Piliocolobus tephrosceles (Ugandan red Colobus): 111524209
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Entry
111524209 CDS
T07491
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03440
Homologous recombination
pteh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111524209 (PALB2)
03460 Fanconi anemia pathway
111524209 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pteh03400
]
111524209 (PALB2)
DNA repair and recombination proteins [BR:
pteh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
111524209 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
111524209 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
111524209
NCBI-ProteinID:
XP_023045096
Ensembl:
ENSPTEG00000017135
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All DBs
Position
17:complement(21952280..21989091)
Genome browser
AA seq
1194 aa
AA seq
DB search
MTVPATFKDLDDGEKQRTQCENTVLKEKLAFLKREYSKTLARLQRAQRAEKVKHSIKKTV
EEQDCLSQQELSPQLNHSEPKNKICVYDNLHIKTHLDEETGEKTSVTLDVGPESFNPGDG
PGGLPIHRTDDTQEHFPHRVSDPDGEQKQKLPGRRKQQQKRTFISQERDCVFGTDSLRLS
GKRLKEQEETSSKNPARSPVTEIRTHLLSLKSELPDSPEPVTETNEDSVFIPPTAQPEKG
VDTLPKRPDFTRATTVPLQTPTDSSSSQHLEHIPPKGSSELTTHGLKNIRFTSSVSLEAQ
DKKVTVPTDNLVVNKAVSKSGQLPTSSNLEAGISCSLNELTHNNLPANENQNLEQNHTEK
SLKSPSDALDGRNENLQENEILSQPKSLSLEATSLLSAEKHSCTMPEGLLFPAEYYVRTT
RSMSNCQRKVTLEAVIQSHLDVKKKGFKNKNKDASKNLNLSNEETDQSEIRMSDTCTGQP
SSRTSQKLLSLTKVSSPAGPTEDNDLSRKAVAQEPSRRYRGKRKSACTPASDHCEPLLPA
CNPSVINRSKEEVTSHKYQNKKAVTQVKGKKSHQKEDSLSWSNSAYLSLDNDAFTDSFHK
DGMLSLKQLLSFLSITDFQLPDEDFGPLKLEKLKSCSEKPVEPFESNMFGERHLKEGNCI
FPEELSPKRMNTEMEDLEEDLIVLPGKSHPKRPNPQSQHTKTGLSSSILLYTPLNTVALD
DNDRPTADMCSPLFPILGTTPAFGPQGSYEKASTEVAGQTCRTPQLAHLKDSVCLASDSK
QFDSSSSPAKPHTTLQVSGRQGQPTCDCDSTLPGTPPPIESFTFKENQLCGNTCQELHKH
SVEQTETAELPASDSINPGYLQLVSKLKNPSGSCSVDVSAMFWERAGCKEPCIITACEDV
VSLWKALDAWQWEKLYTWHFTEVPVLQIVPVPDVYNLVCVALGNLEIREIRALLCSSDDE
SEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETIL
TFAEVQGMQEALLGTTVMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVL
SHPCAKESESLQSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRQVFLEGDVKDHCAAAIL
TSGTIAIWDLLLGQCTALLPPISDQHWSFVKWSGTDSHLLAGQKDGNIFVYRYS
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgacagtccctgctaccttcaaggatctggatgatggggagaaacagagaacacagtgt
gagaatactgtgttaaaggagaaattagcattcttgaaaagggaatacagcaagacacta
gcccgtcttcagcgtgcccaaagagctgaaaaggttaagcattctattaagaaaacagta
gaagaacaagattgtttgtcccagcaggagctctcaccgcagctaaaccactcagaacct
aaaaataaaatatgtgtttatgacaatttacacatcaaaacccatcttgatgaagaaact
ggagaaaagacatctgtcacacttgatgttgggcctgagtcctttaaccctggagatggc
ccaggaggattacctatacacagaacagatgacacccaagaacattttccccacagggtc
agtgaccctgatggtgagcaaaagcagaagctgccagggagaagaaagcagcagcagaag
agaacatttatttcacaagagagagactgtgtctttggcactgattcactcagactgtct
gggaaaagactaaaggaacaggaagaaaccagtagcaaaaatcctgctagatcaccagta
actgaaataagaactcaccttttaagtcttaagtctgaacttccagattctccagaacca
gttacagaaactaatgaagacagtgtattcattccaccaactgcccaaccagaaaaaggt
gtggatacactcccaaaaagacctgatttcaccagggcgactacagttcctttacagact
