Piliocolobus tephrosceles (Ugandan red Colobus): 111538868
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Entry
111538868 CDS
T07491
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pteh03009
]
111538868 (PDCD11)
Ribosome biogenesis [BR:
pteh03009
]
Eukaryotic type
90S particles
Other 90S particles
111538868 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
HAT_Syf1_CNRKL1_N
Spt6_S1
HAT_PRP39_N
HAT_PRP39_C
OB_RRP5_4th
HAT_Syf1_CNRKL1_C
Suf
OB_RRP5
TPR_14
TPR_19
ARM_TT21
UTP6_C
TPR_16
DUF2110
DUF7017
ARM_TT21_5th
TPR_2
PPR
Motif
Other DBs
NCBI-GeneID:
111538868
NCBI-ProteinID:
XP_031792029
Ensembl:
ENSPTEG00000005690
LinkDB
All DBs
Position
9:complement(30202031..30253534)
Genome browser
AA seq
1872 aa
AA seq
DB search
MATLEESFPRGGTRKIHKPEKAFQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTKKLKIE
KRESSKSAREKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYT
KKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNRVLS
AEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLPLLKAQEYIRQKNKGAKLKVGQYLN
CIVEKVKGNGEVVSLSVGHSEVSTAIATEEQSWTLNNLLPGLVVKAQVQKVTPFGLTLNF
LTFFTGVVDFMHLDPKNAGTYFSNQAVRACILCVHPRTRVVRLSLRPIFLQPGRPLTRLS
CQNLGAVLDDVPVQGFFKKAGATFRLKDGILAYARLSHLSDSKNVFNPEAFKPGNTHKCR
IIDYSQMDELALLSLRTSIIEAQYLRYHDIEPGAVVKGIVLTIKSYGMLVKVGEQMRGLV
PPMHLADILMKNPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLVESKLPVITCYADAK
PGLQTHGFIIRVKDYGCIVKFYNNVQGLVPKHELSTEYIPDPERVFYIGQVVKVAVLNCE
PSKERMLLSFKLSSDPEPKKEPAGHSQKKGKAINIGQLVDVKVLEKTKDGLEVAVLPHNI
LAFLPTSHLSDHVANGPLLHHWLQAGDILHRVLCLSQSEGHVLLCRKPALVSTVEGGQDP
KNFSEIHPGMLLIGFVKSIKDYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVA
AKVTNVDEEKQRMLLSLRLSDCALGDLATTSLLLLSQCLEELQGVRSLMSNRDSVLIQTL
AEMTPGMFLDLVVQEVLEDGSVVFSGGPVPDLVLRASRYHRAGQEVESGQKKKVVILNVD
LLKLEVHVSLHQDLVNRKAKKLRKGSEHQAIVQHLEKSFAVASLIETGHLAAFSLTSHLN
DTFRFDSEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRPTRKDSETVDEDEEVD
PALTVGTIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGISPTT
KLKVGKTVTARVIGGRDMKTFKFLPISHPRFVRTIPELSVRPSELEDGHTALNTHSVSPV
EKIKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRVG
QALRATVVGPDSSKAFLCLSLIGPHKLEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSI
FHVSDSYSETPLEDFVPQKVVRCYILSTADSILTLSLRSSRTNPETKSKVEDPEINSIQD
IKEGQLLRGYVGSIQRHGVFFRLGPSVVGLARYSHVSQHSPSKKALYNKHLPEGKLLTAR
VLRLNHQKNQVELSFLPGDTGKPDLLSASLEGPLPKQEERKTEAEERDQKGEKKNQKKNE
KKNQKGQEKVELPSKEKQQPQKPQAQKRGGRERRESGSEQERVSKKPKKASPSAEDDSLM
DVYYREGKEEAEETNVLPKEKQTKPAEVPRLQLSSGFAWNVGLDSLTPALPPLAESSDSE
EDEKPHQATQKKKSKKERELEKQKAEKELSRIEEALMDPGRQPESADDFDRLVLSSPNSS
ILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTK
VFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRS
QAGASRRVLQRALECLPSKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTDVWS
VYIDMTIKHGSQKAVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKAL
EYVEAKSSVLED
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctggaagaaagcttcccccgaggaggtacaagaaagatccacaaaccagag
