Piliocolobus tephrosceles (Ugandan red Colobus): 111527529
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Entry
111527529 CDS
T07491
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh04151
PI3K-Akt signaling pathway
pteh04382
Cornified envelope formation
pteh04510
Focal adhesion
pteh04512
ECM-receptor interaction
pteh04820
Cytoskeleton in muscle cells
pteh04926
Relaxin signaling pathway
pteh04933
AGE-RAGE signaling pathway in diabetic complications
pteh04974
Protein digestion and absorption
pteh05146
Amoebiasis
pteh05165
Human papillomavirus infection
pteh05200
Pathways in cancer
pteh05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
111527529 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111527529 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111527529 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111527529 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
111527529 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
111527529 (COL4A3)
09158 Development and regeneration
04382 Cornified envelope formation
111527529 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
111527529 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
111527529 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
111527529 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
111527529 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
111527529 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pteh04147
]
111527529 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
pteh00536
]
111527529 (COL4A3)
Exosome [BR:
pteh04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111527529 (COL4A3)
Glycosaminoglycan binding proteins [BR:
pteh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111527529 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111527529
NCBI-ProteinID:
XP_023049646
Ensembl:
ENSPTEG00000039705
UniProt:
A0A8C9M1S3
LinkDB
All DBs
Position
11:113633345..113782645
Genome browser
AA seq
1670 aa
AA seq
DB search
MSPRTAPRSQVLLLQLLLVLLAAAPTASKGCVCKDKGQCFCDGVKGEKGERGFPGPPGSP
GQKGFTGPEGLLGPQGPKGSPGLPGLTGPKGVRGVTGLPGFSGSPGLPGTPGNTGPYGLV
GVPGCNGSKGEQGFPGLPGTLGYRGIPGAPGLKGQKGAPAKGEDIELDAKGDPGLPGAPG
PQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGQKGERGVKGLTGPPGP
PGTVIVTLTGPDNRTDLKGEKGDKGAIGEPGPPGPSGLPGESYGSEKGAPGDPGPQGKPG
KDGVPGFPGSEGVKGNRGFPGLAGEDGIKGQKGDTGPPGFRGPTEYYDTYQEKGDEGIPG
PPGPKGVRGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGIPGSP
GCPGSPGPPGSPGPPGSPGDIIFRKGPPGDRGLPGYLGSSGIPGVDGPKGEPGLLCTQCP
YIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGIPGFPGAKGDRGLKGEK
GETLQPEGQVGAPGDPGVRGQPGRKGFDGNPGTPGVKGLPGPKGELALSGEKGDQGPPGD
PGSPGSPGPAGPAGPPGYGPQGEPGPQGMQGVPGAPGPPGEAGPRGEVSVSTPVPGPPGP
PGPPGHPGPQGPPGMPGSTGKCGDPGLPGPDGEPGIPGIGFPGRPGPKGDQGFPGTKGSL
GCPGKIGEPGLPGKPGVPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPG
TPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKMGPKGD
PGIPGLDRSGFPGETGSPGMSGHQGEMGPPGQKGYPGNPGILGPPGEDGVVGMMGFPGAT
GPPGPPGNPGMPGQRGSLGIPGEKGQRGTPGAKGEQGDKGNPGPSQISHVIGDKGEPGLK
GFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSIGNPGEPGLCGIPGSMGNM
GMPGSKGKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGEMG
KKGEMGQPGPPGHSGPAGPEGAHGSPGSPGLPGRPGPHGDLGFKGIKGFPGPPGIKGPPG
LPGFPGSPGPMGVRGDQGRDGIPGPAGEKGETGLLGAPPGPRGNPGAQGAKGDRGSPGFP
GLPGRKGAMGDAGPRGPTGIEGFPGPPGLPGAIIPGQKGNHGPPGLRGSPGEPGPPGPPG
SHVIGIKGDKGSMGHPGPKGPPGTVGDMGPPGHLGAPGTPGLPGLRGDPGFQGFPGVKGE
KGNPGFLGSIGPPGPIGPIGPPGIRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGP
PGNLGPCGPRGKPGKDGKPGTPGPAGEKGNKGSKGEPGPPGSDGLPGLKGKRGDSGSPAT
WTTRGFVFTRHSQTTAIPSCPEGTAPLYSGFSFLFVQGNERAHGQDLGTLGSCLQRFTTM
PFLFCNVNDVCNFASRNDYSYWLSTPALMPMNMAPITGRALEPYISRCTVCEGPAIAIAV
HSQTTDIPPCPRGWVSLWKGFSFIMFTSAGSEGTGQALASPGSCLEEFRASPFLECHGRG
TCNYYSNSYSFWLASLNPERMFRKPIPSTVKAGDLEKIISRCQVCMKKGH
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccggacggcgcccagatcgcaggtgctcctgctgcagctcctgctggtgctc
ctggccgcggcgcccacggccagcaagggctgtgtctgtaaagacaaaggccagtgcttc
tgtgacggggtcaaaggggagaagggggagagaggctttcctggaccccctggttctcct
ggccagaaaggattcacaggtcctgaaggcttgcttggaccacagggacccaagggctct
ccaggacttccaggactcacgggtcccaaaggtgtaaggggagtaactggattgccagga
ttttctggttctcctggacttccaggcaccccaggcaatactgggccttatggacttgtt
ggtgtaccaggatgcaatggttctaagggtgagcaggggtttccaggactcccagggaca
ctgggctaccgagggatcccgggtgctcctggtttgaaaggacaaaagggtgctcctgct
aaaggagaagatatagaacttgatgcaaaaggtgaccccgggttgccaggggctccagga
ccccagggtttgccaggccctccaggttttcctgggcctgttggcccacctggtcctccg
ggattctttggctttccaggagccatgggacctagaggacctaagggtcacatgggtgaa
agagtgataggacaaaaaggagagcggggtgtgaaagggttaacaggacccccgggacca
ccaggaacagttattgtgaccctaactggcccagataacagaacggacctcaagggggaa
aagggagacaagggagccatcggcgagcctggacctcctggaccctcaggactgcctgga
gaatcatatggatctgaaaagggtgctcctggagaccccggcccgcagggaaaacccggt
aaagacggcgttcctggcttccctggaagtgagggagtcaagggcaacaggggtttccct
gggttagcaggtgaagatggcattaagggacagaaaggggacactggccctccaggattt
cgtggtccaacagaatattatgacacataccaggaaaagggagatgaaggcattccaggc
ccaccagggcccaaaggagttcgtggcccacaaggtcccagtggtccccccggagttcct
ggaagtcctggatcatcaaggcctggcctcagaggagcccctggatggccaggcttgaaa
ggaagtaaaggggaacgaggccgcccaggaaaggatgccatggggattcctgggtcccca
ggttgtcctggttcaccaggccctccaggatcgccgggacctccaggatcaccaggtgac
atcatttttcgcaagggtccacctggagatcgcggactgccaggctatctagggtcttca
ggaatcccaggcgttgatgggcccaaaggagaaccaggcctgctgtgtacacagtgccct
tatatcccagggccccctggtctcccaggattgccagggttacatggtgtaaaaggaatc
ccaggaagacaaggtgcagctggcttgaaaggaagcccagggtccccaggaaatacaggt
cttccaggaattccaggtttcccaggtgccaagggtgaccgaggacttaaaggagaaaaa
ggtgaaacacttcagcctgaggggcaagtgggtgccccaggggacccgggagtcagaggt
caacctgggagaaagggcttcgatggaaatcctggaactccgggagtgaaaggattacca
ggacctaaaggcgaactggctctgagtggtgagaagggggaccaaggtcctccaggggat
cctggctcccctgggtccccaggacctgcaggaccagctggaccacctggctacggaccc
caaggagaacctggtccccagggcatgcaaggagttcctggagcccctggaccacccgga
gaagctggtcctaggggagaagtcagtgtttcaacaccagttccaggcccaccaggacct
ccagggccccctggccatcctggcccccaaggtccacctggtatgcctggatctacgggg
aaatgtggagatcctggtcttccaggacctgatggtgaaccaggaattccgggaattgga
tttcctgggcgtcctggacctaagggagaccaaggttttccaggtacaaaaggatcactg
