Piliocolobus tephrosceles (Ugandan red Colobus): 111521304
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Entry
111521304 CDS
T07491
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03030
DNA replication
pteh03420
Nucleotide excision repair
pteh03430
Mismatch repair
pteh03440
Homologous recombination
pteh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111521304 (RPA1)
03420 Nucleotide excision repair
111521304 (RPA1)
03430 Mismatch repair
111521304 (RPA1)
03440 Homologous recombination
111521304 (RPA1)
03460 Fanconi anemia pathway
111521304 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pteh03000
]
111521304 (RPA1)
03032 DNA replication proteins [BR:
pteh03032
]
111521304 (RPA1)
03400 DNA repair and recombination proteins [BR:
pteh03400
]
111521304 (RPA1)
Transcription factors [BR:
pteh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111521304 (RPA1)
DNA replication proteins [BR:
pteh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111521304 (RPA1)
DNA repair and recombination proteins [BR:
pteh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111521304 (RPA1)
MMR (mismatch excision repair)
111521304 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
111521304 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
111521304
NCBI-ProteinID:
XP_026305406
Ensembl:
ENSPTEG00000006457
LinkDB
All DBs
Position
16:1643943..1707491
Genome browser
AA seq
615 aa
AA seq
DB search
MVCQLSEGAIAAIMQQGETSMKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEQERLSSNCVCQIHRFIVNTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNE
GHGQPQAAPPVSAGSPAASSKPQQQHGSSGAGSTVSKAFGASKTFGKAGGPSLSNTSGST
QSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRAAAFNE
QVDKFFPLIEVNKVYYFSKGTLKIANKQFTAIKNDYEMTFNNETSILPCEDDHHLPTVQF
DFTGIDDLESKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATL
WGEDAEKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQ
ALDGVSISDLKSGGVGGANTNWKTLYEVKSENLGQGDKPDYFTSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVVDVKPVDYR
EYGRRLVLSIRSASM
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtctgccaactgagcgagggggccattgcggccatcatgcagcagggggagacgtcc
atgaagcccatcctccaagtcatcaacatccgtcccattactacggggaatagtccgccg
cgttatcgactgcttatgagtgatggattgaacactctgtcctctttcatgttggcaaca
cagttgaacccccttgtggagcaagaacgactgtccagcaactgtgtttgccagattcac
cgatttatcgtgaacactctgaaagacggaaggagagtagttattttgatggaattagaa
gttttgaagtccgctgaagcagttggagtaaagattggcaatccagtgccctataatgaa
ggacacgggcagccacaagcagctcctccagtgtcagcaggcagcccagcggcaagcagc
aagccccagcaacagcacggaagctcgggagcgggttccactgtttctaaggcttttggt
gcttcaaagacatttggaaaagctggaggtcccagcctgtcaaacacttctgggagcaca
cagtccaaagtggtgcccattgccagcctcactccttaccagtccaagtggactatttgt
gctcgtgtcaccaacaaaagtcagatccgtacctggagcaactcccgaggggaagggaag
cttttctctctagaactggttgatgaaagtggtgaaatcagagctgcagctttcaacgag
caagtggacaagttctttccacttattgaagtgaacaaggtgtattatttctcgaaaggc
actctgaagattgctaacaaacagttcacagctattaaaaatgactacgagatgaccttc
aacaacgagacttccatcctgccctgtgaagacgaccatcatttacctacggttcagttc
gatttcacggggattgatgacctcgagagcaagtcgaaagactcactcgtagacatcatc
gggatctgcaagagctacgaagatgccactaaaatcacagtgaggtctaacaacagagag
gttgccaagaggaacatctacctgatggacacatctgggaaggtggtgactgccactctg
tggggggaagatgctgaaaaatttgatggttctagacagcccgtgttggctatcaaagga
gccagagtctctgatttcggtggacggagcctctccgtgctgtcttcaagcactatcatt
gcgaatcctgacatcccagaggcctacaagcttcgtggttggtttgatgcagaaggacaa
gccttagatggtgtttccatctctgatctaaagagcggcggagttggaggggccaacacc
aactggaaaaccctgtacgaggtcaaatccgagaacctgggccaaggcgacaagccggac
tacttcacttctgtggcgacagtggtgtatcttcgcaaagagaactgcatgtaccaagcc
tgcccgactcaggactgcaataagaaagtgattgatcaacagaacgggttgtaccgctgt
gagaagtgcgacacggaatttcccaatttcaagtaccgcatgatcctgtcagtaaatatt
gcagattttcaagagaatcagtgggtgacttgtttccaggagtctgctgaagctatcctt
ggacaaaatgctgcttatctgggggaattaaaagacaagaacgaacaggcatttgaagaa
gttttccagaatgccaacttccgatctttcatattcagagtcagggtcaaagtagagacc
tacaacgacgagtctcgaattaaggccactgtggtggacgtgaagccggtggactacaga
gagtacggccgaaggctggtcctgagcatcagaagcgcgtcgatgtga
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