Pyrenophora teres: PTT_18243
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Entry
PTT_18243 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K18716
nucleoporin NUP42
Organism
pte
Pyrenophora teres
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pte03019
]
PTT_18243
Messenger RNA biogenesis [BR:
pte03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PTT_18243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG
zf-CCCH_4
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Motif
Other DBs
NCBI-ProteinID:
EFQ86503
UniProt:
E3S6A4
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MGVCAFYQRGACKFGDNCKNEHPGSARDRGGGFGGGNNRFGAFNGDRYRPGQDSGSNAFG
GNRDSKTPAFHLDRDDIKADLTTQRPVYPLSCYGPGRDAPRQLIEGPVEISPEELRFKYY
TLRATGNEAAAQQEESALNEKMQSQVKTILDKISDAIQYIEEGANIHPNRIDIAKGNIAA
TGSTNAATGLSGSTASPFGQASASPFSTGASAQPSAFGQASTPGFGKPAFGQPSNPAQTT
SAFGQPSNPGQTTSAFGQPSNPGQTTSAFGQPSNPGQTTSAFGQPSNPGQTTSAFGQAST
PGQSASPFGAASALGQKPSPFGQPSALGGAGSAFGKPAFGASGFGQPSMPGAGSAFGQTS
SIGQGSAFGQPSAPGAASGFGQTNALGQKPNPFSKPGFGQSGFGQTAQPGASASPFGQQA
QSGASPFGQQAQSGTSPFGQQAQQSSQPSPFGQAAQQPAQSSPFGQQASQAQKPNPFGQP
QAPTQASPFGAVAASSTPAFGQPSKPSPFGTAAAQPATTQQAQTANPFLKAAAPATSSPS
PFGTQAQQAQSQTQNNTSALPQQQQQPSSEQPTSSARPHVPGVTPDGKPIDPKDRYKEGK
PEEYEGEQGRILEEIYRRVSQLKMFNDGEDIPLTPPKCEWIVPLPL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgggagtctgcgccttctatcagcgcggtgcttgcaagtttggtgacaactgtaaaaat
gagcatcctggaagtgcgcgagatcgcgggggcggttttggtggagggaacaaccgcttc
ggtgccttcaacggcgaccgctatcgcccaggtcaagacagcggatccaacgcatttgga
ggcaatcgtgactccaagacaccggctttccacttggacagagacgacatcaaggctgat
ctcactactcagcgtccggtctatccgctttcatgctatggcccaggacgagatgctcca
cgtcaactgattgagggacccgtcgagattagtccggaagagctacgctttaagtactac
accctacgggcgacaggcaatgaagccgccgcccaacaagaagagagtgctctcaatgaa
aagatgcaatcacaggtgaagactatcttagacaagatatctgacgcaatccaatatatt
gaagaaggtgccaacatccatcccaatcggattgatattgccaaaggcaatatcgctgcc
actggatccaccaatgccgcgaccgggctctccggttcaaccgccagtccctttgggcaa
gcatcagcgagtccattttcgacaggggcatccgcacagccgtcagcattcggacaggct
tcaacaccagggtttggtaagccggcgttcgggcaaccctctaatccagcacaaaccacc
tccgctttcggtcagccttcgaaccctggacaaactacatcagcttttggccagccctca
aacccgggacagacgacatcagcttttggtcagccttccaaccccggtcaaaccacttca
gcattcggccaaccttcgaatcctggacagactacttcggcctttggtcaagcgtcaacc
ccgggtcaatcagcttcacctttcggcgcggcatcggcactgggccaaaagccatcacct
ttcggtcagccttcagcgctcggaggtgcggggagtgcatttggtaagcctgcttttggc
gctagtggttttggtcaaccgtccatgccaggtgcaggaagtgcattcgggcaaacgagc
agcataggccaaggctcagcgtttgggcagccatcagcaccaggtgcagcatctggattt
ggacagacaaatgctctgggacagaaaccgaatcctttcagcaagcccggcttcggtcag
agtggatttggtcagacagcgcagcctggtgccagtgcttctccatttggccaacaggca
cagtccggcgcgtctcctttcggccaacaggcacaatcaggcacgtctcctttcggccaa
caagcacaacaatctagtcaaccttcgccatttggtcaagcagcccagcaaccggctcag
tcctcgccgttcggtcagcaggcgtcacaagcacagaagccaaatccattcggccagcct
caggcacccactcaagccagcccctttggcgctgttgcagcttcctcaacgccagccttt
ggtcaaccaagcaagccctcgccttttggcacggcggcggcacagcctgccaccacacaa
caagcacaaaccgccaacccgttcctcaaggccgcagctcctgcaacctcatcaccatcg
cccttcggcacccaagcacagcaagctcagtcccaaactcaaaacaacacatcggctctc
ccccagcagcaacaacaaccatcttcagagcaacccacttcatcagcacgtccccacgtc
ccaggcgtaacccccgacggtaagcctattgaccccaaggaccgatacaaggagggcaag
ccagaagagtatgagggcgagcaaggcaggattctagaagaaatctacaggcgtgtctcg
cagcttaaaatgttcaatgacggtgaggatattcctcttacaccgccgaagtgcgagtgg
attgtaccgcttccgctgtga
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integrated database retrieval system