Piliocolobus tephrosceles (Ugandan red Colobus): 111535056
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Entry
111535056 CDS
T07491
Symbol
SETX
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
111535056 (SETX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pteh03021
]
111535056 (SETX)
Enzymes [BR:
pteh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
111535056 (SETX)
5.6.2.5 RNA 5'-3' helicase
111535056 (SETX)
Transcription machinery [BR:
pteh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111535056 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
AAA_30
UvrD-helicase
AAA_22
ResIII
NAT10_TcmA_helicase
nSTAND3
SLFN-g3_helicase
UvrD_C_2
AAA_16
Motif
Other DBs
NCBI-GeneID:
111535056
NCBI-ProteinID:
XP_026312909
Ensembl:
ENSPTEG00000038984
LinkDB
All DBs
Position
14:5920516..6019853
Genome browser
AA seq
2708 aa
AA seq
DB search
MNTCYWCTPRGGSTVDFLKRYASNTPSSEFQTANEDLCYCLYCVVEYHKARDELPFLHEV
LWELETLRLIKHFEKFMKAEIGDDDDLYIVDSNGEMLVLDITGRDFEYKLRVPLLEILKY
PYLLVHERVNELCVEALCRMEQANCSFQVVEKHPGIYLFLVHPNDMVRRWAILTARNLGK
VDRDDYYDLEEVLICLFKVIKLGLLENPDIYTSSVLEKGKLILLPSHMYDTTNYKSYWLG
ICMLLTILEEQAMDSLLLGSDKQTDFMQSILRTMERQSHDDSVDPFWPALHCFMVILDRL
GSKVWGQLIDPIEAFQAIINNASYNREIEHIRNSSVRIKSEPESYLDDMVTCSQIVYNYN
PEKTKKDSGWRTAICPDYCPNIYEEMETLASVLQSDIGQDIRVHNSTFLWFIPFVHSLID
LKDLGVAYIVEVVYHLYTEVRGVLNQTDAMCDKVTEFFLLILVSVIELHRNKKCLHLLWV
SSQQWIEAVVKCAKLPNTAFTRSSEKSSGNCSRRTAVIPSLSMHSMPCNSVQLACVRLIR
SLLKEGCQLGLRSLCMRFWDKVNLILRQNLSLGWQLTSQETHELQTCLKQIIRNMKFKAP
PCNTFADLTSTCKTSPAPYNREESEQIGKKSRNDRHYLEASSPTFSKEPMKAQDSVLIKA
DNTIEGDNDEQHYIKDVKLEDQLSAGSCFKQSSENMFTERAEDEVKISTRKQKSVKGNSS
YTPEVCTSRNGPERGCDREIIVSTRLLTDFSTDALEKASTSNEDFSLKDDVLAKTSKQKT
KVQKDEICAKLSHEIKKQHRKSTLVNNTINLDENLTVSNIESFYSRKDVGVQKGDGFIHN
LSLDPSGVLDDNKNGEQKSQNNLLPEDKQLKNEELGIFYSHENNCEIQEFHGDDKDSIPF
TKMANTSEKKSSCFKDLLTVPESRDEAMSNSTNVIYSNLTREQAPGISPKSDTLTDSQID
RDLHKLSLLAQASVTTFPSDSPQNSSQLQRKGKEDKRCFTANQNNVGDASLGEVIIISDS
DDDDDERILSLEKLTKQDKRRLEKERPEQHISTVKEEKNPVNEEKTKSLFQFEESDSQCF
EFESASEVFSVWQDHLDNNNSVQDGEKKCLTPIANTTNGQDCTDYVSEVVKKGAGGIEEH
TRPQSSSISVEEFCEIEVKKPKRKRSEKPVPEDPVSPSSSVRNEGQSDTNKRELVGNDFK
SIDRRTRTPNSRIQRATTVSQKKSSKLCTYTEPVRKVPVSKTPKKTHSDAKKGQNRSSNY
LSCRTTPAIVPPKKFRQCPEPTSTVEKLGLKKGPRKAFELSQRSLDYVAQLRDHGKTVGV
VDTRKKTKLISPQNLSVRNNKKLLTSQELQMQRQIRPKSQKNRQRLSGCESTDATRAGPH
TAQNSDTFVPESDRSDYDCTGGTEVLANSNGKQLIKRMPSEPETIKAKHGSPATDGACPL
NQCDSIVLNGTIPTSEVIVSISEDPLGGGDPTAHHTEMATLNEGEPDSSSDTEEDNLFLT
