Pyrenophora teres: PTT_20176
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Entry
PTT_20176 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
pte
Pyrenophora teres
Pathway
pte03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PTT_20176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pte03009
]
PTT_20176
Ribosome biogenesis [BR:
pte03009
]
Eukaryotic type
Pre-60S particles
GTPases
PTT_20176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
D123
Motif
Other DBs
NCBI-ProteinID:
EFQ85029
UniProt:
E3SAH5
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MPVVPSDKLVSLQHAADGIRNICILAHVDHGKTSLTDALIATNGIISPKLAGKIRYLDSR
PDEQLRGITMESSAISLYFSLLRRSAPDAQPEQKEFLINLIDSPGHIDFSYEVSTASRLC
DGAVVLVDAVEGVCSQTVTVLRQTWIEKLKPLLVINKMDRLITELKMSPGEAYTHLSKLL
EQVNAVMGSFYQGERMEDDLRWREKMEERLNAAAEKTDTRSSSIQESADSIDMTNTPAEY
EEKDDEDIYFAPEKNNVIFGSAIDGWAFTVRQFASLYEKKLGIKRSILEKVLWGDFYLDP
KTKRVLSSKHLKGRHLKPMFVQLVLDNVWAVYEATTGGSNGKGDPTMVEKITKSLNLNVP
AHIMRSRDPRALLIALFAAWLPLSTALLVSVTEYLPPPSKAQTERMPDIIDSSPGADYVA
PKVRDAMVNFNASKDAPVVAYVSKMISVPSSELPQNKRRGGALTAEEAREMGRKKRAEIA
RQQALANGENADVSSVTDALGSAAISETETPVEETPVPDEEAEHLIGFARMFSGTLSVGD
EVYVLGPKFTPANPHAAPEPQKVKITALYLMMGRGLEPLTTVPAGVVFGIGGLEGHLLKS
GTLCSQLPGSLNLAGIQMGSEPIVRVALEPENPYDLDKMIKGLKLLVQSDPCAEYEQLPS
GEHVILTAGELHLERCLKDLKERFAKCEIQAGEPIVPYRESIVAAAEMAPLKDPNLPRGT
VIGETASKHVSVRLRVRPLPQPVTDFLSKNAGAIKKLYSERRAEDEGEHAPHRVHGAEDD
GIQEAEQREIGQSLSFDEFKKQLKQAFAEAKGQKEIWTDVIEKITAFGPRRIGPNILVDA
TKDGICGKALRDSISPTPAPEETPETSSTTTLTPYAFASTIAYAFQLATAQGPCCAEPVQ
GIAVFLEDVTLSLPPSSSDSSDASAHDRGRLTGEVIKAVRSAIHSGFLSWSPRMHLAMYS
CEIQASTDVLGRVYAVLTRRRGTILSETLSSTSSASTTGSQTFTINALLPVAESFGFSDE
IRKRSSGSASPQLRFAGFEMLDEDPFWVPFTEDQLEDLGELADRENVAKRYVDKVRRRKG
LRVQGEKVVVDAEKQKTLKR
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgttcccagcgacaagctggtgtcacttcaacacgcggccgatggaattagg
aacatctgcattctcgcccatgtcgaccatggcaagacatccctcacagacgccctcatc
gccaccaatggcatcatttcgcccaagctcgccggcaagatccgctacctcgactccaga
ccggatgagcagctgcgcggcatcaccatggagtcgtcggccatttcgctatacttttca
ctactccgccggtctgcgcccgacgcacagcccgagcaaaaggagtttttgataaacctg
atagactcgcccggccatatagactttagctacgaggtctctacagcatcgcgtctgtgc
gatggcgccgtcgtgctcgtagacgccgtagagggcgtgtgtagtcagaccgtgaccgtg
ttgcgccagacgtggatagagaagctcaagcctttgctcgtcattaacaagatggaccgg
ctaatcacagaactgaagatgagcccaggagaggcatacacacatctaagcaagttgctc
gaacaggtaaacgccgtcatgggcagcttctaccagggcgagcgcatggaggacgatctc
cgctggcgcgagaagatggaagagcgactaaatgctgcagccgagaagactgacacacgt
tcatcatccatacaagagtccgctgatagcattgacatgaccaatacacccgctgaatac
gaagaaaaagacgatgaagacatttactttgcccccgagaagaacaacgtcatttttggc
agtgccattgacggctgggcctttacggtaagacagtttgccagtctgtatgaaaagaaa
