Piliocolobus tephrosceles (Ugandan red Colobus): 111538262
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Entry
111538262 CDS
T07491
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
111538262 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pteh03036
]
111538262 (DICER1)
Chromosome and associated proteins [BR:
pteh03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111538262 (DICER1)
microRNA pathway
RISC loading complex
111538262 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
DEAD
ResIII
Cas3-like_C_2
DSRM_2
Motif
Other DBs
NCBI-GeneID:
111538262
NCBI-ProteinID:
XP_023061325
Ensembl:
ENSPTEG00000009127
UniProt:
A0A8C9LKG3
LinkDB
All DBs
Position
6:11265748..11338070
Genome browser
AA seq
1920 aa
AA seq
DB search
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETD
IDPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPD
GTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFMLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDI
EKSEARIGIPSTKYTKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGV
GVRSLPADFRYPNLDFGWKKSIDSKSFISISNSSSAENDNYCKHSTIVPENAAHQGANRT
SSLENHDQMSVNCRTLLSESPGKLHVEVSADLTAINGLSYNQNLANGSYDLANRDFCQGN
QLNYYKQEIPMQPTTSYSIQNLYNYENQPSDECTLLSNKYLDGNANKSTSDGSPMMAVMP
GTTDAIQVLKGRMDSEQSPSIGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGDSF
LKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLP
PGYVVNQDKSNTDKWEKDEMTKDCMLANGKLDEDYEEEDEEEESLMWRAPKEEADYEDDF
LEYDQEHIRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMPFSSDFEDFD
YSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIADC
VEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCA
AASVASSRASVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNKAY
LLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNN
TIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDI
EVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEP
ETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPNS
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaacccctcagcatggcaggcctgcagctcatgacccctgct
tcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataac
atttatacgccaagaaaatatcaggttgaactgctcgaagcagctctggatcataatacc
atcgtctgtttaaacactggctcagggaagacatttattgcagtactactcactaaagag
ctgtcctatcagatcaggggagacttcaacagaaatggaaaaaggacggtgttcttggtc
aactctgcaaaccaggttgctcaacaagtgtcagctgtcagaactcattcagatctcaag
gttggggaatactcaaacctagaagtaaatgcatcttggacaaaagagagatggaaccaa
gagtttactaagcaccaggttcttattatgacttgctatgtcgccttgaatgttttgaaa
aatggttacttatcactgtcagacattaaccttttggtgtttgatgagtgtcatcttgca
atcctagaccacccctatcgagaaattatgaagctctgtgaaaattgtccatcatgtcct
cgcattttgggactaactgcttccattttaaatgggaaatgtgatccagaggaattggaa
gaaaagattcagaaactagagaaaattcttaagagtaatgctgaaactgcaacggacctg
gtggtcttagacaggtatacttctcagccatgtgagattgtggtggattgtggaccattt
actgacagaagtgggctttatgaaagactgctgatggaattagaagaagcacttaatttt
atcaatgattgtaatatatctgtacattcaaaagaaagagattctactttaatttcaaaa
cagatactatcagactgtcgtgctgtattggtagttctgggaccctggtgtgcagataaa
gtagctggaatgatggtaagagaactacagaaatacatcaaacatgagcaagaggagctg
cacaggaaatttttattgtttacagacacttttctaaggaaaatacatgcactatgtgaa
gagcacttctcacctgcctcacttgacctgaaatttgtaactcctaaagtaatcaaactg
ctcgaaatcttacgcaaatataaaccatatgagcgacagcagtttgaaagtgttgagtgg
tataataataggaatcaggataattatgtgtcatggagtgattctgaggatgatgatgag
gatgaagaaattgaagaaaaagagaagccagagacaaattttccttctccttttaccaac
attttatgtggaattatttttgtggaaagaagatacacagcagttgtcttaaacagattg
ataaaggaagctggcaaacaagatcctgagctggcttatatcagtagcaattttataact
ggacatggcattgggaagaatcagcctcgcaacaagcagatggaagctgaattcagaaaa
caggaagaggtacttaggaaatttcgagcacatgagaccaacctgcttattgcaacaagt
attgtagaagagggtgttgatataccaaaatgcaacttggtggttcgttttgatttgccc
acagaatatcgatcctatgttcaatctaaaggaagagcaagggcacccatctctaattat
ataatgttagcagatacagacaaaataaaaagttttgaagaagaccttaaaacttacaaa
gctattgaaaagatcttgagaaacaagtgttccaagtcggtcgatactggtgagactgac
atcgatcctgtcgtggatgatgatgacgttttcccaccatatgtgttgaggcctgacgat
ggtggtccacgagtcacaatcaacacggccattggacacatcaatagatactgtgctaga