QNDPEDMDLCSQMENDNYKFIELIHGKDTVQVEEDSVSQPQLESLSGTKCKYKDCLETTK
NQGEYCPQHSEVKAADEDVFRKPGLPPSASKPLRPTTAKIFSSKSTSRIAGLSKSLETSS
ALSPSLKNKSKGIQSILKVPQPAPLVAQKPVGEMKNSSNVFHPQAPNNSNRQGCEVPFGE
SKYFPSSSPVNILLSSQSVSDTFVKEVLKWKYEMFLNFDQCGPPASLCQPISRPVPIRFH
NYGDYFNVFFPLVVMNTFETMAQEWLNSPNRENFYQLQVRKFPSDHLSYWEFTVYLEECE
LAKQLYPKENDLVFLVPERINEEKKDAERNDIQDLHKYHSGYVQKFRRTLFRPNGKAECY
LSIQTQENFRANINQLVNCIVISSLVTTQRKLKAMSLLGSQNQLARAVLNPNPMDFCTKD
LLTTTSERIIAYLRDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLY
CLLTENQRKGHSDENSSAKVKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNC
GDINLLRLGPGKSINNEVLKFSLDSQVNHRMKKDLPSHVQAMHRRKEFLDNQLDELSRQR
ALCRGGREIQRQELDENISKLSKERQELASKIKEVQGRPQKTQSTIILESHIICCTLSTS
GGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLNPLIHRCNKLILVGDPKQLPPTVISM
KAQDYGYDQSMMARFFRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYIYNRILK
TNRQTETIRCSSDWPFQPYLVFDVEDGSERRDNDSYVNVQEIKLVMEIIKLIKDKRKDVS
FRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRANSGQGS
IGFLASLQRLNVTITRAKYSLFILGHLRTLMQLLPRSFCVHVNHSPFFSPEPKYLHWALK
ENQHWDQLIQDAQKRGAIIKTCDKNYRHDAMKILKLKPVLQRILTYPLTIAPEVSRPQGD
LPSSKLDSGFAETSFAASLYHTPSDSKETTLTVTSKDPERSPVYDQLRDPRLLKRMGIEV
KGGIFLWDPQPFSPQHPGATPSAGEPSFPVVHQDLGHVQQPAAVVATLSSPKPPVQGEPP
AASPEASTCQSKCDDPEEELCHRREARAFSEGEQEKCGSETPHTRRNSMWDKRRLEQEDS
SSKKRKLL
NT seq
8127 nt
NT seq
+upstream
nt +downstream
nt
atgaacacatgttattggtgtactccacgtggtggttccaccgttgacttcctaaagcgc
tatgcttccaacactccatccagtgaatttcaaacagccaacgaagacctctgctactgc
ttatattgtgtggtggaataccacaaagcaagagatgaattgccattcttgcatgaggtt
ttatgggaattggaaaccttacgtctgataaagcactttgaaaaattcatgaaggcagaa
attggagatgatgacgacttatatatagtagacagcaatggagagatgctagtgttggac
atcactggacgagactttgaatataagcttcgagttcctcttcttgaaatactgaaatat
ccttatttgcttgtacatgaacgtgttaacgagttatgtgttgaagcactttgtcggatg
gaacaagccaattgctcctttcaggtggtggaaaaacatccagggatctatttgtttttg
gtccatcccaatgatatggtccggcgttgggctatcttgactgcaagaaacttggggaaa
gtggacagagacgattattatgacttagaagaagttttaatttgcctttttaaagtcatt
aagttgggacttctagagaatccagacatttatacttcttctgtcctagagaagggtaaa
ctaattcttctgccctcacacatgtatgatactaccaactacaaaagctattggttaggt
atttgcatgttgctgaccattcttgaggaacaagccatggattccctattgttgggctca
gacaaacaaactgattttatgcagtcgatacttcgcactatggagaggcaatcacacgat
gatagtgtggatcctttctggccagcattacactgttttatggtgattctggaccgcctt
ggatctaaggtctggggtcagcttattgatcctattgaggcatttcaagccattatcaac
aatgcaagctacaatagagagattgagcatatacggaacagctctgtaaggatcaagtca
gaaccggagtcgtatttggatgatatggtgacttgcagccagatcgtatacaattataat
