Piliocolobus tephrosceles (Ugandan red Colobus): 111519987
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Entry
111519987 CDS
T07491
Symbol
SYMPK
Name
(RefSeq) symplekin isoform X1
KO
K06100
symplekin
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03015
mRNA surveillance pathway
pteh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111519987 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111519987 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pteh03021
]
111519987 (SYMPK)
03019 Messenger RNA biogenesis [BR:
pteh03019
]
111519987 (SYMPK)
Transcription machinery [BR:
pteh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111519987 (SYMPK)
Messenger RNA biogenesis [BR:
pteh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
111519987 (SYMPK)
U7-dependent histone pre-mRNA processing factors
111519987 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
111519987
NCBI-ProteinID:
XP_023038132
Ensembl:
ENSPTEG00000037754
UniProt:
A0A8C9IX64
LinkDB
All DBs
Position
21:12045879..12094547
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AA seq
1276 aa
AA seq
DB search
MASGSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSSKDTRKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISSQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKTESVLIKRRLSAQGQAISVVGSLSSMSPLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFNSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGSLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPEAKEAPAGPLEEDDLEPLALALAPAPAPRPPQDL
IGLRLAQEKALKRQLEEEQKLKPGGMGAPSSSSSSLSPSARPGPPPSEEAMDFREEGPEC
ETPGIFISMDDDSGLTEAALLDSSLEGPLPKETAASGLTSKEERSPQTLAPIGEDVVKTP
SPAAEDAREPEAKGNS
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtggcagtggggacagcgtcacccgccggagtgtggcatcacagtttttcact
caagaggaggggccgggaattgatggcatgaccacctcagagagggtggtggatcttctg
aaccaggcggcgctgatcaccaatgactcaaagatcacagtgctcaaacaggttcaggag
ctgatcatcaacaaagaccccacactactggacaacttcctggacgagatcatcgcattc
caagcagacaagtcaatcgaagtgcgaaaatttgtcatcggcttcatcgaggaggcatgc
aagcgagacattgagttgctgctgaaactcattgcaaacctcaacatgctcttgagggac
gagaatgtgaacgtggtgaagaaggccatcctcaccatgacccaactttacaaggtggcc
ctgcagtggatggtgaagtcacgggtcattagcgagctgcaagaggcctgctgggacatg
gtatctgccatggcgggggacatcatcttactgttggactctgacaatgacggcatccgc
acccatgctatcaagtttgtggagggcctcattgtcaccctgtcaccccgcatggctgac
tccgagataccccgacgccaggagcatgatatcagcctggaccgcattcctcgtgaccac
ccctacatccagtacaacgtactatgggaagagggcaaggcagccttggagcagctgctt
aagttcatggtgcaccctgccatctcttccatcaatctgaccacagcgctgggctccctc
gccaatatcgcccgccagagacccatgttcatgtctgaggtgatccaggcctatgaaact
ctgcatgccaacctgcccccgacgctggcgaaatcgcaggtgagcagcgtgcggaagaat
ctgaagctgcacctgttgagtgtgctgaagcacccagcctccttggagttccaggcccag
atcaccaccctgctggtggacctgggcacacctcaggctgagatcgcccgcaacatgccg
agcagcaaggacacccgcaagcggccccgcgatgactcggactccacactcaagaagatg
