Piliocolobus tephrosceles (Ugandan red Colobus): 111527727
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Entry
111527727 CDS
T07491
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03082
ATP-dependent chromatin remodeling
pteh04714
Thermogenesis
pteh05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111527727 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
111527727 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
111527727 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pteh03021
]
111527727 (SMARCA4)
03036 Chromosome and associated proteins [BR:
pteh03036
]
111527727 (SMARCA4)
Transcription machinery [BR:
pteh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111527727 (SMARCA4)
Chromosome and associated proteins [BR:
pteh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
111527727 (SMARCA4)
Chromatin remodeling factors
BAF complex
111527727 (SMARCA4)
PBAF complex
111527727 (SMARCA4)
GBAF(ncBAF) complex
111527727 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
111527727
NCBI-ProteinID:
XP_023049937
Ensembl:
ENSPTEG00000035611
UniProt:
A0A8C9IKZ1
LinkDB
All DBs
Position
21:complement(41838030..41940009)
Genome browser
AA seq
1679 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHTGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSAAGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKK
SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA
VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD
VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES
ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggcggaactcctcggccgggtccttccccgggccct
ggcccttcccctggagccatgctgggccctagcccgggtccctcgccgggctccgcccac
agcatgatggggcccagcccagggccgccctcagcaggacaccccatccccacccaggga
cctggagggtaccctcaggacaacatgcaccagatgcacaagcccatggagtccatgcac
gagaagggcatgtcggatgacccgcgctacaaccagatgaaaggaatggggatgcggtca
gggggccacactgggatggggcccccgcccagccccatggaccagcactcccaaggttac
ccctcgcccctgggtggctctgagcatgcctctagtccagttccagccagtggcccatct
tcaggcccccagatgtcttccggaccaggaggggcaccactggatggtgctgacccccag
gccttggggcagcagaaccggggcccaaccccatttaaccagaaccagctgcatcagctc
agagctcagatcatggcctacaagatgctggccagggggcagcccctccccgatcacctg
cagatggcggtgcagggcaagcggccaatgcctgggatgcagcagcagatgccaacgcta
cctccaccctcagtgtctgcagcaggacccggccctggccctggccctggccctggcccc
ggtcccggcccggcacctccaaattatagcaggcctcatggtatgggagggcccaacatg
ccccccccaggaccctcaggcgtgccccctgggatgccgggccagcctcctggagggcct
cccaagccctggcctgaaggacccatggcgaatgctgctgcccccacgagcacccctcag
aaactgatccccccgcagccaacgggtcgcccttcccctgcaccccctgccgtcccaccc
gccgcctcgcctgtgatgccaccccagacccagtcccccgggcagccggcccagcccgcg
cccatggtgccgctgcaccagaagcagagccgcatcacccccatccagaagccacggggc
ctcgaccctgtggagatcctgcaggagcgcgagtacaggctgcaggctcgcattgcacac
cgaattcaggaacttgaaaaccttcccgggtccctggccggggatttgcgaaccaaagcg
accattgagctcaaggccctcaggctgctgaactttcagaggcagctgcgccaggaggtg
gtggtgtgcatgcggagggacacagcgctggagacggccctcaatgctaaggcctacaag
cgcagcaagcgccagtccctgcgcgaggcccgcatcaccgagaagctagaaaagcagcag
aagatcgagcaggagcgcaagcgccggcagaagcaccaggaatacctcaatagcattctc
cagcatgccaaggatttcaaggaatatcacagatcagtcacaggcaaaatccagaagcta
accaaggcagtggccacgtaccatgccaacacggagcgggagcagaagaaagagaacgag
cggatcgagaaggagcgcatgcggaggctcatggctgaagatgaggaggggtaccgcaag
ctcatcgaccagaagaaggacaagcgcctggcctacctcttgcaacagacagatgagtac
gtggctaacctcacagagctggtgcggcagcacaaggctgcccaggtcgccaaggagaaa