cctgaaaagaccaaaaaggattctggatggagaacagccatttgcccagattattgtcct
aacatatatgaagaaatggaaacattagccagtgtgcttcagtcagatattggtcaagac
atacgtgttcataacagcacatttctgtggttcatcccttttgtccattccctcatcgat
cttaaggatttgggtgtggcttacatagtagaggttgtttatcatctgtacactgaagtc
agaggtgtcctcaaccaaacagatgccatgtgtgacaaagtcactgaattttttcttcta
attttggtatcagtgattgaactgcatagaaataaaaaatgtttgcatttgctgtgggta
agttcccagcaatggatagaagctgtcgtcaaatgtgccaagcttcctaatactgcattt
acacggagttctgagaaatcatctggaaattgctccagaagaacagcagtgataccatca
ttgtcgatgcattccatgccatgtaactctgtacaacttgcttgtgtgcggctgattaga
agtctccttaaagaaggttgtcagcttgggctgcgatctctttgcatgcgattctgggat
aaggtcaacttaatccttagacaaaatttatctctaggttggcagttgactagtcaggaa
acccacgagctacaaacttgtttaaagcaaattattagaaacatgaaattcaaagcacct
ccatgtaacacttttgcggatctgacttctacatgtaaaacctctccggcaccttataat
agagaagaaagtgaacaaatagggaagaagtctagaaacgataggcattatttggaagct
tccagcccaacattttctaaagaaccaatgaaagcgcaagacagtgtattgattaaagca
gataacactatagaaggtgacaatgatgagcaacattatataaaggatgtgaaactagaa
gaccagctctcagctgggtcatgcttcaagcagagtagtgaaaacatgtttactgaaaga
gctgaagatgaagttaaaataagtacaaggaagcagaagtctgtaaaagggaactcctca
tatacaccagaggtttgtacttcaagaaatggtccagaaaggggatgtgacagagaaata
atagtatcaacacgtttgttgactgattttagcactgatgctttggaaaaagcgtccaca
tcaaatgaagatttctctttaaaggatgatgttcttgctaaaacctcaaaacaaaaaact
aaggtacagaaagatgaaatctgtgcaaagttatcacatgaaataaagaaacaacacagg
aagagtactttggtcaataatactatcaatttagacgaaaatttgactgtatctaacatt
gagagtttctattcaaggaaagatgtaggagttcagaaaggagatggtttcatacacaat
ctttctttagaccctagtggtgttctggatgataataagaatggagaacaaaaatctcaa
aacaatttattgccagaagacaagcaattaaagaatgaagagttaggtattttctattcc
catgaaaacaattgtgaaatacaggaatttcatggtgatgataaagattcgatccccttt
acaaaaatggccaatacttcagagaagaaatcatcttgctttaaagatcttttgactgta
cctgaatcaagagatgaggcgatgagtaatagtaccaatgtgatttattcgaacttgaca
agagaacaggcccctggcatcagtcctaaatctgacaccttaacggattctcagatagac
agagaccttcacaaattatctttactagctcaagccagtgttactacatttccatctgat
tcccctcagaactcatcccagctacaaaggaaaggaaaagaagataaaagatgtttcaca
gctaaccaaaataatgttggagatgcctcccttggagaggtgattattatttcagattct
gacgatgatgatgatgaaagaatcctgagtcttgagaaactcactaaacaggacaaaaga
cgccttgagaaggaacgtccagagcagcacatttcaacagttaaggaggaaaagaatcca
gtaaacgaagaaaagacgaagtctctttttcagtttgaggaatctgattctcagtgtttt
gagtttgaaagtgcatctgaagtgttttccgtttggcaagatcatctagacaataataat
tcagttcaagatggtgagaaaaaatgtttgactcctatagccaataccacaaatggtcag
gattgtacagattatgtatctgaagttgttaaaaaaggggcagggggcattgaagaacac