ctaggcatcaaacgttccatcctcgaaaaggtactctggggcgacttctacttagacccc
aagaccaagcgagtgctcagctccaagcatctcaaaggccgacacctgaagcccatgttc
gtacagcttgtcctagacaacgtatgggccgtctacgaggccactacgggaggtagcaac
gggaagggagatcctaccatggtcgagaagattaccaagtcgctcaatctcaatgtccca
gcccacattatgcggtctcgcgatccgagagctctcctaatagcactattcgcagcgtgg
ctccccttgtcaactgccctgttggtctctgttactgagtaccttcccccgccttccaaa
gcgcaaaccgaacgcatgcccgatatcatcgatagctctcctggcgccgactacgtagct
cccaaagtacgcgatgcaatggtcaacttcaacgcctcaaaggacgcccccgttgtggct
tatgtcagcaagatgatctcggtaccttcgagcgaactaccacagaacaagcgccgaggt
ggcgcactcacggctgaagaggcaagagagatgggtagaaagaagagagcggagatagca
cgacagcaggcacttgcaaacggcgagaatgcagatgtcagcagtgtcactgacgctctg
ggctccgcggctattagtgagaccgagacgccggttgaagagactccggtgcctgacgaa
gaagctgaacatctgattggatttgcccgtatgttttcgggtacccttagtgttggcgac
gaggtttacgtccttggtccaaaattcacccccgcaaaccctcacgccgctccggagcca
caaaaggtcaagatcactgctctgtacttgatgatgggacggggtctggagcctttgact
acggtacctgcaggtgtcgtctttggtatcggtgggctcgagggccaccttctaaagtct
ggcacactctgctctcagcttcccgggtccctcaatctcgcaggtatacagatgggtagc
gagcctattgtgcgtgttgcgttggaacctgagaacccttacgatctggacaagatgatc
aagggattgaaacttctcgtgcagagcgatccgtgtgcggagtacgagcagctgcctagc
ggagagcacgtcattctcacagctggtgagcttcatctcgagagatgtctgaaagatctc
aaggagagatttgcaaagtgtgagatacaagctggtgaaccaatcgtgccataccgagaa
tccatcgtcgccgccgctgagatggccccgctaaaagaccccaacctcccccgaggcact
gtcatcggagaaacagcaagcaagcacgtctctgtcaggctgcgagtccgcccacttcca
caacccgtaaccgatttcctaagcaagaatgctggcgcaatcaagaagttgtattctgag
cgccgtgctgaagacgaaggcgaacatgcaccacaccgagttcacggcgccgaagacgac
ggcatccaagaggcagaacagcgagaaatcggacagagtctaagtttcgacgaattcaag
aaacagctcaagcaagcttttgcagaggccaaaggtcaaaaagagatttggaccgatgtg
attgagaagattactgcgtttggaccgcgtcgtatcggccccaatattctggtcgatgca
accaaagacgggatatgtgggaaagccctccgtgactccatctcacccactcctgccccc
gaagaaacacccgaaacctcatcaaccacaaccctaaccccctacgccttcgcctccaca
atagcctacgccttccaactcgccacagcccaaggaccttgctgcgccgaacccgtccaa
ggcatcgccgtcttcctcgaagacgtcaccctttccctacccccatcttcatcagactcc
tccgacgcatccgcccacgaccgcggccgcctaactggcgaagtcataaaagcagtccgc
tcggcgatccactctggcttcctctcctggtccccacgcatgcatctcgcaatgtacagc
tgcgaaatccaagcctcaacagacgtcttgggtcgcgtctacgccgttctaacacgtcgc
cgcggtaccatcttgtctgaaactctctcctccacttcttcggctagtaccacaggctcc
cagactttcactatcaacgctttactcccggtagcagagagtttcggcttcagcgatgag
attcggaagaggagctccggcagcgcgagtccgcagttgcgctttgccggctttgagatg
ttggacgaggatccgttttgggttccgtttaccgaggatcagctcgaggatttgggagag
ctggcggatagggagaatgtggcgaagaggtatgtggacaaggtgaggcggaggaagggg
ttgagggtgcagggcgaaaaggttgttgtggatgcggagaagcagaagacgttgaagagg
tag
DBGET
integrated database retrieval system
