Piliocolobus tephrosceles (Ugandan red Colobus): 111526143
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Entry
111526143 CDS
T07491
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pteh03019
]
111526143 (FOCAD)
Messenger RNA biogenesis [BR:
pteh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111526143 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
111526143
NCBI-ProteinID:
XP_023047477
Ensembl:
ENSPTEG00000013398
UniProt:
A0A8C9GWL7
LinkDB
All DBs
Position
14:complement(58967000..59284971)
Genome browser
AA seq
1801 aa
AA seq
DB search
MSDDIRKRFEFPNSLIQSQAVGHLIAAVLKENGFSEKIHQSTNQTPALNLLWEKCCSDNV
VVRTACCEGLVALVAQDHAEFSYVLNGILNLIPSTRNTHGLIKAIMKLLQMQALKEGQGG
ERNIQNIYTIRNHPHPLITVLEHRPDCWPVFLQQLTAFFQQCPERSEVSCIQIMAPFLWY
LYCEPSQLQEYAKLRLALLKVLLQPQVLCDKDQPSILEQQILQLCCDMVPCLQIKDLIQT
TEAMMFIEEVYLSLLRHPVFWKIQLTQMTLQLLCVCEVSLKITGECSSLIHLLEHSVELL
KEDFPVELVIIGIALLLLQTPASQQKPILNLALKLLSVTEDQKIPKSSLLLVMPILQILS
STALEDCISMDEEGPSRQQLALNLLEMIQRECYRDDHQKLSYKLACPVTSVYGSIFTAWR
ILEVMRDSSAASDWLTSVESLLPITTVIPVPAFLLLAHLLVEDKGQNLHQILKVTTELAQ
ADSSQVPNLIPVLMFKLGRPLEPILYNDILYSLPKLGVHKVCVGQILRVIQLLGTTPRLR
AVTLRLLTSLWEKQDRVYPELQRFMAMSDVPSLSVGKEVQWEKLIAKAASIRDICKQRPY
QHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR
PLILKTLSELFSLVPSLTVNTTEYENFKVQVLSFLWTHTQNKDPIVANAAYRSLSNFSAA
EHTILHLPEKIRPEIPIPEELDDDEDDEDVDLSVPGSCYLKLLSLTPPLVLPALEEFFTS
LVKQEMVNMPRGIYHSALKGGARSDQGKTVAGIPNFILKMYETNKQPGLKPGLAGGMLFC
YDVSMYQSKDGKPLNRLMASRGRSFKQTSLALVHEVHIQLSEWHRAIFLPQAWLAYMSRA
YHAILQGRLGELELQLKHGKEEPEEVQYKKSTAWLWVRDMLTDEITKAAAKESPVVKGNA
LLALSSLAVVVSRHETSLSSDSDGLLEVQPNFLSMKEWISMVLDTLLVIVDSHYQPRGQL
LSWFYYKSYSGENTASAIARSAAATALSLLVPVFIISCKEKVEEILNMLTARLPGKPSAD
ESQAVQIHMGLALGMFLSRLCEEKLSDISGQEMNLLLMKSLDALENCCFDTSLEYNTGCI
LGVGLVLSLMSHSSQMQSRVHVAASLRKLSAYLDDSGSQSRTFQEVLAYTLSCVCTSAFS
TGIIEAAEAEDVMNKLRLLVENSQQTSGFALALGNIVHGLSVCGHGKAEDLGSKLLPAWI
RIVLTEGTPTMLCLAALHGMVALVGSEGDVMQLKSEAIQTSHFQGRLNEVIRTLTQVISV
SGVIGLQSNAIWLLGHLHLSTLSSSQSRASVPTDYSYLPESSFIGAAIGFFITGGKKGPE
SVPPSLLKLVMKPIATVGESYQYPPVNWAALLSPLMRLNFGEEIQQLCLEIMVTQAQSSQ
NAAALLGLWVTPPLIHSLSLNTKRYLLISAPLWIKHISDEQILGFVENLMVAVFKVGSPL
GNPELCPSALQGLSQAMKLPSPAHHLWSLLSEATGKIFDLLPNKIRRKDLELYISIAKCL
LEMTDDDANRIAQVTKSNIEKAAFVKLYLVSQGRFPLMDLTDMLSVAVQHREKEVLAWMI
LHSLYQARIVSHANTGVLKRMEWLLELMGYIRNVAYQSTSFQNMALDEALDFFLLIFATT
VVAWADHAAPLLLGLSASWLPWHQENGPAGPVPSFLGRSPMHRVTLQEVLTLLPNSMALL
LQKEPWKEQTQKFIDWLFSIMESPKEALSAKSRDLLKATLLSLRVLPEFKKKAVWTRAYG
W
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgatatcaggaaaaggtttgaatttccaaattctcttatccaatcacaggct
gtgggtcatcttattgctgcagtcctaaaggaaaatggtttttcagaaaagattcaccag
tctacaaatcagactcctgctttgaacttgctgtgggagaagtgttgcagtgacaatgta
gtggttcgaacagcctgctgtgaaggtctggtggcactcgttgctcaggatcatgcagag