acaagaccacagagcagtagtatttctgttgaggagttttgtgaaattgaagtaaaaaag
cctaagagaaaacgatctgaaaaaccagttcctgaagatcctgtgagtccttcatcttct
gtcagaaatgagggccagtctgatactaataagagagagcttgttggaaatgattttaaa
agtatagatagaaggactagaactcccaattcaagaattcagagagccactacggtttca
caaaagaaatcttcaaagctttgtacttacacagaacccgtcaggaaagttccagtttct
aagacccctaagaaaactcattcggatgccaaaaaaggacagaatagaagttcaaattac
ctcagttgtaggacaactcctgctatagtgccaccaaagaaatttcgtcagtgtcctgaa
ccaacttcaacagttgagaaacttggcctgaaaaagggtcctcgtaaggcatttgagttg
tcccagcgatctttggattatgtagctcagttacgtgatcatggcaaaactgttggagta
gttgatactcgaaaaaagactaaattaatttctcctcagaacctgtctgtcagaaataat
aagaaactgctgactagtcaagaacttcagatgcaaaggcagatcagacccaaatcacaa
aaaaatagacaaagactttctggttgtgaaagtacagatgctacaagagcagggcctcat
acagcacagaattctgacacatttgtaccagaatctgataggtcagattatgattgtaca
ggaggaactgaggtacttgccaacagtaacggaaaacagttaataaaacgcatgccttct
gaaccagaaaccataaaagcaaaacatgggtctccagcgactgatggtgcttgccctttg
aaccagtgtgattctatagtgttaaatggaacaataccaacaagtgaagtaattgtctct
atttcagaggaccctctggggggaggtgatccgacagcacatcatacagagatggcaact
ttgaacgagggagagcctgactctagcagtgatacagaggaagataacttatttttaaca
caaaatgatcctgaagatatggatttatgttcacaaatggagaatgacaattataaattc
attgaactaattcatggaaaagatacagttcaggttgaagaagattctgtaagtcagcct
cagttggaatctttgagtggcacaaagtgtaaatacaaagattgtcttgaaaccacaaaa
aaccagggtgaatactgcccacaacactctgaagtgaaagcagcagatgaagatgtattt
cgtaaacctggtttgccgccttctgcatctaaacctttgagacctaccactgctaagatt
tttagctcaaagagtacttcacgaattgctggtctttctaaatctttggaaacttcttca
gcactttcaccatctctaaaaaataagtcaaaggggatacagtcgattttgaaagtacca
cagccagctcccctcgtagctcagaagccagtgggtgaaatgaaaaattcgagcaatgtt
tttcatcctcaggctccaaataattccaacaggcaaggttgcgaagttccatttggtgaa
agcaaatattttccatcttcctctccagtaaacattctcttgtcatcacagtctgtctct
gacaccttcgttaaagaggtcttaaaatggaaatatgaaatgtttttgaactttgatcag
tgtgggccccctgcaagtctttgtcagcccatctcaagacctgtgcctatcagatttcac
aattatggagattattttaatgtttttttccctttggtggtaatgaatacttttgaaaca
atggcacaggaatggctcaactctccaaatagagagaatttctatcagttgcaagtacgg
aaatttccttctgatcatttatcatactgggagtttacggtttatctggaagaatgtgaa
ttggctaaacagctttatccaaaggaaaatgatttggtgtttttagttcctgagagaata
aatgaagagaagaaagatgcagagagaaatgacatacaagatctccacaaatatcattct
ggttatgttcagaaatttcgccgcactttattcaggcctaatgggaaagctgagtgttac
ctttccatccagactcaagagaattttcgggccaatataaaccaacttgtgaattgtatt
gtaatcagttctctggtaacaacacaaaggaagttgaaagccatgtctctgttgggtagt
cagaaccaactggctagagctgttctgaatccaaaccctatggacttctgtacaaaagat
ttactaactacaacatctgagagaattattgcttacttaagagatttcaatgaagaccaa
