Piliocolobus tephrosceles (Ugandan red Colobus): 111536875
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Entry
111536875 CDS
T07491
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin-2
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh05014
Amyotrophic lateral sclerosis
pteh05017
Spinocerebellar ataxia
pteh05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
111536875 (ATXN2)
05017 Spinocerebellar ataxia
111536875 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
111536875 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pteh03019
]
111536875 (ATXN2)
Messenger RNA biogenesis [BR:
pteh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111536875 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
111536875
NCBI-ProteinID:
XP_026312358
Ensembl:
ENSPTEG00000013692
LinkDB
All DBs
Position
10:complement(109026093..109179374)
Genome browser
AA seq
1409 aa
AA seq
DB search
MRSVAEAPRSPAAGTECRPFAAAKWPGWRSLQGPAPRSGRGGGGGAASGQYPSAAPPPPG
PGPPPSRQRSPPSASDCFGCNGNGGGEFRPGSPQLLGLGGPPRPFVVLLLPLGSPSAPPA
APTRASPLSARASPPRSGVSSARPAPGCPRPACEPVYGPLTMSLKPQQQQQQQQPQQPPP
PPPPAAANVRKPGGSGLLASPAAAPSPSSSSVSSSSATTPSSAAAATSGGGRPGLGRGRN
SNKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDA
AHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYAKRDAFTDSAISAKVNGEHK
EKDLEPWDAGELTANEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLE
RDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHSIN
TRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPNSGSDQRVVN
GGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAP
VSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHNPPSEAATPPVARTS
PSGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAGIIPTEAVAMPIPAA
SPTPASPASNRAVTPSSEAKDSRLQDQRQNSPAGNKENIKPNETSPSFSKAENKGISPIV
SEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLNKNREGEKSRDLIKDKIEPSAKDSFTEN
SSSNCTSGSSKPNSPSISPSILSNTEHKRGPEVTSQGVQTSSPACKQEKDDKEEKKDAAE
QVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPN
MMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVKYLELELLRYVPNMPQQRQDQHHQS
AMMHPASAAGPPIAATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNA
RMMAPPTHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYA
HPNATLHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIY
HAGLAPTPPSMTPASNTQSPQNSFPAAQQTVFTIHPSHVQPAYTNPPHMAHVPQCASEAL
ARCGLEMRLSWIYLSEGYLAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPI
PVSTTAHFPYMTHPSGEACVCRGRRGTPKHSARTGGMAGRASASSPHLRTSKTHPGVCTG
GTVTISLASGPEASGSRVCVCSDGIQDLA
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcagtggccgaagctcctcggagtcccgcggcgggcaccgagtgtcgccccttc
gccgcagccaagtggcccgggtggcgctcgctccaggggccggcgccgcggagcgggcgg
ggcggcggcggcggcgcggcctctggacagtatccctccgccgcccctcccccgcccgga
cctggcccccctccctcccggcagcgctcgcctccctccgcctcagactgttttggttgc
aacggcaacggcggcggcgagttccggcccggctccccgcagctcctcggtctcggcggg
cctccccgccccttcgtcgtcctccttctccccctcggcagcccgagtgcccccccggcc
gcgccaacccgcgcctccccgctcagcgcccgcgcgtccccgccgcgctccggcgtctcc
tcggcgcgcccagctcccggctgtccccgcccggcgtgcgagccggtgtatgggcccctc
accatgtcgctgaagccccagcagcagcagcagcagcagcagccgcagcagccgccgccg
ccgccgccgcccgcggctgccaatgtccgcaagcccggcggcagcggccttctagcgtcg
cccgccgccgcgccttcgccgtcgtcgtcttcggtctcctcgtcctcggccacgactcct
tcctcggcggccgctgcgacctccggcggcgggaggcccggcctgggcagaggtcgaaac
agtaacaaaggactgcctcagtctacgatttcttttgacggaatctatgcaaatatgagg
atggttcatatacttacatcagttgttggctccaaatgtgaagtacaagtgaaaaatgga
ggtatatatgaaggagtttttaaaacctacagtccgaagtgtgatttggtacttgatgcc
