Piliocolobus tephrosceles (Ugandan red Colobus): 111527937
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Entry
111527937 CDS
T07491
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
111527937 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pteh04147
]
111527937 (COL18A1)
00535 Proteoglycans [BR:
pteh00535
]
111527937 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
pteh00536
]
111527937 (COL18A1)
Exosome [BR:
pteh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111527937 (COL18A1)
Proteoglycans [BR:
pteh00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
111527937 (COL18A1)
Glycosaminoglycan binding proteins [BR:
pteh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111527937 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Fz
Laminin_G_3
DUF1970
Motif
Other DBs
NCBI-GeneID:
111527937
NCBI-ProteinID:
XP_026303214
Ensembl:
ENSPTEG00000009182
UniProt:
A0A8C9GT32
LinkDB
All DBs
Position
19:complement(33883679..33938243)
Genome browser
AA seq
1754 aa
AA seq
DB search
MAPDPSGCRVLLLLFCCLAAAQADLLNLNWLWFNNKDTSQAAATIPEPQGLLPVQPTADT
TTHVVPQDGSTEPATAPGSPEPPSELLEDSQGTPTSAESPDTPEENIAGVGAKILNVAQG
IRSFVQLWNGTVPTESLARAETLVVEAPVGPLALPGPSSTPRENGTTLWPSHGTPSSPGT
HKTEAGTLPAPTPSPPSLGRPWAPLTGPSVPPPSSGRASLSSSLGGAPAWGSLQDLDSQG
LSPTAAAPSQQLQRPDVRLRTPLLHPLVTGSLGVHAAPSAFSSGLPGALSQVAVTTLIGD
SGAWVSHAANSAGLGLANNSALLGADPEAPAGRCLPLPPSLPVCGRLGISRSWLPNHLHH
ESGEQVQAAARVWEGLLRTHCHPFLSWFFCLLLAPPCGRVPLPAPPPCRQFCEVLQDTCW
SHLSGGRLPVACASLPTQEDGYCVFIGPAAESVGEEVGLLQLLGDPPPQQITQTDDPDVG
LAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIQPATEGPGVLFAITDAAQAVVSLGVKL
SGVRDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVEGGYVALYVDCEEFQR
MPLARSSRGLELEPGAGLFVAQAGGADPDKFQGMIAELKVRKDPQVGPMHCLDEEGDDSD
GASGDFGSGLGDTRELLREETGTALKPRLPTPPPVTAPPLARGSSTEDSRSEEIEEQTTV
TSLGAQTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGEPGIPGPPGRPGPPGSPCLPGP
PGLPCPVSPLGPVGPALQPVPGPQGPPGLPGRDGNPGRDGEPGDPGEDGKPGDTGPQGFP
GTPGDVGPKGDKGDPGVGARGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRG
PRGFPGPPGPPGVPGLPGEPGRFGVNGSDVPGPAGLPGVPGREGPPGFPGLPGPPGPPGK
EGPPGRTGQKGSLGEAGAPGHKGSKGDPGPAGARGESGLAGAPGPAGPPGPPGPPGPPGP
GLPAGFDDMEGSGGPFWATARGADGLQGPPGLPGLKGDPGVPGLRGAKGEVGANGAPGFP
GLPGREGTAGPQGPKGDRGSQGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDGAVLSV
PGPEGRPGFAGFPGPAGPKGDLGSKGERGSPGPKGEKGEPGSVFSPDGSTLGSAQKGAKG
EPGFRGPPGPYGRPGHKGDIGFPGRPGRPGMNGLKGEKGEPGDAHVGFGMRGMPGPPGPP
GPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPAGPKGAKGEVGPPGPPGQFPFDFLQLE
AEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPPGYPGIPGPKGESIRGQPG
PPGPQGPPGIGYEGRQGPPGPPGPPGPPGPPSFPGPHRQTVSVPGPPGPPGPPGPPGTMG
TSSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVRNGFRKVQLEPRTPLPRGTDN
EVAALQPPVVQLHDSNPYPRREYAHPTARPWRADDILASPPRLPEPRPYPGAPHHSSYVH
LRPALPTSPPAHTHRDFQPVLHLVALNIPLPGSMRGIRGADFQCFQQARAVGLAGTFRAF
LSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFAGSEGPLKPGARIFSFDGKDVL
RHPTWPQKSVWHGSDPSGRRLTESYCETWRTESPSVTGQASSLLGGRLLGQNAASCHHAY
IVLCIENSFMTASK
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgaccccagcggctgccgcgtcctgctgctgctcttctgctgcctggcagct
gctcaggctgacttgctgaacctgaactggctttggttcaataataaggacaccagccaa
gcagctgccacgatccctgagccccaggggctcctgcctgtgcagcccacagcagacacc
accacgcacgtggtcccccaggatggttccacggagccagcgacagcccctggcagccct
gagccgccttcagagctgctggaggacagccagggcacccccacttctgccgagagcccg
gacacgccagaggagaatattgccggtgtgggagccaagatcctgaacgtggcccagggc
atccggagctttgtccagctgtggaatggcactgtgcccactgagagcttggcccgggcg
gaaacgctggttgtcgaggctcctgtgggccccctcgccctccctgggccttccagcacc
ccccgggagaatgggaccactctgtggcccagccatggcactcccagctctccgggcacc
cacaagaccgaggccggcaccctgcctgcacccaccccatcgcctccctccctgggcagg
ccctgggcgccactcacggggccctcagtgccaccaccgtcctcaggtagagcttctctc
tcctcctcgctgggcggggcccctgcctggggaagcctgcaggacctggacagccaagga
ctctcgcccaccgcagccgctcccagccagcagctccaacgccctgacgtccgcctgcgc
acaccacttctgcaccccctggtgacgggctccctgggcgtgcacgcggccccctctgcc
ttctcctcggggctcccgggcgcactgtctcaggtcgcagttaccactttaatcggggac
agcggtgcttgggtctcccatgcggctaactctgcggggctgggtcttgctaataactct
gccctgctcggggctgaccctgaggcccccgccggtcgctgcctacccctgccgccctcc
ctgccggtctgtggccgcctgggcatctcgcgctcctggctgcccaaccacctccaccac
gagagcggcgagcaggtgcaggccgcagcgcgggtgtgggagggcctgctgcggacgcac
tgccaccccttcctctcctggttcttctgcctgctcctggccccaccgtgcggcagggtc
ccgctgcccgccccgccaccctgccgccagttctgcgaggtcctgcaggacacgtgctgg
agccacctgagtgggggccggctgcctgtcgcctgtgcctcgctcccaacccaggaggac
gggtactgtgtgttcattgggccggctgcagagagcgtcggtgaggaggtggggctgctg
cagctccttggggaccctccgccccagcaaatcacccagacggatgaccccgacgtcggg
ctggcctacgtctttgggccagatgccaacagtggccaagtggcccggtaccacttcccc
agcctcttcttccgtgacttctcgctgctgttccacatccagccggccacggagggccca
ggggtgctgtttgccatcacggacgcggcacaggcagtggtctcactgggcgtgaagctc
tctggggtgcgggatgggcaccaggacatctccctgctctacacagagccaggcgcaggc
cagacccacacagctgccagcttccggctccctgccttcgtcggccagtggacacactta
gcactcagtgtggagggtggctacgtggccctctacgtggactgtgaggagttccagaga
atgccgcttgctcggtcctcacggggtctggagctggagcctggcgccgggctcttcgtg
gctcaggcaggaggagcggaccctgacaagttccaggggatgatcgctgagctgaaggtg
cgcaaggacccccaggtgggccccatgcactgcctggacgaggaaggcgatgactcagat
ggggcatccggagactttggcagcgggctcggggacacccgggagcttctcagggaggag
acgggcacggccctaaaacccaggctccccacgccacccccagtcactgctccacccttg
gctagaggcagcagcacggaagattccagaagtgaagaaatcgaggagcagaccacggtg
acttcattaggagctcagacacttcctggctcagattctgtctccacgtgggacgggagt
gtccggacccctgggggccgcgtgaaagagggcggcctgaaggggcagaaaggggagcca
ggtattccaggcccgcctggccggccaggccccccagggtccccctgcctgcctggtccc
ccgggtctcccgtgcccggtcagtcccctgggtcctgtaggtccagcgttgcaacctgtc
cccggaccacaaggacctccagggctgccagggagggatggcaaccctggaagggacggt
gagccgggtgaccctggtgaagacggaaagccgggcgacaccgggccacagggcttcccc
gggactccaggggacgtgggccccaagggtgacaagggagaccccggggttggagcgaga
