Pyrenophora teres: PTT_19526
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Entry
PTT_19526 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
pte
Pyrenophora teres
Pathway
pte03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PTT_19526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pte03021
]
PTT_19526
03019 Messenger RNA biogenesis [BR:
pte03019
]
PTT_19526
Transcription machinery [BR:
pte03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PTT_19526
Messenger RNA biogenesis [BR:
pte03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
PTT_19526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_C
CID
Pfc11_Clp1_ID
VHS
zf_PCFS4
Motif
Other DBs
NCBI-ProteinID:
EFQ85514
UniProt:
E3S936
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MSLPAAEVAADFRDALQDLKMNSRPEISNLTLIAKENTEYAEAISNELDKHIRTTRPEYK
LPALYVLDSIVKNVGTPYTVYIGRNLYKTFMESYLVMDQGTRKSMEGLLKTWKMPVPESM
DPRPVFQADVTQDIENALAKFRAAQQQIRPQHALPPRPPSLNVAWRGTSTPPQTGPRYAA
PNDPRTRPSHPPTPQYGPAPTATPTMAYNQPQQPQPMSSVDLADLKVEVTQLISTTQNMF
AHNPADAALRTKLSALLSLKQILDTQTLPPQQLEAVRRQIRALAPPPAPTPTFAPSTPVY
PPQQAMPPAYPPTFPQIGASPGSAPPNVAQLLAGLSRPPVQSTPQPAPTPNPPVLNLAEL
LKRVSTPAQSNSASAPAPFQPPFQGYPPPVSTPVPAVQPPPQSTTPTANLAELLAQFSKP
GGAPPPMQSTPLQTTAVPQLPPQPTAAPALGSPEWLLKALSSMPGSTPVNAMPMAPQSIT
QQTPAPTSLMDQIALTTASMKQPRFNLISRLYEAKPNICATCGRRFENTTEGKEKKARHM
DWHFKVKDPDAAKRGFHRSWYIPEKEWVEYREVDETAPNQSNDSAGGAAKAKKQTKDRYV
SVPQDVTLQQAPCPICQEKFETQWNVGANDFVWMDALCVGGKIYHATCFEEYSKGVGIEM
PGTPDSVLGKRKADINANMDGKKVRAY
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgccggctgctgaagtagcagctgattttcgggatgctttgcaagatttgaag
atgaatagcagaccagaaattagtaacttgactctcatcgccaaagagaacacagagtat
gcagaagccatatccaacgagctcgataagcatattcgcacgacacgccccgagtataag
cttcccgccctctatgtgcttgattccattgtcaagaatgttggaaccccatataccgtc
tacattggtcgaaatctctataagaccttcatggaatcctatcttgtcatggaccagggc
acccgcaagagtatggaaggcttgctgaaaacgtggaaaatgcctgtgcccgagtcgatg
gatcctcgcccggtgttccaagccgatgtgacgcaggacatcgagaatgcactggctaag
ttccgtgcagctcagcagcagatcagaccacagcatgcacttccacctcgtcctccgtcg
ctcaacgtagcctggaggggcacatcaacaccaccgcagactggcccacgttatgctgct
cccaacgacccgcgaactcgaccatcccatccaccaaccccacaatacgggcctgcacct
acggccacgccgaccatggcatacaaccaacctcaacagccacagcccatgtcatcagtt
gaccttgctgatctgaaggtggaggtcacacagctgattagcacaacacaaaatatgttc
gcacataacccagccgatgctgctctgcgaacgaagctatcggcgctcctgtctctcaag
cagatcctagatacacagacactaccgccacagcaactagaagccgttcgccggcagatt
cgggcattggcacctccacctgcgccaactccaaccttcgccccatcgacgccagtatac
ccacctcaacaggccatgcctccagcctaccctcccacttttcctcaaataggtgcctct
ccaggcagcgctccaccgaatgttgcacaacttcttgcaggccttagcagaccgccagtg
cagtcaacgccgcaacccgcaccaacgccgaatccaccagttctgaacctggcagaatta
ctaaagcgtgtatcgacgcccgcacaatcaaattcggcatccgcgcctgctcctttccaa
ccgccatttcaaggctatccaccgcctgtctcaaccccagtaccggcagtccagccacct
ccgcagtccactacaccaacagccaacttggcagaacttcttgcccaattcagcaaacct
ggaggtgcaccacctccaatgcaatcgactcctttgcaaacaactgctgttccccagttg
ccaccacaacccactgccgcccctgcgctgggtagccctgaatggctcttgaaagctcta
agcagtatgcctggatccacacctgtgaacgcaatgccaatggcaccccagtccataaca
cagcaaacgccggcaccaaccagtttgatggatcagattgcgctcaccaccgcgtcgatg
aagcaacctcgtttcaaccttatctcccgactctacgaagccaagcccaacatctgtgct
acctgcggtcgccgctttgaaaacacaactgagggcaaagagaagaaggctcgacatatg
gactggcactttaaagttaaagatccagatgccgcgaagcgaggtttccaccgttcctgg
tatatccccgagaaggagtgggttgaatacagagaagtcgacgagactgccccaaatcag
tccaacgactccgctggcggcgcggcaaaggccaagaaacaaacaaaagatagatacgtc
agcgttccccaggatgtgacgctgcagcaagcaccatgtccgatttgccaagagaaattt
gagactcagtggaacgtaggggccaacgattttgtgtggatggatgccctgtgtgtgggt
ggaaagatataccatgccacatgtttcgaagagtacagtaagggcgtgggcattgaaatg
ccgggcactccagactctgttctcgggaagaggaaagctgatattaatgctaacatggat
gggaagaaggttcgtgcatactag
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