aaagctttccagcagtcagttgaacaagacaacttatttgatatttctactgaagaggga
tccaccaaaagaaaaaagagccagaaggggccagcaaaaacaaaaaagttgaaaatcgaa
aagagagaaagcagcaagtccgcaagagagaagtttgaaatccttagtgttgagtcccta
tgtgagggaatgcggattctgggttgtgtaaaagaggtgaatgaactggaactggtgatt
agtctccccaacggcctccaggggtttgtacaagtcactgaaatctgtgatgcctacacc
aaaaagctgaatgagcaggtgacacaagaacaacctctgaaggacctacttcacttgcct
gaacttttctcacctggaatgctggtaagatgtgtggtgagcagtctgggcatcacagac
aggggtaagaagagtgtcaagctgtctctgaaccccaaaaatgtcaacagagtgctgagt
gctgaggccctgaagcctggcatgctacttacaggtaccgtatccagcctggaagaccat
ggctacttagtggacattggtgttgatgggaccagagcttttctgccactgctgaaagcc
caggagtacatcagacagaagaacaaaggtgctaaactaaaggtgggtcagtacctgaac
tgcatcgttgaaaaggtgaaaggcaacggagaagttgttagtctgtctgttggtcactca
gaggtttctactgccattgctactgaagagcagagctggacccttaataacttactacca
ggactggtggtcaaagctcaggtgcagaaggtgactccatttggccttacactaaacttc
ctcacattcttcacgggcgtggttgattttatgcacctggatcctaagaacgctggaaca
tatttctcaaatcaggcagtgagggcttgcatcctctgcgtccatcctcgaaccagagtt
gtgcgcctgagcctgcgccccatcttcctacagcctggacgcccactcacccgactctct
tgccagaaccttggagcggtgctggatgatgttcctgtccagggttttttcaaaaaggct
ggggccaccttcaggctgaaggatgggattctggcatatgcccggctcagccatctctcg
gattctaagaatgtcttcaatcctgaggccttcaagccagggaacactcacaagtgtaga
attattgactacagccaaatggatgaactggccttgctctctctacgaacatctattatt
gaagctcagtaccttagatatcatgacatcgaacctggggcagtggtaaagggcatagtg
ctaaccataaagtcatatgggatgctggtgaaggtgggcgagcagatgaggggcctggta
cctcccatgcacctggctgacatcctgatgaagaatccggagaagaagtaccacatcggg
gatgaggtcaagtgccgggttttgctttgtgaccctgaagccaagaagctgatgatgacc
ctgaaaaaaaccctggttgagtccaaactacctgtcattacctgctatgccgatgccaag
cctggtctgcagacacatggcttcatcatcagggtcaaggactatggctgcattgtgaag
ttctacaacaatgtgcagggactggtgcccaagcatgagctcagtaccgagtatatccct
gacccagagagagttttttacattggccaggtggtgaaggttgccgtgttgaactgtgag
ccatccaaagagaggatgctcttatccttcaagctgtcgagtgatccagagccaaagaaa
gagcctgcaggacacagtcagaagaaaggaaaagccattaacattgggcagttggtagat
gtgaaggttttagagaagaccaaagatgggctggaggtggctgtcctgccgcacaacatc
cttgctttcctccccacatctcatctgtcggaccacgttgccaacggcccattgttacat
cattggctccaggcaggtgacatccttcaccgagtcctgtgtctgagccagagcgagggg
catgttcttctttgcaggaagccagccttggtctccacagtagaaggtggccaggatccc
aagaacttctcagaaatccatcctggaatgctgctcattggttttgtgaagagcatcaag
gactatggcgtgttcatccagttcccctcaggtcttagcggactggccccaaaagctatc
atgagtgataaatttgtaacctccacaagtgaccactttgttgagggccaaacagtagca
gcaaaggtgaccaatgtggatgaggagaagcagcgaatgctgctgtcactgcggctgtcg
gactgtgctctgggggacttggccaccaccagcctcctcctcctgagtcagtgcctggag
gagctgcagggcgtgcgcagcctcatgagcaaccgagactctgtgttgatccagacgctg
gctgagatgaccccaggaatgttccttgacctagtggtgcaggaggtgttggaagatggc
tctgtggtattcagtgggggtccggtgcccgatctggtcctgagagccagcagataccat
cgtgcagggcaggaggtggaatctgggcagaaaaagaaggttgtgatcttaaatgttgat
cttttgaagttggaagtgcacgtttcccttcaccaggacttggtgaatagaaaagctaaa
aagctaaggaagggcagcgaacaccaggcgattgtgcagcacttggagaagtcgtttgct
gttgcctccttgatagagactggccacctggcagctttctcccttacctctcacctcaac
