Piliocolobus tephrosceles (Ugandan red Colobus): 111520496
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Entry
111520496 CDS
T07491
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain isoform X1
KO
K24357
collagen type XX alpha
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
111520496 (COL20A1)
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Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
Ig_DSCAM-DSCAML_C
DUF4959
Fn3_Dep-1_2nd
Motif
Other DBs
NCBI-GeneID:
111520496
NCBI-ProteinID:
XP_023039030
Ensembl:
ENSPTEG00000003375
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All DBs
Position
20:36103439..36144925
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AA seq
1284 aa
AA seq
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MSSRAPAHLGLCLWLWLSTTLGREPGQASGHLRLTVLPEDRLQMKWRESEGSGLGYLVQV
QPMAGDSEQEVILTTKTPKATVGGLSPSKGYTLQIFELTGSGRFLLARREFVIEDLKSSS
LDRNNQRPLSSGALEPTPSLMGSPDPEQASEPQVAFAPSRDPPIPASPQFRCLPPVPADM
VFLVDGSWSIGHSHFQQVKDFLASVIAPFEIGPDKVQVGLTQYSGDAQTEWNLNSFGTKE
QVLAAVHRLRYKGGNTFTGLALTHVLGQNLQPAAGLRPEAAKVVILVTDGKSQDDVHTAA
RVLKDLGVNIFAVGVKNADEAELRLLASPPRDITVHSVLGFPQLATLAGLLSRLVCQRLQ
DGGPRRGPAAAPALDTLPAPTSLVLSQVTSSSIHLSWTPAPRLPLKYLIVWRASRGGTPR
EVVVEGPATSAELHNLTSRTEYLVSVFPIYEGGVGEGLRGLATTAPLSPPRALTLAAVTP
RTVHLTWQPSAGATHYLVRCSPASSKGEEEEREVQVRRPEVLLDGLEPGRDYEVSVQSLR
GPESSEARGIRARTPILAPPRHLGFSDVSHDAARVIWEGTPRPMRLVRVTYVSSEGGHSG
QTEAPGNATSATLGPLSSSTTYTVRVTCLYPGGGSSTLTGQVTTKKVPSPSQLSVTELPG
DAVQLAWVAAAPSGVLVYQIKWTPLGEGKAHEISVPGNLGTAVLPGLGRHTEYDVTILAY
YRDGARSDPVSLRYTPSTVNRSPPSNVALASETPDSLQVSWTPPRGRVLHYRLTYAPASG
SGPEKSVSVPGPRSHVTLPDLQAATKYRVLVSAVYAAGRSEAVSATGQTACPALRPDSSL
PGFDLMVAFGLVEKAYASIRGVAMEPSAFGGTPTFTLFKDAQLTRRVSDVHPAPLPPEHT
IVFLVRLLPETPREAFALWQMTAEDFQPVLGVLLDAGRKSLTYFHRDPRAALQEATFDPQ
EVRKIFFGSFHKVHVAVGRSKVRLYVDCRKVAERPLGEVGSTPSAGLITLGRLAKARGPR
SSSAAFQLQTLQIVCSDTWADEDQCCELPASRDGETCPAFVSACSCSSQTPGPPGPQGPP
GLPGRNGTPGEQGFPGPRGPPGVKGEKGDHGLPGLQGHPGHQGIPGRVGLQGPKGMRGLE
GTAGLPGPPGPRGFHGMAGARGTSGERGPPGAVGPTGLPGPKGERGEKGEPQSLATLYQL
VSQASHVSKFDSFHENTRPPMPILEQKLEPGTEPLGSPGTRSQALLPGEWEHGSRRLQGR
GEPGAVGQTGSPGQQGASTQGLWE
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccgagcccctgcacacctcggcctctgcctctggctgtggctgagcaccacc
ctgggaagagagccaggacaagcaagtggccacctgaggctgactgtgctgcctgaggac
cggctgcagatgaagtggagagagtcggaggggagcggcctcggctacctggtgcaggtt
cagcccatggcaggggactcggaacaggaggtgatactgaccaccaagacccctaaggcc
acagtggggggcctgagcccctccaagggctacaccttgcagatcttcgagctcactggc
tctgggcgcttcctgctggctcggagggagtttgtgattgaggatctgaagagtagctcc
ttggacaggaacaaccagagacctctcagctctggagccctggagcccaccccctccctc
atggggagcccagacccagagcaggcttccgagccccaagttgccttcgcgccaagccgg
gatccgcccattcccgccagcccccagttccgctgcctaccccctgtgcctgctgacatg
gtcttcctggtggacgggtcctggagcattgggcacagtcacttccagcaggtcaaggac
ttcctggccagcgtcattgcaccctttgaaatcgggccggataaggtccaagtaggcctg
actcagtacagtggcgatgcccagactgagtggaacctgaactccttcggcaccaaggag
caggtgctggcagctgtgcaccgcctccgctacaagggggggaacacgttcacaggcctc
gccctgacccacgtgctggggcagaacctgcagccggcggccggcctccgtccagaggcg
gccaaggtggtgattctggtgacggacggcaagtcccaggacgatgtgcacactgctgcc
