Pyrenophora teres: PTT_17762
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Entry
PTT_17762 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pte
Pyrenophora teres
Pathway
pte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PTT_17762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pte03019
]
PTT_17762
Messenger RNA biogenesis [BR:
pte03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PTT_17762
mRNA degradation factors
5'-3' decay
Decapping complex
PTT_17762
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-ProteinID:
EFQ86965
UniProt:
E3S586
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MSFFGFDTSMPHDRGHASNAPGFGQHDAFAALGGGAVEGDVIDFEETYDGLGDQLDDEAD
DLNDDTFGGGPATQQSVGKHFDFAGQTSMVSSTLQEEQMLYQARNQVPRQQQQQQQAHQQ
QYQQQYQQRPPVPQASKPNRTGYESYKDPEYIPQLEARADIWGLKPKAPASQQQQQQPSP
QLAPATQQAPPSRKVMSMEEVEAMMRVQSIGNDPRATPPVQHVQHVPQGFPGYPQQQYQQ
QQQQQFPHGQQQYPGMPGGPMPGQYAPQILQRPQQQQHSPQIRAELPDQPIRSQPPQQPT
ILQRQRPQSNEHVAQQQRQGPPQAQAQGPSGQPRHILQNPNRLSGQGQPMVQTGPQAGRG
QPAAHNRGPSFPGMVITHPEQLLQLSEAERAAFLEEDAKRAKRNHKIALLAKDNGLMTPQ
DKNFITRIQLQQLMTATGNLEERGPEAAIAEDFYYQVFSQIRGAPRHNPQQPASQFAQTY
LFQTNNRFGARRQGRGGDNHMQRMEQQIQRAVEAAKARPKARQLVVEGSLGKIAFSNSKT
PRPLLNLKRPETNDKLPKSHKSSIADRKEALRNIEAVYRSLMQMEDHERAMPPPIQEGSP
PEAIQAHMEWRSKIDVLHEQLWSNTKIMEPINPSAPHPFISILSHAKGKKVIPRLFRHIN
EQERITVVTMIVVHLDALSVVGHAIATPDEPLSAAIREEVDLFSQTVMSPIHAHISDAPL
NIVIGLLGLVLDRTNLHVVARSKIGLTLLTFLISRAELLKQSAPEMVTDWQQWTNLYNRL
FDVIEPVLPYLFPGSINDTDDMYIWQFLAAMGVGASPEQQQRLVLGVKDRVMETVAVSKA
LPADMASARTSNVNLFMRAIGLDVELLG
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctttggcttcgatacgagcatgccgcatgatcgcggccatgcctcgaatgct
cccggctttggtcagcacgatgccttcgccgccctcggcggtggggcagtcgagggcgat
gtcatcgactttgaagaaacctatgatggcctcggcgaccagctcgacgatgaggctgat
gatctcaatgacgacaccttcgggggtggccctgcgacgcagcagtctgtgggcaagcac
tttgactttgccggacagacatccatggtctcgagcacattgcaagaggagcagatgctc
taccaggctcgaaaccaagtccctcgtcagcagcaacagcaacagcaggcgcaccagcag
cagtaccagcagcaataccagcaaaggcccccggtcccacaggcctccaagcccaatcga
actggctacgagagctacaaggacccagagtacattcctcagctcgaggctcgtgccgac
atttggggcctcaagcccaaggcgccggcttcgcagcagcagcagcagcaaccctcgccc
cagcttgccccagctacccaacaagctcctccatcaaggaaggttatgagcatggaggag
gtcgaggccatgatgcgcgtacagtcgattggcaacgaccccagggctactcctccggtt
cagcacgtccagcacgtcccgcagggcttcccgggctatcctcagcagcaataccagcag
caacagcagcagcaattccctcacggacagcagcaatatcctggtatgcctggcggaccc
atgcctggccagtatgcaccccagattctacaaagaccccaacaacagcagcactcaccg
cagattcgagctgagcttccggatcagcctatccgatcgcagccaccccagcagcccacc
atcctccagcgacaaagacctcagtcgaacgagcatgtcgcccagcaacagcgacagggg
ccaccccaagctcaagcccaaggcccgtctggacaaccccgacacattttgcagaatccg
aaccgtctttctggtcaaggtcagcccatggttcagactggcccccaagctggtcgtggc
caacctgcagcgcacaacagaggtccttcgtttcccggcatggtcatcactcacccagag
caacttctccagctatccgaggcagagcgtgcggccttcctcgaagaagacgccaagcga
gctaagcggaaccacaagattgctctgttagccaaggacaacggccttatgacaccccaa
gataagaatttcattacccgaatccagttgcagcagttgatgactgcgaccggcaacttg
gaggagaggggacctgaagcagccattgccgaagacttttactaccaggtcttcagccag
attcgcggtgctccacgtcacaatccccagcagccagccagccaatttgcccagacctat
ctgttccagaccaacaacaggtttggcgcccgcagacagggccggggaggtgacaatcac
atgcagcgcatggaacagcagattcaacgagccgttgaagctgccaaagcgaggccaaag
gcccgacagcttgttgttgaaggaagtctcgggaagattgcctttagcaactccaagacc
ccacgtccgctgctcaatctcaagcgccccgaaaccaacgacaagcttcccaagtctcac
aagtcttctattgccgatcgcaaagaagctctccgcaacatcgaggctgtatacagaagc
ctcatgcagatggaagaccatgagcgagccatgccaccaccgatccaagaaggcagcccc
cctgaggcaattcaggcacacatggaatggcgatcgaagattgacgtgctgcacgagcaa
ctctggtcgaacacgaagatcatggaacccatcaaccccagcgcacctcaccccttcatc
tctatcctctcgcacgccaagggaaagaaggtgattccgcgcctcttccgccacatcaat
gaacaggaacgcatcacagtcgtgaccatgattgtggtccaccttgatgctctctcggta
gttggccatgccatcgctacgcctgacgagcctttgagcgcagcgatccgagaggaagtc
gaccttttctctcaaactgtcatgtcgccgatccatgcgcacatctcagacgcgccgctg
aacattgtcattggtcttcttggtcttgtcctagatcgtacaaacctccatgtcgttgct
agaagcaagattggtctgacgctactgacgttcctgatttctcgggccgaactcctaaag
caatcagctcccgagatggtcaccgactggcagcaatggaccaacctttacaaccgtctg
ttcgacgtcatcgagcccgttcttccttatctgttccccggaagtatcaacgataccgac
gacatgtacatctggcagttcctcgccgcgatgggtgtgggagctagtcccgagcagcaa
cagaggcttgtgctcggcgtcaaggaccgtgtcatggaaaccgtggctgtcagcaaggcg
ttgccagctgacatggcgagtgctcgaacgtcgaacgtgaatcttttcatgagggccatc
ggtctggatgtggagcttcttggatga
DBGET
integrated database retrieval system