gggcccccaggaccccaggggcctccggggcccccaggaccctccttcagacatgacaaa
ctgaccttcattgacatggagggatctggctttggtggcgatctggaggccctgcggggt
cctcgaggcttccctggaccccccggaccccccggtgtcccaggcctgcccggtgagccg
ggccgctttggggtgaacggttctgacgtcccaggacccgccggccttcctggtgtgcct
gggcgcgagggtccccctgggtttcccggcctcccgggacccccaggccctccaggaaaa
gaggggcccccaggaaggacggggcagaaaggcagcctgggtgaagcaggcgccccggga
cataaggggagcaagggagaccctggtcctgctggcgctcgcggggagagcggcctggca
ggagcccctggacccgctggaccaccaggcccccctgggccccctgggccaccaggacca
ggactccccgctggatttgatgacatggaaggctccggggggcccttctgggcaacagcc
cgaggcgctgacgggctgcagggaccccccggcctgccaggactgaagggggatcctggt
gtgcctgggctgcggggggccaagggagaagttggagcaaacggagcccccgggttcccc
ggcctgcctggcagagagggcactgctgggccccaggggccaaagggagacagaggcagc
cagggagaaaagggagatccagggaaggacggagtcgggcagccgggcctccccggaccc
cccggacccccggggcctgtggtctacgtgtcggagcaggatggtgccgtcctgagcgtg
ccgggacctgagggccggccgggtttcgcaggctttcccggacctgcaggacccaagggc
gacctgggctctaagggtgaacgaggctccccaggacccaagggtgagaagggtgaaccg
ggcagcgtcttcagccccgatggcagtaccctgggctctgcccagaaaggagccaaggga
gagccgggcttccgaggacccccgggtccgtacggacggccgggacacaagggagacatc
ggcttccccggacggccgggtcgccccgggatgaacggattgaaaggagagaaaggggag
ccgggagatgcccacgttggatttggcatgaggggaatgcccggccccccagggcctcca
gggcccccaggccctccagggactcctgtttatgacagcaatgtgtttgctgagtccagc
cgccccgggcctccaggattgccagggaatcagggccctgcaggacccaagggcgccaaa
ggagaagtgggcccccccggaccaccagggcagtttccattcgacttccttcagttggag
gctgaaatgaagggggagaagggagaccgaggtgatgcaggacagaaaggcgaaaggggt
gagcccggaggtggcggcttttttggctccagcctgccaggcccccccggccccccaggc
ccacctggctaccctgggattccaggtcccaagggagagagcatccggggccagcctggc
ccacctggacctcagggaccccccggcatcggctacgaggggcgccagggccctcccggc
cccccaggcccccctggccccccagggcccccttcatttcccggccctcacaggcagact
gtcagcgttcccggccctccgggcccccctgggccccctgggccacctggaaccatgggc
acctcctcaggggtgaggctctgggccacgcgccaggccatgttgggccaggtgcacgag
gttcccgagggttggctcatcttcgtggccgagcaggaggagctctacgtgcgcgtgcgg
aatgggttccggaaggtccagctggagccccggacgccacttccacgagggacggacaac
gaagtggctgccttgcagccccccgtggtgcagctgcacgacagcaacccctacccccgg
cgggagtatgcccaccccaccgcaaggccctggcgggcagacgacatcctggccagcccc
cctcgcctgcccgagccccggccctaccctggagccccgcaccacagctcctacgtgcac
ctgcggccggcgctccccacgagcccacccgcccacacccaccgcgacttccagcccgtg
ctccacctggttgcactcaacatccccctgccgggcagcatgcggggcatccggggggcc
gacttccagtgcttccagcaggcgcgggctgtggggctggcgggcaccttccgtgccttc
ctgtcctcgcggctgcaggacctgtacagcatcgtgcgccgtgccgaccgcgcagccgtg
cccatcgtcaacctcaaggatgagctgctgtttcccagctgggaggctttgttcgcgggc
tctgagggtccgctgaagcctggggcacgcatcttctcctttgacggcaaggacgtcctg
aggcaccccacctggccgcagaagagcgtgtggcatggctcggaccccagcgggcgcagg
ctgactgagagctactgcgagacgtggcggacagagtctccctcggtcacaggtcaggcc
tcctccctgctggggggccggctcctagggcagaatgccgcaagctgccaccacgcctat
atcgtcctctgcattgagaacagcttcatgactgcctccaagtag
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