcccgttgtc
gaagacggttataacggccgcaagaatggtatgcgaaagcgcatgacttcgccagaacgc
tgggagatcaaacagctcattgcttccggtgtaataccaaagtcggactacccgaacatc
gacgaggactacaacgcgcacattaacggcgagggtggtttcgaggaagaggaggacgtg
gatattgaagtacgcgaggaggaacctccattcctggctggtcaaaccaagcaatcgctc
gagctctccccgatccgagtagtcaaggcacccgacggctcgctcaatcgcgctgccatg
gccggagatacgctcgcgaaagaacgccgtgatctaaaacagcaggaagcccaagagaag
gccgcaaaggaagcagcgaatgttgacctgagcagccagtggaacgatcccatggctcaa
caacgccagtttgcaagcgatcttcgcaacactcgcaccaacgagcctgctcaagcactg
ccggaatggaaaaagatctccacgaacagtcgggaaacttcattcggcaagcgtaccaat
atgagcatcaaggaacaacgagagtccttgcccgtctacaagtttaggaacaagcttctc
gaggctatcgcaaacaaccaaatcctgattgtcgttggtgatactggatctggaaagacc
acgcaaatgacacaatacctagctgaagctggatatggcaacgagcttgtcatcggttgc
actcagccgaggcgtgtagcggcaatgagtgttgccaaacgtgtcgcagaagaggttggc
tgtgcccttgggaatgaggtcggatacacaattcgattcgaagacaagacctcaccggaa
acccggatcaaatacatgacggacggtatcctgcagcgtgagattctcctggaccctatg
ctgtcaaagtatagttgtatcatgcttgacgaagcccacgaacgtaccatcgccacagat
gtcctgtttggactactgaaaaagaccctcaagcgacgcccggatatgaagctcattgtt
accagtgccaccctcgacgctgacaagttctctgaatacttctacaaatgccccatcttc
tctatcccaggtcgaaccttcccagtagaggtcatgtacagtcgagagccagaatccgat
taccttgacgcagcgctcgtgaccgtcatgcagatccatttgacggagccagcaggtgac
atattgcttttcttgacgggcaaagaggagattgattcatcttgcgagattatatccgag
cgtatgaaagcacttggaccaaacgtgccagagctgatgattctacccatttatggagct
cttccatcagaggtcgcatcccgtatcttcgaacccgcgcccaatggaacccgcaaagtc
gtcattgctaccaatatcgctgagaccagtttgactatcgatggtatctactacgttgta
gatccgggttttgtcaagcagagttcgtacgatggaaagctgggcatggatcgtctgcaa
attacgcccatctcgcaagctcaggctcgtcaaaggagcggaagagcaggaagaacaggc
ccaggaaagtgtttccgcctgtataccgaagcagcgtttcagaatgagatgttaccgact
actatcccggagatccagcgtcagaacctgtcaaatacgatcttgatgcttaaagccatg
ggtatcaacgatttgttacattttgacttcatggacccaccgccgacaaatactatgttg
acggcgctggaggagttgtatcaactgggtgcactggatgacgaaggactgcttacgcgt
cttggtcggcagatggctgacttccccatggacccctcactctctaaatctctcatcaag
tcggttgaactacaatgctcagatgagatcctcacaattgttgcgatgatcagcgccaca
cagaacgtcttccaccgaccgcgagacaagcaacaacaagccgaccaaaagaagcagaag
ttcaacgatccctccggtgatcatatcaccctgctaaatgtgtacaatggctggaaacag
ggaggcttcagcacgccctggtgtcacgagaacttcatcatgcccaaaaatatgcagcgt
gttcgcgacgtgcggaatcagttgctacagatcatggcgcgacacaagcaccaagtcgta
tcttgtggccgcaacacgatcaaagtccgacaagcgctgtgctcagggttcttccgcaac
tcggctcgtaaagatcctgctgagggctacaagacactcgtcgaaggcacgcctgtctac
cttcacccatcttcttctctgtttggcaaacctgccgaacacgtcatttaccactcgctc
gttgagacgacaaaggagtacatgcacttttgctctgccatcgaacccaagtggcttgtc
gaagcggcgccgacgttcttcaaggtggcgcctacagatcggttgtccaagagaaagaag
gcggagaggatacagcctctgcataacaagtttgcgggtgaggatgattggagactaagt
gctcagagaagggctggcaggggtggaggaggtacatggggctga
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integrated database retrieval system