ttcagctatgttctcaatgggatactcaacctgattccatcaaccagaaatacacatggc
ttgataaaagccattatgaaattactacaaatgcaagctcttaaggaaggacaaggtggg
gaaaggaatattcagaatatatataccattagaaatcatcctcatcctttgatcactgtg
cttgaacacagacctgattgctggccagtatttttgcagcagctgacagcgtttttccag
cagtgccctgaaaggtcagaagtttcatgcattcaaataatggcaccatttctgtggtat
ctgtattgtgaaccatctcagttacaagaatatgctaaactccgactagccctgctgaaa
gtcttacttcaaccccaggttctttgtgacaaagatcaaccatcaatactggaacagcag
atacttcaactgtgttgtgacatggttccgtgtttgcagataaaagatttgatacagaca
acagaagcgatgatgtttattgaggaagtatatttaagccttttgcgtcatcctgttttc
tggaaaattcagcttacccagatgactcttcagctgctgtgtgtctgtgaagtcagctta
aagataactggcgaatgttcatctttaattcaccttttagagcacagtgttgaacttctg
aaggaggattttcctgttgaactggtcatcattggaatagctttactacttctacagact
ccagcaagtcagcagaagccaatcttaaatctagctttgaagctcctctctgttactgag
gatcagaaaatcccaaagtcttctctgctgttagtgatgccaattctgcagatactatct
tctactgccttggaagactgtatatctatggatgaagaaggtccctctaggcagcagttg
gctctgaaccttttggaaatgatacagcgggaatgttacagagatgaccaccaaaagctc
tcctacaagcttgcgtgccctgtaaccagtgtgtatggttcaatatttacagcctggagg
attcttgaagtaatgagagactcgtctgctgcaagtgactggttgacttcagtagagtca
ttgcttcctattactactgtgatccctgtgcctgcttttcttctgctggctcacctcctt
gttgaagacaaaggacagaatcttcaccaaatactgaaggtcactacagaattagcccaa
gcagattcctcccaggtgccaaatctgattccagttttgatgttcaaattgggaagacca
ctggaacctatattatataatgatatattgtatagtttacctaagcttggtgttcacaag
gtgtgtgtaggacaaattctacgagtaatacaactacttggaaccaccccacgactaaga
gctgtcactttgcgtttgctgacatcattgtgggaaaagcaggaccgagtctatcctgaa
ctgcagcgtttcatggctatgtctgatgtaccttctctttcggtgggcaaggaagtccaa
tgggagaaactgattgcaaaagcagcatcaatcagagatatatgtaagcagaggccatat
caacatggtgcagatatgttggcagctatttctcaggtgttgaatgaatgcaccaagcct
gatcaagctactccagcagccttggtattacaaggtcttcatgcactctgtcaagctgag
gttgtttgcattcgctctacttggaatgctctctctccaaagctgagttgtgacacaaga
cctctcattctgaagacactgagtgaactattttctctggttccttccttaacagtcaat
acaactgaatatgagaattttaaagttcaagtcctcagcttcctctggactcatactcaa
aacaaggacccaattgtagcaaatgctgcatatagatccctgtccaactttagtgcagca
gaacacaccattcttcatctgcctgaaaagataagaccagaaattcccattcctgaagag
ttggatgacgatgaagatgatgaggatgtggatctttcagttcctggctcttgctatctc
aaactgttgtcactcactccccctttggttttaccagctttggaggaattctttacatca
cttgtgaagcaagaaatggtgaatatgccccgtgggatataccactctgcattaaaagga
ggtgcccgctcagaccaaggaaagactgtagcaggaatccccaattttatattgaaaatg
tatgaaacaaacaagcaaccaggattgaaacctggccttgcaggtggtatgttattttgc
tacgatgtttccatgtatcagagtaaagatggaaaaccattgaatagactgatggccagt
agagggcgaagtttcaagcagacttcacttgctcttgtacatgaggttcatatccagctt
tcagagtggcaccgtgcgattttccttccacaggcctggcttgcatacatgagtcgagct
tatcatgccattttacagggaagactaggagagctggagttgcagttaaaacatggaaaa
gaagaacctgaggaggtgcagtacaaaaagagcacagcctggctctgggttagagacatg