ggttgtcctggaaaaataggagagcctgggttacctggaaagccaggcgtcccaggagcc
aagggagaaccagcagtagccatgcctggaggaccaggaacaccaggttttccaggagaa
agaggcaattctggggaacatggagaaattggactccctggacttccgggtctccctgga
actccaggaaatgaagggcttgatggaccacgaggagatccagggcagcctggaccacct
ggagaacaaggacccccaggaaggtgcatagagggtcctaggggagcccaaggacttcca
ggcttaaatggattgaaagggcaacaaggcagaagaggtaaaatggggccaaagggagac
ccaggaattccaggcttggatagatcaggatttcctggagaaactggatcaccaggaatg
tcaggtcatcaaggcgagatgggaccaccaggtcaaaaaggatatccaggaaatccagga
attttagggccaccaggtgaagatggagtggttgggatgatgggctttcctggagccact
ggccctccggggccccctgggaacccaggcatgccagggcagagggggagccttggaatt
ccaggagaaaagggccagagaggaaccccaggagccaagggggaacaaggagataaagga
aaccccgggccttctcagatatcccacgtaataggggacaaaggagaaccaggtctcaaa
ggattcgcaggaaatccaggtgagaaaggaaacagaggcgttccagggatgccaggttta
aaaggcctcaaaggactacctggaccagcaggaccaccaggccccagaggagatttgggc
agcattgggaatcccggagaaccaggactatgtggtataccaggaagcatggggaacatg
ggcatgccaggttctaaaggaaaaaggggaactttgggattcccaggtcgagcaggaaga
ccaggcctcccaggtattcacggtctccagggagataagggagagccaggttattcagaa
ggtacaaggccaggaccaccgggaccaacgggggatccaggactgccgggtgaaatggga
aagaaaggagaaatggggcaacctggcccacctggacattcggggcctgctggacctgag
ggagcccatggaagtcctggaagtcctggcctcccaggaaggccaggtcctcatggcgat
ttgggttttaaaggaatcaaaggcttcccgggccctccaggaatcaaaggccctccaggt
cttccaggattcccagggtctcctggaccaatgggtgtaagaggtgaccaaggacgtgat
ggaattcctggtccagccggagaaaagggagaaacgggtttattgggggcccctccaggc
ccaagagggaacccgggtgctcaaggagctaaaggagacaggggatccccaggttttcct
ggcctccctggcagaaaaggggccatgggagatgctgggcctcgagggcccacaggcata
gaaggattcccagggccaccaggtctgcccggtgcaattatccctggccagaaaggaaat
catggtccaccaggcttaagaggaagcccaggtgagcctggtccccctggacctccaggg
agtcacgtaataggcataaaaggagacaaagggtctatgggccaccctggcccaaaaggt
ccacctggaactgtaggagacatgggaccaccaggtcatctgggagcaccaggtactcca
ggtcttccaggactcagaggtgatcctggattccaggggtttccgggcgtgaaaggagaa
aagggtaatcctggatttctaggatccattggacctccaggaccaattgggccaatagga
ccacctggtatacgtggagaccctggcacactgaagattatctcccttccaggaagccca
gggccacctggcacgcctggagaaccagggatgcagggagaacctgggccaccagggcca
cctggaaacctaggaccctgtgggccaagaggtaagccaggcaaggatggaaaaccagga
actcctggaccagctggagaaaaaggcaacaaaggttctaaaggagagccaggaccacct
ggatcagatggattgccaggtttgaaaggaaaacgtggagacagtggatcacctgcaacc
tggacaacgagaggctttgtcttcacccgacacagtcaaaccacagcaatcccttcgtgt
ccagaggggacagcgccactctacagtgggttttcttttctttttgtacaagggaatgaa
cgagcccacggacaagacctcggaactttgggcagctgcctgcagcgatttaccacaatg
ccattcctcttctgcaatgtcaatgatgtatgtaatttcgcatctcgaaatgattattca
tactggctgtcaacaccagctctgatgccaatgaacatggctcccattactggcagggcc
cttgagccttatataagcagatgcactgtttgtgaaggtcctgcgatcgccatagccgtt
cacagccaaaccactgacattcctccatgtcctcgtggctgggtttctctctggaaagga
ttttcattcatcatgttcacaagtgcaggttctgagggcaccgggcaagcactggcctcc
cctggctcctgcctggaagaattccgagccagcccatttctagaatgtcatggaagagga
acgtgcaactactattcaaattcctacagtttctggctggcttcattaaacccagaaaga
atgttcagaaagcctattccatcaactgtgaaagctggagacttagaaaaaataataagt
cgctgtcaggtgtgcatgaagaaaggacactaa
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integrated database retrieval system