gcacatgagaaaagtacagaatccagttcggggccaaaacgtgaagaaataatggagagt
attttgttcaaatgttcagactttgttgtggtacagtttaaagatatggactccagttat
gcaaaaagagatgcttttactgactctgctatcagtgctaaagtgaatggcgaacacaaa
gagaaggacctggagccctgggatgcaggtgaactcacagccaatgaggaacttgaggct
ttggaaaatgatgtatctaatggatgggatcccaatgatatgtttcgatataatgaagaa
aattatggtgtagtgtctacgtatgatagcagtttatcttcatatacggtgcccttagaa
agagataactcagaagaatttttaaaacgggaagcaagggcaaaccagttagcagaagaa
attgagtcaagtgcccagtacaaagctcgagtggccctggaaaatgatgataggagtgag
gaagaaaaatacacagcagttcagagaaattccagtgaacgtgaggggcacagcataaac
actagggaaaataaatatattcctcctggacaaagaaatagagaagtcatatcctgggga
agtgggagacagaattcaccgcgtatgggccagcctggatcgggctccatgccatcaaga
tccacttctcacacttcagatttcaacccgaattctggttcagaccaaagagtagttaat
ggaggtgttccctggccatcgccttgcccatctccttcctctcgcccaccttctcgctac
cagtcaggtcccaactctcttccacctcgggcagccacccctacacggccgccctccagg
cccccctcgcggccatccagacccccgtctcacccctctgctcatggttctccagctcct
gtctctactatgcctaaacgcatgtcttcagaagggcctccaaggatgtccccaaaggcc
cagcgacatcctcgaaatcacagagtttctgctgggaggggttccatatccagtggccta
gagtttgtatcccacaacccacccagtgaagcagctactcctccagtagcaaggaccagt
ccctcggggggaacgtggtcatcagtggtcagtggggttccaagattatcccctaaaact
catagacccaggtctcctagacagaacagtattggaaatacccccagtgggccagttctt
gcttctccccaagctggtattattccaactgaagctgttgccatgcctattccagctgca
tctcctacgcctgctagtcctgcatcgaacagagctgttaccccttctagtgaagctaaa
gattccaggcttcaagatcaaaggcagaactctcctgcaggaaataaagaaaatattaag
cccaatgaaacatcacctagcttctcaaaggctgaaaacaaaggtatatcaccaattgtt
tctgaacatagaaaacagattgatgatttaaagaaatttaagaatgattttaggttacag
ccaagttctacttctgaatctatggatcaactactaaacaaaaatagagagggagaaaaa
tcaagagatttgatcaaagacaaaattgaaccaagtgctaaggattctttcactgaaaat
agcagcagcaactgtaccagtggcagcagcaagccgaatagccccagcatttccccttca
atacttagtaacacggagcacaagaggggacctgaggtcacttcccaaggggttcagact
tccagtccagcatgtaaacaagagaaagatgataaggaagagaagaaagacgcagctgag
caagttaggaaatcaacattgaatcctaatgcaaaggagttcaacccacgttccttctct
cagccaaagccttctactaccccaacttcacctcggcctcaagcacaacctagcccatct
atggtgggtcatcaacagccaactccagtttatactcagcctgtttgttttgcaccaaat
atgatgtatccagtcccagtgagcccaggcgtgcaacctttatacccaatacctatgacg
cccatgccagtgaatcaagccaagacctatagagcaggtaaagttaaatacctagaattg
gaattgctgaggtatgtaccaaatatgccccaacagcggcaagaccagcatcatcagagt
gccatgatgcatccagcgtcagcagcgggtccaccaattgcagccaccccaccagcttac
tccacgcaatatgttgcctatagtcctcagcagttcccaaatcagccccttgttcagcat
gtgccacattatcagtctcagcatcctcatgtctatagtcctgtaatacagggtaatgct
agaatgatggcaccaccaacacatgcccagcctggtttagtatcttcttcagcaactcag
tacggggctcatgagcagacgcatgcgatgtatgcatgtcccaaattaccatacaacaag
gagacaagcccttctttctactttgccatttccacgggctcccttgctcagcagtatgcg
caccctaatgctaccctgcacccacatactccacaccctcagccttcagctacccccact
ggacagcagcaaagccaacatggtggaagtcatcctgcacccagccctgttcagcaccat
cagcaccaggccgcccaggctctccatctggccagtccacagcagcagtcagccatttac
cacgcggggcttgcgccaactccaccctccatgacacctgcctccaacacgcagtcgcca
cagaatagtttcccagcagcacaacagaccgtctttacaatccatccttctcacgttcag
ccggcgtataccaacccaccccatatggcccacgtacctcagtgcgccagtgaggctctg
gcaaggtgtgggctagagatgcgactcagttggatctatctctcagaaggctaccttgct
catgtacagtcaggaatggttccttctcatccaactgcccatgcgccaatgatgctaatg
acgacacagccacccggcggtccccaggccgccctcgctcaaagtgcactacagcccatt
ccagtctcgacaactgcgcatttcccctatatgacgcacccttcaggtgaggcgtgtgtg
tgcaggggccgccggggcaccccaaagcattctgctcgcacaggtggaatggcaggcagg
gccagtgcttcaagcccacatttgagaactagcaagacccatccaggagtgtgcacagga
gggactgtgacgatcagtttagcatcagggcctgaggcttccgggagccgagtctgtgtg
tgttctgatggtatacaggatttggcttga
DBGET
integrated database retrieval system
