Piliocolobus tephrosceles (Ugandan red Colobus): 111535669
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Entry
111535669 CDS
T07491
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pteh03036
]
111535669 (SHOC1)
Chromosome and associated proteins [BR:
pteh03036
]
Eukaryotic type
Meiosis-specific proteins
Others
111535669 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
111535669
NCBI-ProteinID:
XP_023057654
Ensembl:
ENSPTEG00000031979
UniProt:
A0A8C9IAV1
LinkDB
All DBs
Position
14:27143387..27244505
Genome browser
AA seq
1444 aa
AA seq
DB search
MTDTSVLDQWKASFFVEDFLEKKTITRMVTQINCEFEEVVPSSNPDSQIEVEEVSLYTHM
DYNEVFTPVSCLEKYSALQKQNQDLFIDDKGILFVSNRKHLPTLHTLLSRLKLFLVKDPL
LDFKGQIFTEVNFSRECFSLQENLEAFVKEDFCMDKVNFCQEELEDTIHLNEPSSFLIEY
EFLIPPSLKPEIDIPSLSELKELLNLVPEIINYVDESEKLFERDLTNKHGIEDIGDIKFS
STEILTIQNQSEPEECSKPGELEMPLTPLFLTCQHTSVNSLCTELQTFPLSPVCKINLLT
AEESANKYYMMWQLERCRSPLNTFLLTAPRIQEPHSQYSVADLKKILSVKEESLVINLEK
AEWWKQAGLNLKMMETLEHLNTYLCHNNLSSNDTEIEVFLPTKVLQLESCLEHKSHSSPI
ALIDEKSTNNRLSLPQKSPFLAKEVPDLCFSDEYFSDKRAAKEEKPKNDQEPVNRIIQKK
ENEDHFELDCTGPSIKSSSSSIIKKASFEHGKKQENDLDLLNDFIMLRNKYKTCTSKTEV
TNSDEKHDKEACSLTLQEESPIVHVNKTLEEINQERGTDNVIEIQASDSQCQAFCLLEAA
ASPILKNLVSSCTLPTAKWKFATVIFDQTRFLLKEQEKVVSDAVHQGTIDEREMTFKHAA
LLHLLVTVRDVLLTCSLDTALGYLSKAKDIYNSILGPHLGDIWRQLEIVQFIRGKKPEIN
YKIQELQCQILNWMQSQQQIKVLIIIRMDSDGEKHLLIQILNKIEGLTLTVLHSKERKDF
LESEGVLKGTSSCVVVHNQYIGADFPWSNFTFVVEYNYVEDSCWTKHCKDLNIPYMAFKV
ILPDTVFKRSTLLDRFGGFLLEIQIPYVFFASEGLLNTPDILQLLESNYNISLVERECSE
SLKLFGSSERYVVVTVDEHTAIILQDLEELNCEKASDNIIMRLMALSLQYRYCWIILYTK
ETLNSEYPLTEKTLHHLALIYAALVSFGLNSEELDVKLVIAPGVEATALLIRQIADHNLM
TSKRDPHEWLDKSWLEVSPSEEEMYLLDFPCVNPLVAQLMLNKGPSLHWILLATLCQLQE
LLPEVPEKVLKHFCSITSLFKISSSSVTKSPQISSPQDNRNRISTLSSQSSASDLDSVIQ
EHNEYYQYLGLGETVQEDKTTTLNDNSSIMELKEISDFLPPVTSYNQTSYWKDSSCKPNI
VQNTPFLINIESRRPAYNSFLNHSDSESDVFSLGLTQMNCETIKSPSDAQKRVSVVPRFI
NSQKRRTHEAKGFISKEVSDPIFSLEGSHSPLHWNLKKNIWEQENHPFNLQYGAEQTTCN
KFYSQKGNLFTDQQKCLSDEFEGLTYESSNDETFWRELPSVPSLDLFCASDSNANQKEFN
SLYFYQRAGKSLGQKRHPESSFNSGDKESLTGFMYSQVPQFKKRRLAYEKVPGRVDGQTR
LRFF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgacagatacctcagtcttggaccaatggaaagcaagtttctttgtggaggatttcctt
gagaaaaaaacaattacaagaatggtgacccagattaattgtgaatttgaggaagttgtt
ccaagttcaaatccagactcccaaattgaagtagaggaggtcagtttatacacccacatg
gactacaatgaagtctttacccctgtcagttgtttagaaaaatattcagcacttcaaaaa
cagaaccaagatttatttattgatgataaaggaatactttttgtaagtaatagaaaacac
ctaccaactttgcatactctcttgagtagactaaaactatttttggtaaaggatcctctt
ttagatttcaaaggacagatcttcacagaagttaatttttccagggaatgtttctctctt
caagaaaatttggaagcttttgtgaaagaagatttttgtatggataaagtgaacttttgt
caggaggaactagaagatacaatacatttaaatgagccatcaagttttcttattgagtat
gaattcttaatacctccaagcctcaaaccagaaattgatattccatcactctcagaactg
aaggagttattaaacctagtgcctgaaataataaactatgtagatgaaagtgaaaaactt
ttcgaaagagatcttactaacaagcatggaattgaggatattggggacataaaattcagc
tccacagagattttgaccattcaaaaccagagtgaaccagaagagtgcagtaaaccagga
gagttagaaatgccactaactcctctattcctaacatgccagcatacttcagtgaattca
ttatgcacagaacttcagacatttccattatctccagtttgtaaaattaatttgcttact
gctgaagaatcagctaataaatactacatgatgtggcaattagaaagatgtagaagccct
ttgaacacatttttgcttacagcgccaagaattcaagagccccacagccaatattcagtt
gcagatttgaaaaagatactttcggttaaagaagaaagccttgtgattaatctggaaaag
gcagagtggtggaaacaagcaggactaaatctgaaaatgatggaaacgttggaacatctg
