Piliocolobus tephrosceles (Ugandan red Colobus): 111539535
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Entry
111539535 CDS
T07491
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111539535 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pteh03032
]
111539535 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
pteh03400
]
111539535 (TOPBP1)
DNA replication proteins [BR:
pteh03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
111539535 (TOPBP1)
DNA repair and recombination proteins [BR:
pteh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
111539535 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
111539535
NCBI-ProteinID:
XP_023063214
Ensembl:
ENSPTEG00000038032
LinkDB
All DBs
Position
2:complement(156041854..156105546)
Genome browser
AA seq
1561 aa
AA seq
DB search
MSRNDKEPFFVKFLKSSDNSKCFFKALESIKEFQSEEYLQIITEEEALKIKENDRSLYIC
DPFSGIVFDHLKKLGCRIVGPQVVIFCMHYQQCVPRAEHPVYNMVMSDVTISCTSLEKEK
REEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSK
EKKITRYTDINMEDFKCPIFLGCIICVTGLCGLDRKEVQQLTVKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNIHCVTTQWFFDSIEKGFCQDESMYKTEPRPEAKTMPNSSTPT
GQINTIDSRTLSDVSNISNINASCISESICNSLNSKLEPTLENLENLDISAFQAPEDLLD
GCRIYLCGFSGRKQDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWNKSAHRPH
VVGAKWLLECFSKGYMLSEEPYIHANYQPVEIPVSHQPESKAALLKKRNRSFSKKDFAPS
EKHEQADEDLLSQYENDSSTVVEAKTSENEKSEVRPFNDSTHAEPLNDSTHVSLQEENQS
SVSHCGPDVSTITEEGLFSQKSFLVLGFSNENESNIANIIKENAGKIMSLLSRTVADYAV
VPLLGCEVEATVGEVVTNTWLVTCIDYQTLFDPKSNPLFTPVPVMTGMTPLEDCVVSFSQ
CAGAEKESLTFLANLLGASVQEYFVRKSNAKKGMFASTHLILKEPGGSKYEAAKKWNLPA
VTIAWLLETARTGKRADESHFLIENSSKEERSLETEITNGINLNSDTAEHSGTRLQTHRK
TVITPLDMNRFQSKAFRAVVSQHARQVSASPAVGQPLQKEPSLHLDTPSKFLSKDKLFKP
SFDVKDALAALETPGRPSQQKRKLSTPLSEVIVKNLQLALANSSRNAVALSASPQLKEAQ
SEKEEAPKPLHKVVVCVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFVYQGRPNDTN
REYKSVKERGVHIVSEHWLLDCAQEYKHLPESLYPHTYNPKMSLDISAVQDGRLCNSRLL
SAVSAAKDDEPDPLILEENDVDNMATNNKESAPSNGNGKNDSKGVLTQTLEMRENFQKQL
QEIMSATSIVKPQGQRTSLSRSGCNSASSTPDSTRSARSGRSRVLEALSLSFRPLFPAVL
DFLLGGGSRHGGLSYSSTCFTVRQSRQTVPDVNTEPSQNEQIIWDDPTAREERARLASNL
QWPSCPTQYSELQVDIQNLEDSPFQKPLRDSEIAKQAVCDPGDIHVTEAPKHPISEELET
PIKDSHLIPTPQAPSIAFPLANPPVAPHPREKIITIEETHEELKKQYIFQLSSLNPQERI
DYCHLIEKLGGLVIEKQCFDPSCTHIVVGHPLRNEKYLASVAAGKWVLHRSYLEACRTAG
RFVQEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRKKIQQRQESGVVEGAFSGWKVIL
HVDQSREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSDLNKPKPDDSGVNITEAAAQNV
