Pyrenophora teres: PTT_19852
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Entry
PTT_19852 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
pte
Pyrenophora teres
Pathway
pte03030
DNA replication
pte03410
Base excision repair
pte03420
Nucleotide excision repair
pte03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTT_19852
03410 Base excision repair
PTT_19852
03420 Nucleotide excision repair
PTT_19852
03430 Mismatch repair
PTT_19852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pte03032
]
PTT_19852
03036 Chromosome and associated proteins [BR:
pte03036
]
PTT_19852
03400 DNA repair and recombination proteins [BR:
pte03400
]
PTT_19852
DNA replication proteins [BR:
pte03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PTT_19852
DNA Replication Termination Factors
ELG1-RFC complex
PTT_19852
Chromosome and associated proteins [BR:
pte03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PTT_19852
DNA repair and recombination proteins [BR:
pte03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PTT_19852
Check point factors
HRAD17(Rad24)-RFC complex
PTT_19852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_14
AAA_22
Viral_helicase1
nSTAND3
AAA_16
RuvB_N
AAA_3
RCF1-5-like_lid
Mg_chelatase
nSTAND_NTPase5
Rad17
Gp44_lid
AAA_19
AAA_assoc_2
DNAX_ATPase_lid
AAA_11
MeaB
NTPase_1
NB-ARC
AAA_30
KTI12
Motif
Other DBs
NCBI-ProteinID:
EFQ85258
UniProt:
E3S9V8
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MSKAESSKAAAGNGAKPNPNAAGGANYELPWVEKYRPVYLDDVVGNTETIERLKIIAKDG
NMPHMIISGMPGIGKTTSILCLARQLLGDAYKEAVLELNASDERGIDVVRNRIKGFAQKK
VTLAPGRQKLVILDEADSMTSGAQQALRRTMEIYSATTRFAFACNQSNKIIEPLQSRCAI
LRYARLTDAQVVRRIMQIVEAEDVKYSDDGIAALVFSAEGDMRQAINNLQSTFAGFGFVN
GDNVFKVVDSPHPIKVQAMIKACHEQRVDDALTSLKELWDLGYSCHDIISTMFKVTKTID
TLSEHAKLEFIKEIGFTHMRILEGVQTLLQLSGCVARLCKINMQPQLFALPTK
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagccgagtcttcaaaagctgctgccggcaacggtgccaagcccaatcccaat
gctgcggggggtgcaaactatgagctgccctgggttgaaaagtatcgtcctgtctacctt
gacgatgtcgtcggcaacacggaaaccatcgagcgcctcaagatcatcgccaaagatggc
aatatgccacacatgatcatctcgggcatgccaggtatcggcaagaccacgtccatcctc
tgcctcgcccgccaacttctcggtgacgcctacaaggaagccgttctcgagctcaacgcc
tccgatgaacgtggaatcgacgttgttcgcaaccggataaagggatttgcccagaagaag
gttacgctcgctccgggcaggcaaaagctggtgattctggacgaggcagacagcatgacg
agtggtgcacaacaggcgctgaggaggaccatggagatttacagtgccacgacacgattt
gcctttgcgtgcaaccagtccaacaagatcatcgaaccgctgcagtcgagatgcgccatc
ctccgatacgcccgcctcaccgatgcccaagtcgtgcgccgcattatgcaaattgtcgaa
gctgaagacgtgaaatactccgacgacggaattgcagccctggttttctccgcagagggt
gatatgcgacaagccatcaacaacctacaatcgacatttgccggcttcggcttcgttaac
ggggacaacgtattcaaggtggtggacagcccacaccccatcaaagtacaagccatgatc
aaggcatgccacgaacagcgcgtagacgatgccttgacatcgctcaaggaactctgggat
ctaggctactcatgtcacgacatcatcagcaccatgttcaaagtcacaaagacgattgac
acgctgagcgagcatgccaagttggaattcataaaggaaatcggtttcacacacatgcgc
attctggaaggcgtacaaacccttctccaactctccggctgcgtggctcgcctatgcaag
ataaacatgcaacctcagctctttgccctcccaacgaaatga
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