Pyrenophora teres: PTT_19586
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Entry
PTT_19586 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pte
Pyrenophora teres
Pathway
pte03013
Nucleocytoplasmic transport
pte03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PTT_19586
03015 mRNA surveillance pathway
PTT_19586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pte03019
]
PTT_19586
Enzymes [BR:
pte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PTT_19586
Messenger RNA biogenesis [BR:
pte03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PTT_19586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
EFQ85468
UniProt:
E3S989
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MASTEETPIKQEAEAPAAEASAEETPAQEPESSLETAQVDGAGAPAKGADLVDTTYKVEV
KLADLQADPNNPLFSATSFEELQLSEALLKGVRNMNFRKPSKVQEKALPLLLMDPPQNMI
AQSQSGTGKTAAFSLNILSRIDLSNPNPQALALAPSRELARQILGVITHMGQFMDGLTTM
AAVPDPSRKGQAYNAQVLVGTPGTVQDMLRRRLINNKNIKILVLDEADNMLDQQGMGEQC
TRVKALLNKDIQTVLFSATFPPNVIAYAKRFAPNANLITLAHDELTIEGIKQLYIDIDKD
NDKYSTLLKFYGLMTQASSIIFVRTRRTAEELEKRMVAEGHKVAQLSGALEGPERDRIID
QFRSGEAKVLITTNVLARGIDVQSVTMVINYDVPTMANGIDADPETYLHRIGRTGRFGRV
GVALTFIHDKNSWQQLHNIASYYKTELYPIDTSDWDAVEDMIQTIIKSSRAGKTTEEMTE
MITKGS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaccgaggagacacccatcaagcaagaggccgaggccccggcggcggaggct
tccgcagaggagactcccgcgcaagagccagaaagctcgctcgagactgcccaagtcgat
ggcgctggtgcaccggcaaagggtgctgatttggtcgacaccacatacaaggtcgaggtc
aagcttgccgacctgcaggcagaccccaacaaccctctgttctcggccacgtcgtttgaa
gagcttcaattatccgaagcgctactcaagggcgtccgcaacatgaacttccgaaaaccc
tcaaaggtccaagaaaaggccctgccactgcttctgatggacccgccccaaaacatgatt
gcgcaatctcaatcaggaactggcaagacagctgccttttcgctgaacatcctctctcgc
atcgacctatcgaaccccaacccacaagcactcgcgctcgcacccagccgagagcttgcc
cgtcaaattctaggcgtcatcacacacatgggtcagttcatggacggtctcacaaccatg
gccgcagttcccgacccgtcaagaaaaggacaagcatacaacgcccaggttctcgtcggc
acaccaggaacagtccaggatatgctgaggcgccgtctgatcaacaacaagaacatcaag
attctagttctggacgaggcggacaacatgttggatcaacaaggcatgggtgagcagtgc
actcgtgtcaaggctctccttaacaaggatatccaaactgtcctcttctccgctactttc
ccacccaacgttatcgcatacgccaagcgcttcgcacccaacgccaacttgatcacccta
gcgcacgacgagctgactatcgagggcatcaagcagctatacatcgatatcgacaaggac
aatgacaaatattcgacactactcaagttctacggtctcatgacacaagcctcatcaatc
atcttcgtccgaacccgaaggaccgctgaggagctcgagaagcgaatggttgcagaaggc
cacaaggttgcacaactcagtggtgctctcgaaggccctgagcgtgatcgcatcatcgac
cagttccgttctggagaagccaaggtacttatcactaccaacgtgcttgctcgcggtatc
gacgtccaatctgttactatggtcatcaactacgatgtcccgaccatggcaaatggaatc
gacgcagacccagaaacctaccttcaccgcatcggtcgtaccggtcgttttggacgtgtc
ggtgttgccctcaccttcatccatgacaagaacagctggcagcaactgcacaacatcgcg
tcgtactacaagactgaactgtatcctatcgatacttcagactgggatgctgttgaggac
atgattcagaccatcatcaagtcgtcacgagccggcaagaccaccgaagaaatgacggag
atgattacaaaaggatcgtag
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integrated database retrieval system