YCLRTEYIADYLMQESPPHVENYCLPEAISFLQNNKELGTGLSQKRKAPTEKNNIKRPRV
H
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgacaaagaaccgttttttgtgaagtttttaaagtcttcagacaattcc
aaatgtttttttaaagctctcgagtccataaaagaattccagtcagaagaatatcttcag
attattacagaagaagaggcattgaagataaaggagaatgacagatcactttatatctgt
gacccttttagtggcattgtctttgatcacctcaaaaagcttggctgcagaattgttggt
ccacaagtagtcatattttgtatgcactaccagcaatgtgtcccaagagccgaacatcca
gtttataatatggttatgtctgatgtaaccatatcttgtacaagtctggaaaaagaaaaa
agggaagaagttcataaatatgtacaaatgatgggcggacgagtatacagagaccttaac
gtatcagtaactcaccttattgcgggagaagttggtagcaaaaaatatttagttgctgca
aacctgaagaaacctattttgcttccctcttggataaaaacactttgggagaagtcaaaa
gagaaaaaaataactagatatactgatataaacatggaagatttcaagtgtcctattttt
cttggttgcataatctgtgtgactggcttatgtggcttagacaggaaggaagttcagcaa
ctcacagttaagcatggaggtcaatacatgggacaattgaaaatgaatgaatgtacgcac
ctcattgtgcaagaaccaaaaggtcagaagtatgagtgtgccaagagatggaatatacac
tgtgtgaccacgcagtggttttttgacagtatcgagaaaggtttttgtcaggatgaatcc
atgtacaagacagaacctagaccagaagcaaagactatgcccaattcttcaactcctact
ggccagatcaacacaattgatagtcgtactctttcagatgtcagcaatatttccaacata
aatgcaagttgcataagtgaatcaatatgtaattcacttaacagcaaactggagcctaca
cttgaaaatctagaaaatctggatatcagtgcatttcaagcacctgaagatttattagat
ggttgtcggatatatctttgcggttttagtggcagaaagcaagataaactgagaagactt
attaacagtggaggtggagttcgttttaaccagcttaatgaagatgtaactcatgttatt
gtgggagattatgatgatgaattgaagcaattttggaataaatcggcccacaggcctcat
gtagtgggagcaaagtggttgctggagtgtttcagtaaaggttatatgctttctgaagaa
ccatatatccatgctaattaccagccagtggaaattccagtttcacatcagcctgaaagt
aaagcagctcttttaaaaaagaggaacaggagtttctctaagaaagactttgctcctagt
gaaaagcatgagcaagctgatgaagatctgctctctcaatatgaaaatgatagctccaca
gtagttgaggctaagacgtctgaaaatgagaagtctgaagttaggccctttaatgattct
actcatgctgagcccttgaatgattcgactcacgtttctttgcaagaagaaaaccagtct
tctgtcagtcattgcggccctgatgtttctacaattactgaagaaggcttatttagccaa
aagagtttccttgttttgggttttagtaatgaaaatgaatctaacattgcaaacatcata
aaagaaaatgctgggaaaatcatgtcccttctgagcagaactgttgccgattatgctgtg
gttcctctgctggggtgtgaagtagaagccactgtgggagaagttgttacaaatacgtgg
ctggttacttgcatagactatcagactttgtttgatccaaagtcgaatcctctcttcaca
ccagtcccagtaatgacaggaatgactcctttagaggattgtgttgtttcatttagccag
tgtgctggagcagaaaaagagtctttaacattcctagcaaacctccttggagcaagtgtt
caagaatactttgttcgcaaatccaatgcaaagaaaggcatgtttgccagtactcatctt
atattgaaagaacctggtggctctaaatatgaagctgcaaagaagtggaatttacctgca
gttactatagcttggctgttggagactgctagaacgggaaagagagcagacgaaagccat
tttctgattgaaaattcatctaaagaagaacgaagtttggaaacagaaataacaaatgga
atcaatctaaattcagatactgcagagcattctggcacacgcctgcaaactcacagaaaa