ccaacagatagcagtagtagtcagcaccttgaacacattcctcccaaaggcagcagtgaa
cttactactcacggcctaaaaaacattagatttacttcatctgtaagtttggaggcacaa
gacaaaaaagtgactgtccctacagataacctcgttgtaaacaaagctgtaagtaaaagt
ggccaactgcccacaagttctaatttagaggcaggtatttcatgttctctaaatgaactc
actcacaataacttgccagcaaatgaaaatcaaaacttagaacaaaatcatacagagaaa
tctttaaaatctcccagtgacgctcttgatggtagaaatgaaaatcttcaggaaaacgag
attctaagtcaacctaagagtcttagcctggaagcaacctctcttctttctgcagaaaaa
cattcttgcacaatgcctgaaggccttctgtttcctgcagaatactatgttagaacaaca
cgaagcatgtccaattgccagagaaaagtaaccctggaggctgtcattcagagtcatttg
gatgtcaagaaaaaagggtttaaaaataaaaataaggatgcaagtaaaaatttaaacctt
tccaatgaggaaactgaccaaagtgaaattaggatgtctgacacatgcacaggacaacca
agttcaagaacttctcagaaacttctctcattaactaaagtcagctctcccgctgggccc
actgaagataatgacttgtctaggaaggcagttgcccaggaacctagtagaagatacaga
ggaaaaagaaaatcagcctgcaccccagcatcagatcattgtgaaccacttttgccagct
tgcaacccatcggttattaacaggtccaaggaggaagtcacctcacataaatatcagaac
aaaaaagcagttactcaagtgaaagggaagaaaagtcatcaaaaagaggattccctttct
tggagtaatagtgcttatttatccttggataatgatgctttcacggattcatttcataag
gatggaatgctgagcttaaagcaactactgtcttttctcagtatcacagactttcagtta
cctgatgaagactttggacctcttaagcttgaaaaactgaagtcttgctcagaaaaacca
gtggagccctttgaatcaaacatgtttggagagagacatcttaaagagggaaattgtatt
tttccagaggaactgagtcctaaacgcatgaatacagaaatggaggacttagaagaggac
cttattgttctgccaggaaaatcacatcccaaaaggccaaacccacaaagccagcataca
aagacaggcctttcttcatccatattactttatacgcctttaaatacagttgcgcttgat
gataatgacaggcctactgcagacatgtgttcacctcttttccctatcttaggcactact
ccagcctttggtcctcaaggctcctatgaaaaagcttccacagaggtcgctggacaaact
tgccgcacaccccaacttgctcatttgaaagactcagtctgtcttgccagtgatagtaaa
caattcgacagttcaagcagtccagcaaaaccacataccaccctgcaggtgtcaggcagg
caaggacaacctacctgtgactgtgactctaccctgccgggaacacctccacccattgag
tcattcacttttaaagaaaatcagctctgtggaaacacatgccaggagttgcataaacat
tccgtcgaacagactgaaacagcagagcttcctgcttctgatagcataaacccaggctac
ctacaattggtttcaaagttaaagaatccttcaggttcctgttccgtagatgtgagtgcc
atgttttgggaaagagccggttgtaaagagccatgtatcataactgcttgcgaggatgta
gtttctctttggaaagctctggatgcttggcagtgggaaaaactttatacttggcacttc
acagaggttccagtattacagatagttccagtgcctgatgtgtataatcttgtgtgtgta
gctttgggaaatttggaaatcagagagatcagggcattgctttgttcctctgatgatgaa
agtgaaaagcaagtactactgaagtctggaaatataaaagctgtgcttggcctgacaaag
aggaggctagttagtagcagtgggaccctttctgatcaacaagtagaagtcatgacattt
gcagaagatggaggaggcaaagaaaaccaatttttgatgccccctgaggagactatatta
acttttgccgaggtccaagggatgcaagaagctctccttggtactactgttatgaacaac
attgttatttggaatttaaaaactggtcagctcttgaaaaagatgcacattgatgattct
taccaagcgtcagtctgtcacaaagcctattctgaaatggggcttctgtttattgtcctg
agtcatccctgtgccaaagagagtgagtcgttgcaaagccctgtgtttcagctgattgtg
attaaccctaagacgactctcagtgtgggtgtgatgctgtactgtcttcctccagggcag
gctggcaggcaagtgttcctggaaggtgacgtgaaagatcattgtgcagcagcaatcttg
acttctggaacaatcgccatttgggacttacttctcggtcagtgtactgccctcctccca
cctatctctgaccaacattggtcttttgtgaagtggtcaggtacagactctcatttgctg
gctggacaaaaagatggaaatatatttgtataccgctactcataa
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