Piliocolobus tephrosceles (Ugandan red Colobus): 111532136
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Entry
111532136 CDS
T07491
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pteh03041
]
111532136 (DDX1)
03016 Transfer RNA biogenesis [BR:
pteh03016
]
111532136 (DDX1)
Enzymes [BR:
pteh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111532136 (DDX1)
Spliceosome [BR:
pteh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111532136 (DDX1)
Transfer RNA biogenesis [BR:
pteh03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
111532136 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
111532136
NCBI-ProteinID:
XP_023055146
Ensembl:
ENSPTEG00000022562
UniProt:
A0A8C9HHP8
LinkDB
All DBs
Position
15:15292373..15327732
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE
QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLTQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggtgttatgcctgagattgcacaagctgtggaagagatg
gattggctcctcccaactgatatccaggctgaatctatcccactgatactgggaggaggt
gatgtacttatggctgcagaaacaggaagtggcaaaactggtgcttttagtattccagtt
atccagatagtttatgaaactctgaaagaccaacaggaagggaaaaaaggaaaaacaaca
attaaaactggtgcttcagtgctcaacaaatggcagatgaacccatatgacagaggatct
gctttcgcaattgggtcagatggtctttgttgtcaaagcagagaagtaaaggaatggcat
gggtgtagagctactaaaggattaatgaaagggaaacactactatgaagtatcctgtcat
gaccaagggttatgcagggtcggatggtctaccatgcaggcctctttggacctaggtact
gacaagtttggatttggctttggtggaacgggaaagaaatcccataataaacagtttgat
aattatggagaggaattcactatgcatgataccattggatgttacctagatatagataaa
ggacatgtcaagttctccaaaaatggaaaagatcttggtctggcatttgaaataccacca
catatgaaaaaccaagccctctttcctgcctgtgttttgaagaatgctgaattgaaattt
aacttcggtgaagaggaatttaagtttccaccaaaagatggctttgttgctctttccaag
gcaccggatggttacattgtcaaatcgcagcactcaggtaatgcacaggtgacacaaaca
aagtttctccccaatgctccgaaagcgctcattgttgaaccttcccgggagttagctgaa
caaactttgaataacatcaagcagtttaagaaatatattgacaatcctaaattaagggag
cttctgataattggaggtgttgcggcgcgggatcagctctctgttttggaaaatggagta
gatatagttgtaggtactccgggaagactagatgacttggtgtcaactggaaagctgaac
ttatctcaagttagattcctggtcctggatgaagctgatgggcttcttactcaaggttat
tctgattttataaataggatgcacaatcagattcctcaggttacctctgatggaaaaaga
cttcaggtgattgtttgctctgccactttgcattctttcgatgtaaagaaactttcagag
aagataatgcattttcctacctgggttgacttaaaaggagaagactctgttccagatact
gtacaccatgttgttgtcccagtaaatcccaaaactgacagactctgggaaaggcttgga
aagaaccacattagaactgacgatgtacatgcaaaagataacacaagacctggtgctaat
agtccagagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgggca
atcaaggaacataagatggatcaagcaattatcttctgtagaaccaaaattgactgtgat
aacttggagcagtactttatgcaacaaggaggaggacctgataaaaaaggacaccagttc
tcatgtgtttgtcttcatggtgacagaaaacctcatgagagaaagcaaaacttggaaaga
tttaagaaaggagatgtaagattcttgatttgcacagatgtagctgctagaggaattgat
atccatggtgttccttatgttataaatgtcactctgcccgatgaaaagcaaaactacgta
catcgaattggcagagtaggaagagctgaaaggatgggtctggcaatttccctggtggca
acagaaaaagaaaaggtttggtaccacgtatgtagcagccgtggaaaagggtgttataac
acaagactcaaggaagatggaggctgtaccatatggtacaatgagatgcaattactgtct
gagatagaagaacacctgaactgtaccatttctcaggttgagccggatataaaggtacca
gtggatgaatttgatgggaaagttacctacggtcaaaaaagggctgctggtggtggaagc
tataaaggccatgtggatattttggcacctaccgttcaagagttggctgcccttgaaaag
gaggcgcagacatctttcctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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