accgtcattacacctttagatatgaatcgctttcagagtaaagctttccgtgctgtggtc
tcacaacacgccagacaggtttcagcctccccagcagtaggacaaccacttcagaaggag
ccctcactacacctggatacaccatcaaaattcctgtccaaggacaaactcttcaagcct
tcctttgatgtgaaggatgcacttgcagccttggaaactccaggacgtcccagccaacag
aaaaggaaactgagtacaccgctctcagaagttattgtcaaaaacttgcaacttgctttg
gcaaatagctctcgaaatgctgtcgcgctttctgccagccctcaactgaaagaggcccag
tcagagaaggaagaagccccaaagccacttcacaaagtagtggtatgtgttagtaaaaaa
ctcagtaagaagcagagtgaactaaatgggattgcagcctctctaggagcagattacagg
tggagttttgatgaaacagtgactcatttcgtctatcaagggcggccaaatgacactaat
cgggagtataaatctgtaaaagaaagaggagtacacattgtttcagagcactggctttta
gattgtgcccaagagtataaacatcttcctgaatctctttatccacatacttacaatccc
aaaatgagcttggatatcagtgcagtgcaagacggccgactctgtaatagtcgactactc
tcagctgtgtctgcagcaaaggatgacgagccagatcctttgattttagaagaaaatgat
gtagacaatatggccaccaataataaagaatcggcaccatcaaatggaaatggaaagaat
gactctaaaggagttctgacacagactttagagatgagagagaactttcagaagcagtta
caggagataatgtctgcaacgtcaatagtgaaaccccaagggcagaggacttccctttca
agaagtggttgtaacagtgcatcttcaacccctgacagcactcgctctgctcgcagtgga
cgaagtagagtcctagaggcactgagcttgtccttccgtcccttgttcccagcagttcta
gacttcttactcggaggtggcagcagacatggaggtttgtcttacagcagcacctgcttc
acagtgaggcagtctcgtcaaacagtacctgatgtcaacacagagccttcccaaaatgaa
cagatcatttgggatgaccctacagcaagggaggagagagcaaggcttgccagcaatttg
cagtggcctagttgtcccacacaatactctgagcttcaggttgacattcaaaacttggag
gattctccttttcaaaagcctttgcgtgattcagaaattgctaaacaggctgtctgtgat
cctggagacatacatgtgactgaagctcccaaacacccaatctctgaagaactggaaact
cccataaaagacagccacctgatccctacgcctcaagcccccagtattgcctttccgctt
gccaacccccctgtggctccacaccctagagaaaagattataacgatagaggagactcat
gaagaattaaaaaaacagtacatatttcagttatcatctctgaatcctcaagaacgtatt
gactattgtcatctgattgagaaactaggtggattggtgatagaaaagcagtgctttgat
cccagctgtacacacattgttgtgggacatccccttcgaaatgagaagtatttagcctca
gtggcggctgggaagtgggtgcttcatcgctcctaccttgaagcatgcaggactgctgga
cgcttcgtgcaggaagaagactatgaatgggggagtagttccatacttgatgttttgact
ggaatcaatgtacagcaacgaagactagcacttgcagcaatgagatggagaaaaaaaatc
cagcaaagacaagaatctggcgttgttgagggagcatttagtgggtggaaggttatttta
catgtggatcagtctcgagaagcaggcttcaaacgccttcttcagtcaggaggagcaaag
gtgctacctggtcattctgtacctttatttaaagaggccacacatcttttttctgacttg
aataaaccgaaaccagatgactcaggagttaatataacagaagctgctgcccagaacgtg
tactgcttgagaacagaatacattgctgattatctcatgcaggaatcacctcctcatgta
gaaaattactgtctaccagaagctatttcatttcttcagaataataaggaacttgggact
ggattatcacaaaagaggaaagctcctacagaaaaaaataacatcaaacgacctagagta
cactaa
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integrated database retrieval system