cgtgtcctcaaggacctgggcgtgaacatctttgctgtgggtgtgaagaacgccgatgag
gctgagctgaggctcctggcgtccccgccgcgggacatcaccgtccacagcgtgctgggc
ttcccgcagcttgccacgctggccggcctgctcagccgcctcgtctgccagaggctgcag
gatgggggcccgcggcggggcccagcagcggctccagccctggacaccctccccgccccc
accagcctggtcctgagccaggtgacctcctccagcatccacctgtcctggacaccagcc
ccccggctccccctcaagtatctgattgtttggcgagcctccagaggtggcacccccagg
gaggtggtggtggaggggcctgccacctccgcagagctgcacaacctgacctcccgcacg
gagtacctggtctccgtgttccccatctacgagggcggggttggcgagggcctgcggggc
ctggcgaccacagcacctctgtctccgccccgggcgctgaccctggccgcagtgacgccc
agaactgtccacctcacctggcagccctcagccggggccacccactacctggtgcgatgc
tcacctgcttcctccaagggtgaggaggaggagcgagaggtgcaggtgaggcggcccgag
gtgctgctggatggcctggaaccaggcagggactatgaggtctcggtgcagagcctgcga
ggccctgagagcagcgaggcccggggcatccgtgccaggacccccatcctggcccccccg
agacacctgggcttctcagacgtgagccacgacgcggcgcgagtgatctgggagggcacc
ccaaggcctatgcgcctggtcagagtcacctatgtctccagcgagggtggacactcgggg
cagacagaggctcctgggaacgccacctcggccacactggggcccctctcttcctccacc
acctacactgtccgcgtcacctgcctctaccctgggggtggctcctctacgctgaccggc
caggtcaccaccaagaaagttcccagcccaagccaactgtccgtgacggagctgccaggg
gacgcagtccagctggcgtgggtggccgcagccccatctggcgtgcttgtctaccagatc
aagtggacgcccctgggagaggggaaggctcacgagatctctgtcccagggaacctcggc
acggccgtcctgcctggcctagggaggcacacggagtacgacgtcaccatcctggcctac
tacagggacggggcccgcagtgaccccgtgtccctccgctataccccctccacagtgaac
aggagccccccctccaacgtggccctggcctcggagacccccgacagcctgcaggtcagc
tggacacccccacgtggccgcgtgctccactaccggctcacctacgcgcccgcctctggc
tcgggacctgagaaatccgtctccgtgccaggacccaggagccacgtgacactccccgac
ctgcaggcagccaccaagtacagggtcctggtctcagctgtctacgcagcaggcaggagc
gaggctgtgtctgccacaggccagacagcctgcccagccctccgccctgacagctccctc
ccagggtttgacctgatggtggccttcggcctggtggaaaaggcttacgcttccattcgg
ggcgtggccatggagccctctgccttcggtgggaccccaaccttcacgcttttcaaggac
gcccagctgacaagacgggtcagtgacgtccacccagccccgctccctccagagcacacc
atcgtcttccttgtgcgcctgcttcccgagacgccccgtgaggcctttgcgctgtggcag
atgacggccgaggacttccagcccgtcctcggggttctgctggatgccgggaggaagtcc
ctgacctacttccaccgcgaccccagggctgccttgcaggaggccaccttcgacccgcag
gaagtgaggaagattttcttcgggagcttccacaaggtgcacgtggctgtgggccgctcc
aaggtcaggctctatgtggactgccggaaggtggctgagcggcccctcggggaggtgggc
agcacaccctctgccggcctcatcacgctggggaggctggccaaggccaggggcccccgg
agcagctcggccgcgtttcagctccagacactgcagatcgtgtgcagtgacacctgggcc
gacgaggaccagtgctgtgagctccctgcctcgagggatggagagacctgcccggccttc
gtgtctgcctgctcctgttcctcacagacccctgggcccccagggccccagggcccccca
ggcctccctgggaggaacggcactccaggagagcagggcttcccagggcccaggggtcca
ccaggggtcaaaggagagaaaggagaccatgggctcccaggcttgcagggccaccccggc
caccagggcatccctgggagagttggcctccagggaccaaagggaatgagaggcctggag
ggaactgctggcctgcccggacctcctggccccagggggttccacggcatggcaggggcc
aggggcactagtggagagcgaggacccccaggggccgtggggcccacagggctgccgggg
cccaaaggggaacgaggagagaagggcgagccacagtcccttgccaccctctaccagctt
gtgagccaggcctcacacgtgtcaaagtttgactccttccacgagaacaccaggccccca
atgcccatcttggagcagaagctggagccgggcactgagcccctggggtcccctggcacc
cgcagccaggccctgcttcctggagaatgggagcatggtagccgccgcctacagggcaga
ggggagcctggagccgttggtcagacaggcagccctgggcagcagggggctagcacccag
ggcctctgggagtga
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