gacaccttccgctttgactcagagaagttgcaggtgggacagggtgtctccctaaccctc
aagaccacagaaccaggagtgactggccttcttttggctgtggaggggccggctgccaag
aggaccatgaggccgacccggaaggactctgagacagttgatgaggatgaagaagtggat
ccagctctgactgtaggaaccataaagaagcacaccctctccatcggggacatggtcaca
gggactgtcaagtccattaagcccacccatgtggttgtgactctggaagatggcatcatt
ggctgtatccatgcctcccacattctagatgatgttccagagggcatctctcctactacc
aaactgaaggttgggaagacggtcactgcccgagtgattggtgggcgagacatgaagaca
ttcaagtttctcccaataagtcaccccagatttgttcgaaccatcccggagctgagtgtt
cggccaagtgagctggaggatggccacactgctcttaacactcactctgttagccctgtg
gagaagattaaacagtaccaggccggccagactgttacttgcttcttaaagaagtacaat
gtggtgaagaaatggcttgaggtggagattgccccagacatccgggggagaattccctta
ttgctcacttctctgagcttcaaggttctgaagcatccagataagaagttccgggttggc
caggccctgagggccaccgttgttggcccagattcctccaaggccttcttatgcctgtcc
ctcataggtcctcacaagcttgaggaaggggaagtggccatgggccgagtggtgaaggtg
actcccaatgagggactaaccgtctccttcccctttgggaagataggaacagtcagtata
tttcacgtgagtgactcctactccgagacgcccctggaagacttcgtcccccaaaaggtt
gtcagatgttacatcctgtccactgcagacagcatattgactttgtcactgcgatcatcc
aggacaaacccggagacgaaaagcaaagtagaagatccagagattaactccatccaggat
attaaggaagggcagcttctgaggggctacgtggggtccatccagcggcatggtgtgttc
tttcgccttggcccctccgttgtgggtttggctcggtactcacatgtctcccagcacagc
ccgtccaagaaagcgctttataacaaacacctccccgaagggaagctgctcacagccagg
gtcttacgcctcaaccaccagaagaaccaggtagagctgtctttcctcccgggagacact
gggaagccagacttgctttctgcttccctggaagggccacttccaaagcaagaggagagg
aaaacagaggctgaggagagagaccagaaaggggaaaagaaaaatcagaaaaagaacgag
aagaagaaccagaaggggcaggagaaggtggagctgcccagcaaggagaagcaacaaccc
cagaagccacaggcgcagaagcggggtgggcgggagcgccgggagtctgggagtgagcag
gaaagagtgagcaagaagccaaagaaagccagcccgtcagcggaggacgacagccttatg
gacgtgtactatcgggagggaaaagaggaggcagaagagacgaatgtcctgcccaaggag
aagcaaaccaagccagcagaagtgccccggctgcagctgtcctcaggcttcgcttggaat
gtgggactagactctctgaccccggccttgccacctctagcagagagctcagacagcgag
gaggatgagaagccacaccaagccacgcagaaaaagaaaagcaagaaagaaagggagttg
gagaagcagaaggcagagaaggagctgtcccgcattgaggaggcgctgatggatcctggg
cggcagccagagtctgcggatgattttgaccgactagtgctcagctcccccaacagctcc
attctgtggctgcagtacatggctttccacctgcaggccacggagatcgagaaggcccgt
gccgtggctgagagggcccttaagaccatctccttcagagaggagcaggagaagctgaat
gtgtgggtggctctgctgaacctggagaacatgtacggctctcaggagtccctgaccaag
gtctttgagcgagctgtgcagtacaatgaacctctcaaagtctttctccacctggctgac
atctacgccaagtcagagaaattccaggaagctggtgaactctacaaccggatgctgaag
cgtttccggcaggagaaagctgtgtggatcaaatacggtgccttccttctgcggaggagc
caggctggggccagtcgccgtgtgctgcagcgagccctggagtgcctgcctagcaaggag
catgtggatgtcattgccaagtttgcccagcttgagtttcagctgggggatgcagagcga
gccaaagccatttttgagaacacgctgagcacctacccaaagcgcacagatgtctggtca
gtctacattgacatgaccatcaagcacggcagccagaaggccgtccgggacatctttgag
cgggtcattcatctgagcttggctcccaagagaatgaagttcttcttcaagcgctacctg
gactacgagaagcagcatggcacagagaaggatgtgcaggcagtcaaggccaaggctctg
gagtatgtggaggccaagagctcagtgctggaggactag
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integrated database retrieval system