aagctggagcccaaccttggggaggacgatgaggacaaggacttggaaccaggcccatca
gggacctcaaaggcctcagcccagatctccagccagtcagacacagacatcacagctgag
ttcctgcagcctctgctgacgcctgataatgtggccaatctggtcctcatcagcatggtg
tacctgcccgaggccatgccagcctctttccaggccatctacacccctgtggagtcagca
ggcacagaagcccagatcaagcacctggctcggctcatggccacacagatgacagctgcc
ggactgggaccaggtgtagagcagaccaaacagtgcaaggaggagcccaaggaggagaag
gtggtgaagacggagagtgtcctgatcaagcggcgcctgtcagcccagggccaagccatc
tcggtggtgggctccctgagctccatgtcccctctggaggaagaggcaccgcaggccaag
aggaggccagagcccattatccctgtcactcagccccggctggcaggcgctggtgggcgc
aagaagatattccgtctcagcgacgtgctgaagcccctgactgatgcccaggtggaagcc
atgaagctgggcgctgtgaagcggatcctgcgggctgagaaggctgtggcctgcagcggg
gcagcccaggtccgcataaagatcttggccagcctggtgacacagttcaactcgggcctg
aaggcagaggtcctgtccttcatcctggaggatgtgcgggcccgcctggacctggccttc
gcctggctctaccaggagtacaacgcctatctggccgcgggtgcctcaggctccctggac
aagtatgaggactgccttatccgcctgctgtccggcctgcaggagaaaccagaccagaag
gatgggatcttcaccaaggttgtgctggaagcgccacttatcacagagagtgccctggag
gtgatccgcaagtactgcgaggatgagagtcgcacctatctgggcatgtccacacttcga
gacctgatcttcaagcgcccgtcccgccagttccagtacctgcatgtccttctcgacctc
agctcccatgagaaggacaaggtgcgctcccaggccctgctgttcatcaaacgcatgtat
gagaaggagcagctgcgggagtatgtagagaaatttgccctcaactacctgcagctcctg
gtgcaccccaacccaccgtctgtgctgtttggagctgacaaagacacagaggtggcagcg
ccctggacggaggagacagtgaagcagtgtctctacctctacctggctctcctgcctcag
aaccacaagctgatccacgagctggcggccgtgtacactgaagcgatcgccgacatcaag
cggacggtgctgagggtcatcgagcagccgatccgaggaatgggcatgaactccccggag
ctgctcctgctggtggaaaactgtcccaagggggcagagacactggtcacacgatgtctg
cacagcctcacagacaaagtcccaccctccccggagctggtgaagcgggtccgggatctc
taccacaagcgactgccagacgtccgcttcctcatcccggtgctcaatgggctggagaag
aaagaggtgatccaggccctgcctaaactcatcaaactcaaccccatcgtggtgaaggaa
gtcttcaaccgcctgctgggcacccagcatggtgagggaaactcagccttgtccccgctg
aaccctggagagctcctgatcgcattacacaacatcgactctgtgaagtgtgacatgaaa
tccatcatcaaagccaccaatctgtgctttgcggagcggaacgtgtacacgtcagaggtg
ctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatcttg
tcccgcctcatcatgaagcaggtgtggaagtaccccaaagtgtgggagggcttcatcaag
tgctgccagcgcaccaagccccagagcttccaggtcatcctgcagctgccgccccagcag
ctgggagccgtctttgacaagtgccctgagctccgggagcctctgctggcccatgtccgc
tccttcaccccccaccagcaagctcatatccctaactccatcatgaccatcttggaggcc
agcggtaagcaggagccagaagccaaggaagcgcctgcggggcccttggaggaggacgac
ctggagcctctggccttggccttggccccggccccggccccccggcccccgcaggacctc
attggcctgcggctggcccaggagaaggccttaaagcggcagctggaggaggagcagaag
ctgaagccgggaggaatgggagccccctcctcttcctcctcctctctctctccctcggcc
cggccgggcccgcccccgtctgaggaagccatggatttccgggaggaggggcctgagtgc
gagaccccgggcatcttcatcagcatggatgacgactcggggctgaccgaggctgcgctg
ttggactctagtctcgagggccccctacccaaggagacggcagcgagcgggctgacctct
aaggaggagcggagtccccagaccctggcacctattggagaagatgtcgtgaagacccct
agcccggctgctgaggacgccagggaacccgaggccaaggggaacagctga
DBGET
integrated database retrieval system