ctgactgatgagatcaccaaggcagctgcaaaggagagtccggtagtgaaaggcaatgcg
ctgttagctttaagcagccttgctgtcgtcgtgtctagacatgaaaccagcctctcctca
gactctgacgggctcctggaggttcaacctaatttcctttcaatgaaagagtggatttcc
atggtacttgatacactcttggtcattgtggatagccattaccaacccagagggcagctt
ctctcctggttttattataagtcctattctggtgaaaacacagctagtgccattgcccgt
tctgctgccgccacggctttgtctctccttgtgccagttttcattatctcttgcaaagag
aaggttgaggaaatcctgaacatgctgactgccaggttacctgggaaaccaagtgctgat
gagtctcaagccgttcaaatccacatgggccttgctttagggatgtttctctctcgcttg
tgtgaagagaaactcagtgatatatctggccaagagatgaaccttcttctgatgaagtct
ttggatgccctggaaaattgctgctttgacactagtcttgaatacaacacgggctgtata
ttgggagttggacttgttctgtccctcatgagccacagcagccaaatgcagtcccgcgtt
cacgtggcagcatcgcttcggaagctgtctgcgtacctagatgacagtgggagccagagc
agaacatttcaggaggtccttgcctacacacttagctgtgtatgtacgtcagcgttcagt
actggaattattgaggctgcagaggctgaggatgttatgaacaagcttcgactgttagtg
gagaatagccagcagacttcaggttttgccctggctttaggaaacatagttcatggattg
tctgtgtgtggacatggaaaagctgaagacttgggcagcaaactacttcctgcctggatc
agaattgttcttacagagggcactcccacaatgctttgtctggcagctcttcacggcatg
gtggccttggtaggctctgaaggggatgtaatgcagctgaaatcagaagccatccagacc
tctcattttcaaggcagacttaatgaagtcattagaaccttaactcaggtcattagtgtc
tctggggtgattggtctccagtcaaatgcaatctggcttcttggacatcttcatctatct
actctatcctcaagtcaaagtagagcctctgttcctactgactatagctatttgcctgaa
agcagttttattggagcagccattggcttcttcattacaggaggaaaaaaaggtcctgaa
tctgttcctccttcccttcttaaattagtgatgaaacccatagcaactgttggagaaagc
taccaatatcctcctgtgaactgggctgcacttctctctccacttatgaggctaaatttt
ggtgaagagattcagcaactgtgccttgaaattatggtgacccaggcacagtcatcccag
aatgcagctgcactattgggcttgtgggtgacgccaccactgatccacagtctgagtctg
aataccaaaagatatctcctgatatctgcacctctgtggataaaacacatctctgatgaa
cagatcctgggttttgttgaaaatttaatggtggcagtttttaaagtaggttccccactt
ggaaatcctgagctatgcccaagcgccttacagggtctgagccaggccatgaaactgccc
agccctgcccaccacctctggagtctgctctctgaagctactgggaaaatttttgacctc
ctgccaaataagattcggagaaaggatctagagctgtatatcagcatagcaaaatgcctc
ttagaaatgacagatgatgatgccaatcggatcgcccaggttactaagagcaacatagaa
aaggctgcctttgtcaaactgtacttagtctctcaaggacgattccccctgatggacctg
actgatatgctgagtgttgctgtgcagcaccgtgagaaagaggtgctggcctggatgatt
ctgcacagcttataccaggcacggattgtgagccatgccaacacgggcgttttgaagaga
atggagtggctcttggaactgatgggttatattagaaatgttgcttaccagtcaacatcc
tttcagaatatggctcttgacgaggctttggacttcttcttgctgatatttgcaaccaca
gtggttgcatgggccgaccacgctgcccctctcctcctcggtctcagtgccagttggttg
ccatggcatcaggagaatggcccggctgggccagtaccaagcttccttggcaggagtcca
atgcacagggtcactctgcaggaagttctcactctgcttcccaatagcatggctctgctg
ctgcagaaagagccatggaaggaacagacccagaagttcattgactggctattcagcatc
atggaaagccctaaagaagccctctcagcaaagtccagggatcttttgaaagccaccctg
ctgtccttgagagttctcccagagtttaagaagaaagctgtatggaccagagcatatggt
tggtga
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