Piliocolobus tephrosceles (Ugandan red Colobus): 111526264
Help
Entry
111526264 CDS
T07491
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03008
Ribosome biogenesis in eukaryotes
pteh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111526264 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
111526264 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pteh03021
]
111526264 (XRN2)
03019 Messenger RNA biogenesis [BR:
pteh03019
]
111526264 (XRN2)
03009 Ribosome biogenesis [BR:
pteh03009
]
111526264 (XRN2)
03016 Transfer RNA biogenesis [BR:
pteh03016
]
111526264 (XRN2)
Transcription machinery [BR:
pteh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111526264 (XRN2)
Messenger RNA biogenesis [BR:
pteh03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
111526264 (XRN2)
Ribosome biogenesis [BR:
pteh03009
]
Eukaryotic type
Pre-60S particles
RNases
111526264 (XRN2)
Transfer RNA biogenesis [BR:
pteh03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
111526264 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
111526264
NCBI-ProteinID:
XP_023047649
Ensembl:
ENSPTEG00000004160
UniProt:
A0A8C9GGE0
LinkDB
All DBs
Position
20:complement(40735659..40824671)
Genome browser
AA seq
1051 aa
AA seq
DB search
MSPRDSDALGFALRGWDHRGRAAAFATQSAAGPRLRQGARPAPFPPLPRPAEPPSHGGGA
VTSPPVSGAHVGGSAGALSRRSRLFGYALQPAGRRLQPCAAMGVPAFFRWLSRKYPSIIV
NCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMV
AIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI
LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS
APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNK
PKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTM
ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYLT
ESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPSGILT
PHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAEDS
DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCAS
WKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMS
DPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSL
GGDVLFVGKHHPLHDFILELYQTGSTEPVDVPPELCHGIQGKFSLDEEAILPDQIVCSPV
PMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKPSDWEKSSNGRQWKPQL
GFNRDRRPVHLDQAAFRTLGHVMPRGSGTGIYSNAAPPPATYQGNLYRPLLRGQAQIPKL
MSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQTQNAAFQPNQYQMLAGPGGYP
PRRDDHGGRQGYPREGRKYPLPPPSGRYNWN
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccgcgactcagacgcgctcggcttcgcgctccgtggctgggaccaccgaggg
cgagctgcagccttcgccactcagtccgctgccggaccccgcctccgacaaggagcccgg
ccagccccttttccgccgctccctcgcccagccgagcctccttcccacggcggcggcgcc
gtgacgtcacctccggtctcaggggcgcacgtgggaggaagtgctggtgccctcagccgc
cgctcccgtctctttggttacgctcttcagcccgccggccgccgcctccagccgtgtgca
gctatgggagtcccggcgttcttccgctggctcagccgcaagtacccgtccatcatagtc
aactgcgtggaagagaagccaaaagaatgcaatggtgtaaagattccagttgatgccagt
aaacctaatccaaatgatgtggagtttgataatctgtatttggatatgaatggaatcatc
catccctgtactcatcctgaagacaaaccagcaccaaaaaatgaagatgaaatgatggtt
gcaatttttgagtacattgacagacttttcagtattgtaagaccaagacgacttctctac
atggcaatagatggagtggcaccacgtgccaaaatgaaccagcagcgttcaaggaggttc
agagcatcaaaagaaggaatggaagcagcagtcgagaagcagcgagtcagggaagaaata
ttggcaaaaggtggctttcttcctccagaagaaataaaagaaagattcgacagcaactgt
attacaccaggaactgaattcatggacaatcttgctaaatgccttcgctattacatagct
gatcgtttaaataatgaccctgggtggaaaaatttgacagttattttatctgatgctagt
gctcctggtgaaggagaacataaaatcatggattacattagaaggcaaagagcccagcct
aaccatgacccaaatactcatcattgtttatgtggagcagatgctgatctcattatgctt
ggccttgccacacatgaacccaactttaccattattagagaagaattcaaaccaaacaag
cccaaaccatgtggtctttgtaatcagtttggacatgaggtcaaagattgtgaaggtttg
ccaagagaaaagaagggaaagcatgatgaacttgccgatagtcttccttgtgcagaagga
gagtttatcttccttcggcttaatgttcttcgtgagtatttggaaagagaactcaccatg
gccagcctaccattcacatttgatgttgagaggagcattgatgactgggttttcatgtgc
ttctttgtgggaaatgacttcctccctcatttgccgtcgttagagattagggaaaatgca
attgaccgtttggttaacatatacaaaaatgtggtacacaaaactgggggttaccttaca
gaaagtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagtt
gaggatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaa
gaaaaaagaaagagaatgaagagagatcagccagctttcactcctagtggaatattaact
cctcatgccttgggttcaagaaattcaccaggttctcaagtagccagtaatccgagacaa
gcagcctatgaaatgaggatgcagaataactctagtccttcaatatctcctaatacgagt
ttcacatctgatggctccccgtctccaataggaggaattaagcgaaaagcagaagacagt
gacagtgaacctgagccagaggataatgtcaggttatgggaagctggctggaagcagcgg
tactacaagaacaaatttgatgtggatgcagctgatgagaaattccgtcggaaagttgtg
cagtcgtacgttgaaggactttgctgggttcttagatattattaccagggctgtgcttcc
tggaagtggtattatccatttcattatgcaccatttgcttcagactttgaaggcattgca
gacatgccatctgattttgagaagggtacaaaaccgtttaaaccactggaacaacttatg
ggagtttttccagctgcaagtggtaattttctacctccatcatggcggaagctcatgagt
gatcctgattctagtataattgacttctatcctgaagattttgctattgatttgaatggg
aagaaatatgcatggcaaggtgttgccctcttgccattcgtggatgagcgaaggctacga
gctgccctagaagaggtatacccagacctcactccagaagagaccagaagaaacagcctt
ggaggtgatgtcttatttgtggggaaacatcacccactccatgacttcattttagagctg
taccagacaggttccacagagccagtggatgtaccccctgaactatgtcatgggattcaa
ggaaagttttctttggatgaagaagccattcttccagatcaaatagtatgttctcctgtt
cctatgttaagggatctgacacagaacactgtagtcagtattaattttaaagacccacag
tttgctgaagattacatttttaaagctgtaatgcttccaggagcaagaaaaccagcagca
gtactgaaacctagtgactgggaaaaatccagcaatggacggcagtggaagcctcagctt
ggctttaaccgtgaccggaggcctgtgcacctggatcaggcagccttcaggactttgggc
catgttatgccaagaggctcaggaactggcatttacagcaatgctgcaccaccacctgcg
acttaccagggaaacttatacaggccgcttttgagaggacaagcccagattccaaaactt
atgtcaaatatgaggccccaggattcctggcgaggtcctcctccccttttccagcagcaa
aggtttgacagaggcgttggggctgaacccctgctcccatggaaccggatgctgcaaacc
cagaatgcagccttccagccaaaccagtaccagatgctagctgggcctggtgggtatcca
cccagacgagatgatcatggagggagacagggatatcccagagaaggaaggaaataccct
ttgccaccaccctcaggaagatacaattggaattaa
DBGET
integrated database retrieval system