aatacatatttatgtcataataatttgtcttctaatgacactgaaattgaggtatttttg
cctacaaaagtacttcagttagaatcatgtttagaacataaaagtcattcttcacctatt
gcacttattgatgaaaaatctacaaataatcgtttatcacttccacaaaagagtccattt
ctggcaaaagaagtaccagatctatgtttttctgatgaatatttctctgataaaagagca
gcaaaagaagaaaaaccaaagaatgaccaagaaccagtaaatagaataatccaaaagaaa
gaaaatgaagatcactttgaacttgattgcacaggaccatctattaaatcatcttcctct
tcgataattaaaaaagcatcttttgaacatggtaaaaaacaagagaatgatttggacctt
ttgaacgactttattatgctgcgaaataaatataagacttgcacctcaaagactgaagtc
acaaacagtgatgaaaaacatgataaagaagcatgttctttgacacttcaagaagaaagt
cctattgttcatgttaataaaaccctggaggaaataaatcaggaaaggggaacagataat
gtcattgaaattcaagcgtcagatagccagtgccaagcattttgcctcctcgaagcagca
gcttctcctatcttaaaaaatcttgtatcctcctgtactctccctactgctaagtggaaa
tttgccactgttatttttgaccaaacaaggtttctcttaaaggaacaagaaaaagtagta
agtgatgctgttcaccaaggtacaattgatgaaagagaaatgactttcaagcatgccgct
ctcttacatcttctggtaacagttagagatgtccttttaacatgcagcttggacacagca
ttgggatatttgtcaaaagcaaaagatatctacaacagcattttaggcccccatttgggt
gacatttggagacagctggaaattgtacagtttattagggggaaaaagcctgaaatcaac
tacaagatacaagaattgcaatgtcagatactaaattggatgcaaagtcaacagcaaatt
aaggtactgattataataagaatggactcagatggtgaaaaacatttactcattcaaatt
cttaacaaaatagaaggtttaacactgactgtccttcattcaaaagaaagaaaagatttt
ttggaatctgaaggtgttttaaagggtacaagttcctgtgtagttgtacataatcaatat
attggagcagatttcccctggagtaatttcacatttgtagtggaatacaattatgtggaa
gactcttgttggactaaacactgcaaagatttgaatattccttacatggcctttaaagtg
attcttccagacacagtttttaaaagaagcaccttgttggatagatttggaggttttctt
ttggaaattcagattccatatgtgttttttgcatctgaaggacttcttaatactccagac
atacttcagctgctagaatccaactataacatctcactagtagagagagaatgcagtgag
tcattgaaactcttcggaagttcagagcgttatgtagtggtaacagttgatgaacacact
gccataattttgcaggatctagaagaattgaattgtgagaaggcatcagacaatatcatt
atgaggctgatggcattatcattacagtacagatattgttggataattttatataccaaa
gaaacactaaattcagagtatccgcttacagaaaagacacttcatcacctagcactgatt
tatgcagctttggtttcatttgggctaaactctgaagaactggatgtaaagcttgtaatt
gccccaggagtagaagcaactgccttgctaattcgacaaattgctgaccacaatttaatg
acctcaaagagagatcctcatgaatggttggataaatcctggcttgaagtttcaccatct
gaggaagaaatgtacttacttgattttccatgtgttaacccattggtggctcagctcatg
ctaaataaaggaccttcactgcattggatattattagcaactctgtgtcaacttcaggaa
ctcctacctgaagtcccagaaaaagtgttaaagcatttttgtagcatcacttccctattc
aagattagttcttcttctgtaacaaaatcaccgcaaatttcatcacctcaggacaacagg
aatcggattagtaccttgtcttctcagagttcagcttctgatttagactctgtcattcaa
gaacataatgaatattatcagtatttaggattaggagagacagtgcaggaagacaaaacc
accactttgaatgacaactcttccattatggaactaaaagaaatctcagattttttacca
cctgtgacttcgtacaatcagaccagctactggaaagactctagttgtaaacctaatata
gtgcagaatactccttttctaattaatatagaatcaaggagaccagcttataactccttt
ctaaaccacagtgattcagagtcagatgtcttttctttgggtctaacacaaatgaactgt
gaaactataaaatcaccaagtgacgctcagaagagagtgtcagttgtcccccgttttata
aattctcagaaaaggagaacacatgaagcaaaaggtttcataagtaaagaagtatctgac
cctatcttttcactagagggctctcattctcctcttcattggaacttaaagaaaaatata
tgggaacaagagaatcacccgttcaacttacaatatggtgcagagcagactacatgtaac
aaattttactctcagaaaggtaatttattcactgatcagcaaaaatgtctatcagatgag
tttgaaggcctcacatatgaaagttcaaatgatgagactttctggagagaattaccatct
gtccccagtttggatttattttgtgcttctgattctaatgcaaatcaaaaagaattcaac
agcctttatttctaccaaagagctggaaaaagtttaggacagaaaaggcatcctgaatct
tcatttaactcaggagacaaggaatcattaacaggttttatgtactcacaagtaccacaa
ttcaaaaaacgacgtctagcctatgaaaaagtcccgggtagagttgatgggcagactcgg
ctgaggtttttttga
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