KEGG   Pyrenophora teres: PTT_19733
Entry
PTT_19733         CDS       T01613                                 
Name
(GenBank) hypothetical protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
pte  Pyrenophora teres
Pathway
pte03020  RNA polymerase
pte03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pte00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PTT_19733
  09124 Replication and repair
   03420 Nucleotide excision repair
    PTT_19733
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pte03021]
    PTT_19733
   03019 Messenger RNA biogenesis [BR:pte03019]
    PTT_19733
   03400 DNA repair and recombination proteins [BR:pte03400]
    PTT_19733
Transcription machinery [BR:pte03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PTT_19733
Messenger RNA biogenesis [BR:pte03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PTT_19733
DNA repair and recombination proteins [BR:pte03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PTT_19733
SSDB
Motif
Pfam: SHS2_Rpb7-N S1 RNA_pol_Rbc25
Other DBs
NCBI-ProteinID: EFQ85355
UniProt: E3S9K2
LinkDB
Position
Unknown
AA seq 171 aa
MFFLKELEKTIQLHPSYFGPLIRQHIHRELLQKEEGSSTGKYTIVCILDSFDISDGKVMP
GTGSAEYVVHYKAVVWRPYKGEVMDGIVTSVLRTGFFVDCGSLQAFVGRSMIPAEIKFDA
NATPPQWTDDGEQVIEKGTNIRIKIKGLRSEVDKMYAVGTMKEDYLGPLPS
NT seq 516 nt   +upstreamnt  +downstreamnt
atgtttttcctcaaagagcttgagaagacgatccagttgcatccttcatactttgggcct
cttatccgccagcacatccaccgggagctgctgcagaaagaggaggggtcgagcactggc
aagtacaccatcgtgtgtatcctggactcgttcgacattagcgatggcaaggtcatgcct
ggcactggctctgccgaatacgtggtacactacaaggcagttgtatggcggccctacaag
ggtgaggtgatggatggtatcgtcacctccgtactgcgcactggcttctttgtggattgc
ggttctttacaggcctttgtgggtcgtagtatgattcctgccgagatcaagttcgacgca
aacgcaacgcccccgcagtggaccgacgatggagaacaagttatcgagaagggtacaaac
attcgtatcaaaatcaagggtctgaggtctgaggtggacaagatgtatgccgttgggacg
atgaaagaggattatcttggtccgctgccgtcatag

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