aagaagaaaaagaaaaagaagaaggcagaaaatgcagaaggacagacgcctgccatcggg
ccggacggtgagcctctggacgagaccagccagatgagcgacctcccagtgaaggtaatc
catgtggagagcgggaagatcctcacgggcacagatgcccccaaagccggacagctggag
gcctggctcgagatgaacccggggtatgaagtagctccgaggtctgatagtgaagaaagt
ggctcagaagaagaggaagaggaggaggaggaagagcagccgcaggcagcgcagcctccc
accctgcccgtggaggagaaaaagaagattccagatccagacagcgacgacgtctctgag
gtggacgcacggcacatcattgagaacgccaagcaagatgtcgatgatgagtatggtgtg
tcccaggcccttgcacgtggcctgcagtcctactatgccgtggcccacgctgtcaccgag
agagtggacaagcagtcagcgcttatggtcaatggtgtcctcaaacagtaccagatcaaa
ggcttggagtggctggtgtccctgtacaacaacaacctgaatggcatcctggctgacgag
atgggcctggggaagaccatccagaccatcgcgctcatcacgtacctcatggagcacaaa
cgcatcaacgggcccttcctcatcattgtgcctctctcaacgctgtccaactgggcgtac
gagtttgacaagtgggccccctccgtggtgaaggtgtcctacaagggatccccagcagca
agacgggcctttgtcccccagctccggagtgggaagttcaacgtcttgctgacgacatac
gagtacatcatcaaagacaagcacatcctcgccaagatccgttggaagtacatgattgtg
gacgaaggtcaccgcatgaagaaccaccactgcaagctgacgcaggtgctcaacacgcac
tacgtggcgccccgccgcctgctgctgacaggcacaccactgcagaacaagcttcccgag
ctctgggcgctgctcaacttcctgctgcccaccatcttcaagagctgcagcacctttgag
cagtggttcaacgcacccttcgccatgactggggaaaaggtggacctgaatgaggaggaa
accattctcatcatccggcgtctccacaaagtgctgcggcccttcttgctccgacgactc
aagaaggaagtcgaggcccagttacctgaaaaggtggagtatgtcatcaagtgcgacatg
tctgcgctgcagcgagtgctctaccgccacatgcaggccaagggcgtgctgctgactgac
ggctccgagaaggacaagaagggcaaaggcggcaccaagaccctgatgaacaccatcatg
cagctgcggaagatctgcaaccacccctacatgttccagcacatcgaggagtccttttcc
gagcatttggggttcaccggcggcattgtccaagggctggacctgtaccgagcctcgggt
aaattcgagcttcttgatagaattcttcccaaactccgagcaaccaaccacaaagtgctg
ctgttctgccaaatgacctccctcatgaccatcatggaagattactttgcatatcgtggc
tttaaatacctcaggcttgatggaaccacgaaggcagaggaccggggtatgctgctgaaa
actttcaacgagcccggctccgagtacttcatcttcctgcttagcacccgggccggggga
ctcggcctgaacctccagtcggcagacactgtgatcattttcgacagcgactggaatcct
caccaggacctgcaagcgcaggaccgagcccaccgcattgggcagcagaacgaggtgcgc
gtgctccgcctctgcacagtcaacagcgtggaggagaagatcctagccgcggccaagtac
aagctcaatgtggaccagaaggtgatccaggccggcatgttcgaccagaagtcctccagc
cacgagcggcgtgccttcttgcaggccatcctggagcatgaggagcaggatgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacttggaggagccacctctaaaggaggaagacgaggtgcctgacgacgag
accgtcaaccagatgatcgcccggcacgaggaggagttcgatctgtttatgcgcatggac
ctggaccgcaggcgcgaggaggcccgcaaccccaagcggaagccgcgcctcatggaggag
gacgagctcccttcgtggatcatcaaggatgatgcggaggtggagcgcctgacctgtgag
gaggaggaggagaagatgtttggccgcggctcccgccaccgcaaggaggtggactacagc
gactcactgacggagaagcagtggctcaagaaaattacaggaaaagatatccatgacaca
gccagcagtgtggcacgtgggctacaattccagcgtggccttcagttctgcacacgtgcg
tcaaaggccatcgaggagggtacgctggaggagatcgaagaggaggtccggcagaagaaa
tcgtcacggaagcgcaagcgagacagcgatgccggctcctccaccccgaccaccagcacc
cgcagccgcgacaaggacgatgagagcaagaagcagaagaagcgtgggcggccgcctgcc
gagaagctctccccgaacccacccaacctcaccaagaagatgaagaagattgtggacgcc
gtgatcaagtacaaggacagcagcagtggacgtcagctcagcgaggtcttcatccagctg
ccctcgagaaaggagctgccggagtactacgagctcatccgcaagcccgtggacttcaag
aagataaaggagcgcatccgcaaccacaagtaccgcagcctcaacgacctagagaaggac
gtcatgctgctgtgccagaatgctcagaccttcaacctggagggctccctgatctatgaa
gactccatcgtcttgcagtcggtcttcaccagcgtgcggcagaaaatcgagaaggaggat
gacagtgaaggcgaggagagtgaggaggaggaagagggcgaggaggaaggctctgaatct
gaatctcggtctgtcaaagtgaagatcaagcttggccggaaggagaaagcacaggaccgg
ctgaagggcggccggcggcgaccgagccgagggtcccgagccaaaccggtcgtgagtgac
gacgacagtgaggaggaacaagaggaggaccgctcaggaagtggcagcgaagaagactga
DBGET
integrated database retrieval system