ttaccaagtgatccgtttactcatctagctcctaaatgcagaacccgagagttgcctgat
ggtacattttattcaactctttacctgccaattaactcacctcttcgagcctccattgtt
ggtccaccaatgagctgtgtacgattggctgaaagagttgtagctctcatttgctgtgag
aaactgcacaaaattggggaactggatgaccatttgatgccagttggaaaagagactgtt
aaatatgaagaagagcttgatttgcatgatgaagaagagaccagtgttccaggaaggcca
ggttccacgaaacgaaggcagtgctacccaaaagcaattccagagtgtttgagggatagt
tatcccaaacctgatcagccctgttacctgtatgtgataggaatggttttaactacacct
ttacctgatgaactcaactttagaaggcggaagctctatcctcctgaagataccacaaga
tgctttggaatactgacagccaaacccatacctcagattccacactttcctgtgtacaca
cgctctggagaggttaccatatccattgagttgaagaagtctggtttcatgttgtctcta
caaatgcttgagttgattacaagacttcaccagtatatattctcacatattcttcggctt
gaaaaacctgcactagaatttaaacctacagatgctgattcagcgtactgtgttctacct
cttaatgttgttaatgactccagcactttggatattgactttaaattcatggaagatatt
gagaagtctgaagctcgcataggcattcccagtacaaaatatacaaaagaaacacccttt
gtttttaaattagaagattaccaagatgcagttatcattccaagatatcgcaattttgat
cagcctcatcgattttatgtagctgatgtgtacactgatcttaccccactcagtaaattt
ccttcccctgagtatgaaacttttgcagaatattataaaacaaagtataaccttgaccta
accaatctcaaccagccactgctggatgtggaccatacatcttcaagacttaatcttttg
acacctcgacatttgaatcagaaagggaaagctcttcctttaagcagtgctgagaagagg
aaagccaaatgggaaagtctgcagaataaacagatactggttccagaactctgtgctata
catccgattccagcatcactgtggagaaaagcagtttgtctccccagcatcctttatcgc
cttcactgccttttgactgcagaggagctgagagcccagactgccagcgatgctggcgtg
ggagtcagatcacttcctgcggattttagataccctaacttagacttcgggtggaaaaaa
tctatcgacagcaaatctttcatctcaatttctaactcctcttcagcggaaaatgataat
tactgtaagcacagcacaattgtccctgaaaatgctgcacatcaaggtgctaatagaacc
tcctctctagaaaatcatgaccaaatgtctgtgaactgcagaacgttgctcagcgagtcc
cctggtaagctccatgttgaagtttcagcagatcttacagcaattaatggtctttcttac
aatcaaaatctcgccaatggcagttatgatttagctaacagagacttttgccaaggaaat
cagctgaattactacaagcaggaaatacccatgcaaccaactacctcatattccattcag
aatttatacaattatgagaaccagcccagcgatgaatgtactctcctgagtaataaatac
cttgatggaaatgctaacaaatctacctcagatggaagtcccatgatggccgtaatgcct
ggtacgacagacgctattcaagtgctcaagggcaggatggattctgagcagagcccttct
attgggtactcctcaaggactcttggccccaatcctggacttattcttcaggctttgact
ctgtcaaacgctagtgatggatttaacctggagcggcttgaaatgcttggcgactccttt
ttaaagcatgccatcaccacgtatctgttttgcacttaccctgatgctcatgagggccgc
ctttcatatatgagaagcaaaaaggtcagcaactgtaatctgtatcgccttggaaaaaag
aagggactgcccagccgcatggtggtgtcaatatttgatccccctgtaaactggcttcct
cctggttatgtagtaaatcaagacaaaagcaacacagataaatgggaaaaagatgaaatg
acaaaagactgcatgctggcgaatggcaaactggatgaggactacgaggaggaggatgag
gaggaagagagcctgatgtggagggctccgaaggaagaggctgactatgaagatgatttc
ctggagtatgatcaggaacatatcagatttatagataatatgttaatggggtcaggagct
tttgtaaagaaaatctctctttctcctttttcaaccactgattctgcatatgaatggaaa
atgcccaaaaaatcctccttaggtagtatgccattttcatcagattttgaggattttgac
tacagctcttgggatgcaatgtgctatctggatcctagcaaagctgttgaagaagatgac
tttgtggtggggttctggaatccatcagaagaaaactgtggtgttgacacgggaaagcaa
tccatttcttacgacttgcacactgagcagtgtattgctgacaaaagcatagcggactgt
gtggaagccctgctgggctgctatttaaccagctgtggggagagggctgctcagcttttc
ctctgttcattggggctgaaggtgctcccggtaattaaaaggactgatcgggaaaaggcc
ctgtgccctactcgggagaatttcaacagccaacaaaagaacctttcagtgagctgtgct
gctgcttctgtggccagttcacgcgcttctgtattgaaagacttggaatatggttgtttg
aagattccaccaagatgtatgtttgatcatccagatgcagataaaacactgaatcacctt
atatcggggtttgaaaattttgaaaagaaaatcaactacagattcaagaataaggcttat
cttctccaggcttttacacatgcctcctaccactacaatactatcactgattgttaccag
cgcttagaattcctaggagatgcgattttggactacctcataaccaagcacctttatgaa
gacccgcggcagcactccccgggggtcctgacggacctgcggtctgccctggtcaacaac
accatctttgcatcgctggctgtaaagtacgactaccacaaatacttcaaagctgtctct
cccgagctcttccacgtcatcgatgactttgtgcagtttcagcttgagaagaatgaaatg
caaggaatggattctgagcttaggagatccgaggaggatgaagagaaagaagaggatatt
gaagttccaaaggccatgggggatatttttgagtcgcttgctggtgccatttacatggat
agtgggatgtcgctggagacggtctggcaggtgtactaccccatgatgcggccactcata
gaaaagttttctgcaaatgtaccccgttcccctgtgcgagaattgcttgaaatggaacca
gaaactgccaaatttagcccggctgagagaacttatgacgggaaggtcagagtcaccgtg
gaagtagtaggaaaggggaaatttaaaggtgttggtcgaagttacaggattgccaaatct
gcagcggcaagaagagccctccgaagcctcaaagctaatcaacctcaggttcccaatagc
tga
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