KEGG   Pyrenophora teres: PTT_19852
Entry
PTT_19852         CDS       T01613                                 
Name
(GenBank) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
pte  Pyrenophora teres
Pathway
pte03030  DNA replication
pte03410  Base excision repair
pte03420  Nucleotide excision repair
pte03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pte00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PTT_19852
   03410 Base excision repair
    PTT_19852
   03420 Nucleotide excision repair
    PTT_19852
   03430 Mismatch repair
    PTT_19852
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pte03032]
    PTT_19852
   03036 Chromosome and associated proteins [BR:pte03036]
    PTT_19852
   03400 DNA repair and recombination proteins [BR:pte03400]
    PTT_19852
DNA replication proteins [BR:pte03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    PTT_19852
  DNA Replication Termination Factors
   ELG1-RFC complex
    PTT_19852
Chromosome and associated proteins [BR:pte03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    PTT_19852
DNA repair and recombination proteins [BR:pte03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     PTT_19852
  Check point factors
   HRAD17(Rad24)-RFC complex
    PTT_19852
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 AAA_14 AAA_22 Viral_helicase1 nSTAND3 AAA_16 RuvB_N AAA_3 RCF1-5-like_lid Mg_chelatase nSTAND_NTPase5 Rad17 Gp44_lid AAA_19 AAA_assoc_2 DNAX_ATPase_lid AAA_11 MeaB NTPase_1 NB-ARC AAA_30 KTI12
Other DBs
NCBI-ProteinID: EFQ85258
UniProt: E3S9V8
LinkDB
Position
Unknown
AA seq 353 aa
MSKAESSKAAAGNGAKPNPNAAGGANYELPWVEKYRPVYLDDVVGNTETIERLKIIAKDG
NMPHMIISGMPGIGKTTSILCLARQLLGDAYKEAVLELNASDERGIDVVRNRIKGFAQKK
VTLAPGRQKLVILDEADSMTSGAQQALRRTMEIYSATTRFAFACNQSNKIIEPLQSRCAI
LRYARLTDAQVVRRIMQIVEAEDVKYSDDGIAALVFSAEGDMRQAINNLQSTFAGFGFVN
GDNVFKVVDSPHPIKVQAMIKACHEQRVDDALTSLKELWDLGYSCHDIISTMFKVTKTID
TLSEHAKLEFIKEIGFTHMRILEGVQTLLQLSGCVARLCKINMQPQLFALPTK
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgtccaaagccgagtcttcaaaagctgctgccggcaacggtgccaagcccaatcccaat
gctgcggggggtgcaaactatgagctgccctgggttgaaaagtatcgtcctgtctacctt
gacgatgtcgtcggcaacacggaaaccatcgagcgcctcaagatcatcgccaaagatggc
aatatgccacacatgatcatctcgggcatgccaggtatcggcaagaccacgtccatcctc
tgcctcgcccgccaacttctcggtgacgcctacaaggaagccgttctcgagctcaacgcc
tccgatgaacgtggaatcgacgttgttcgcaaccggataaagggatttgcccagaagaag
gttacgctcgctccgggcaggcaaaagctggtgattctggacgaggcagacagcatgacg
agtggtgcacaacaggcgctgaggaggaccatggagatttacagtgccacgacacgattt
gcctttgcgtgcaaccagtccaacaagatcatcgaaccgctgcagtcgagatgcgccatc
ctccgatacgcccgcctcaccgatgcccaagtcgtgcgccgcattatgcaaattgtcgaa
gctgaagacgtgaaatactccgacgacggaattgcagccctggttttctccgcagagggt
gatatgcgacaagccatcaacaacctacaatcgacatttgccggcttcggcttcgttaac
ggggacaacgtattcaaggtggtggacagcccacaccccatcaaagtacaagccatgatc
aaggcatgccacgaacagcgcgtagacgatgccttgacatcgctcaaggaactctgggat
ctaggctactcatgtcacgacatcatcagcaccatgttcaaagtcacaaagacgattgac
acgctgagcgagcatgccaagttggaattcataaaggaaatcggtttcacacacatgcgc
attctggaaggcgtacaaacccttctccaactctccggctgcgtggctcgcctatgcaag
ataaacatgcaacctcagctctttgccctcccaacgaaatga

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