aagaaagcaatagaaactgcatatgctatggtgaaacactcaccatcagttgccaaaatc
tgcttgattcatggaccacctggaacaggaaaatcaaaaactattgttggcctcctctat
tgtctactgacagagaaccagaggaaggggcattcagacgaaaactccagtgccaaagtc
aaacaaaaccgtgtcctcgtgtgtgcaccttccaatgcagctgttgatgaacttatgaaa
aaaattatccttgaattcaaagaaaaatgcaaagacaagaagaatcctttaggaaactgt
ggagatataaatttattacgactgggtccaggaaagtctatcaataatgaggttctaaag
ttcagtttggacagccaagtaaaccacagaatgaaaaaagatttaccttctcatgttcag
gcaatgcatagaagaaaggaatttctagataatcagttggatgagctttcccggcagcga
gctctatgccgaggtggacgggaaatacagaggcaagaattagatgaaaacatttccaaa
ctttctaaggaaaggcaggaacttgcttctaaaattaaagaggttcaaggacgcccacag
aaaacacagagtaccatcatcttagagtcccatatcatctgctgcacattgagcacaagt
ggtggcttactacttgaatctgctttccgggggcaagggggtgtccccttcagctgtgtc
attgttgatgaggctggacagtcttgtgaagttgagactcttaacccactcatccatcgt
tgcaataagctcatcctagtaggagatcccaagcagctccctcccacagtcatctctatg
aaagcacaggactatggctacgaccagtcaatgatggctcgcttcttcagactgctggaa
gagaatgtagaacacaacatgatcagcaggctgcctattctgcagctcactgtgcagtac
aggatgcatccagacatatgcctcttcccttctaattatatttacaacagaatcttaaaa
acaaatagacagacagaaaccattcgatgttcatcagactggccatttcaaccatacctt
gtgtttgatgtcgaagatggttcagaaagacgggataatgactcatacgtaaatgttcaa
gaaataaaactggtgatggaaataattaagcttattaaagacaaaagaaaggatgttagt
tttcgaaacattggcataataactcattacaaggcccagaagacgatgattcagaaggat
ttggacaaagagttcgatagaaaaggaccagcagaagtagatactgtggatgcgttccag
ggtcggcagaaggattgtgttattgttacatgtgtcagagcaaatagcgggcaaggttca
attggattcctggcaagtttgcagagattgaatgtcaccatcacacgagccaagtacagc
ctcttcatcctcggacatttgaggaccctgatgcaacttcttcctaggagcttttgtgta
cacgtgaaccattcgccttttttcagcccagaacccaagtatctacactgggctctcaag
gaaaaccagcattgggatcagctgattcaggatgctcagaagcgtggtgccattattaag
acctgtgacaaaaactatagacatgatgcaatgaagattctgaaactcaagcctgtgcta
cagagaattctcacttaccctcttaccatagccccagaggtatccagaccccagggtgac
ttgcccagcagcaagctagacagtggatttgccgagacatcttttgctgcttctctgtac
cacacaccctctgactccaaggaaactactcttactgttacttcaaaggaccctgaaaga
tctcctgtttatgaccaacttcgggacccacgactgctgaagaggatgggcattgaggtc
aaaggaggaatattcctatgggatccacaacccttcagcccccagcatcctggagcaaca
ccttctgcaggagagccgagcttccctgtcgttcaccaggacctgggccatgtacagcag
cctgctgctgtagtggctactctgagcagccccaaacctcccgtgcagggcgaacctcca
gctgccagtcctgaggcttccacgtgtcagagcaaatgtgatgacccagaagaggagctc
tgtcacaggagagaggccagggctttcagtgaaggcgagcaggagaagtgcggttccgag
acccctcacaccaggaggaactctatgtgggacaagaggagactggagcaggaggacagc
agttccaagaaaagaaagcttttatag
DBGET
integrated database retrieval system
