Piliocolobus tephrosceles (Ugandan red Colobus): 111540452
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Entry
111540452 CDS
T07491
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111540452 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pteh03019
]
111540452 (PAN3)
Messenger RNA biogenesis [BR:
pteh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111540452 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
111540452 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Pkinase
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
111540452
NCBI-ProteinID:
XP_023064509
Ensembl:
ENSPTEG00000018809
LinkDB
All DBs
Position
X:complement(87607668..87770728)
Genome browser
AA seq
1069 aa
AA seq
DB search
MPPGARRRPGFPSRSRYPQALASRRARAAATAVSGRGKWNKQLGGTRARESEWRQNLKIN
RPLRPPHPLAAAAPSSPARALEVPVWARAPTPSSRAAPLRKENERVSERESQLSPYPPSF
YPLLPPLSPPPSPRAAPAPAAGQTHPPRLLSGTGSVFLSSPVYGGGGGGSSGGGGRRGCG
VAMNSGGGLPPPSAAASPSSSSLAAAVAVVAPPGVGGVPGGAAVGVKLKYCRYYAKDKTC
FYGEECQFLHEDPAAGAAPGLGLHSNSVPLALAGAPVAGFPPGAVPGGGAGPPPGPKKPD
LGDPGTGAAAGGGGSSGGLDGPRLAIPGMDGGALTDTSLTDSYFSTSFIGVNGFGSPVET
KYPLMQRMTNSSSSPSLLNDSAKPYSGHDPLTSPASSLFNDFGALNISQRRKPRKYRLGM
LEERLVPMGSKARKAKNPIGCLADRCKSGVPINMVWWNRVTENNLQTPNPTASEFIPKGG
SSSRLSNVSQSNMSAFSQVFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPR
RRSHTPNPASYMVPSSASTSVNNPVSQTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMVF
PNYHIYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDS
YHSLFPLEPLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVD
MWKKIQHSNIVTLREVFTTKAFAEPSLVFAYDFHAGGETMMSRHFNDPNADAYFTKRKWG
QHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILITGKTRLRVNC
VGVFDVLTFDNSQNNNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELVT
VNYSSDLKNLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNG
RLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISC
LNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgggggcccgacgccggccaggcttcccctcgcgctcccgctacccacaagcc
ctcgcgtctcggcgcgcacgcgcagcggcgacggccgtctcaggaagaggaaaatggaat
aaacaactcggaggaaccagagcgcgagagagcgagtggaggcagaatttaaaaataaac
cggcccctccgccctccccacccgcttgccgctgccgctccctcttcccctgcccgcgcc
ctcgaagtccccgtctgggcccgcgcgcccaccccgtcgtcccgcgcggcccctttaaga
aaagagaacgagagagtgagtgagagagaatcccaactctccccctaccctccctccttc
taccccctcctccctcccctctcccctcccccctctccccgggcggctccggctcccgca
gcgggacagacccacccgcccaggcttttatccggcaccggcagcgtcttcctttcctcc
cccgtctatggtggcggcggcggcggctcctcgggcggcggcggaagacgaggctgcggc
gttgccatgaacagtggcggcggcctcccgcccccttcggccgccgcctccccttcctcc
tcctcgctggcggcggcggtggcggtggtggccccgccgggggtcgggggtgtccccggc
ggggcggcggtaggagtgaagctaaagtactgccgctactacgctaaggataagacttgc
ttctacggggaggagtgtcagttcctgcatgaggaccctgccgccggggctgccccgggc
ctcggcctccatagcaacagcgtccccctggctctggctggtgcacccgtggccggcttt
ccgcccggagccgtcccgggcgggggagctgggccgccccccgggcccaagaagccggac
ctgggggacccggggacaggagccgcagccggcggaggaggcagcagcgggggactcgat
ggaccgcggttggcaattccaggaatggatggaggtgctttaactgatacaagtctcaca
gattcctattttagcaccagctttattggagtcaatggatttggaagccctgtagaaaca
aaatatcccctgatgcagagaatgactaatagtagcagctccccaagccttctaaacgac
agtgccaagccatattcaggccatgatcctctaacttcacctgcttcatccttgtttaat
gactttggtgccctcaacatctctcagagacgaaagccaaggaagtatcgcctggggatg
ctggaggagaggctagttccgatgggatcaaaggcacgaaaagcaaagaaccctattggc
tgccttgctgacaggtgtaaatcaggagtacccatcaatatggtttggtggaacagagtc
acagaaaacaatttacagacaccaaatcctaccgcaagcgagtttattcctaaaggagga
tcatcctccaggctgagtaacgtgtcccagtcaaatatgtctgccttctctcaagttttc
tctcacccatccatgggaagccctgctactgctggattagcaccaggaatgtcgttgtct
gctgggtcttcccctcttcattcccccaagattactccacatacttctcctgctcccaga
agaagaagtcacactccaaatccagcaagttacatggtgccttctagtgcctctacatct
gttaataatcctgtttctcagactccatcttctggtcaggtgatccaaaaggaaactgtt
ggtggaacgacttacttctatacagacacaactccagcacctttgactggaatggtgttt
ccaaactatcatatttatcctccgactgcacctcatgttgcttatatgcaaccgaaagca
aatgcaccttccttcttcatggccgatgaactccgacaggagctgatcaacagacattta
ataacaatggctcaaattgatcaagcagatatgccagcagttcctacagaggttgacagc
taccatagcctatttcctctagaaccactgccacctcccaaccggatacagaaatcaagt
aattttgggtatattacatcttgctacaaagctgtaaatagcaaagatgatctgccatat
tgccttcggaggatacatggttttcgtcttgttaacacaaagtgcatggtgttggtcgac
atgtggaagaaaattcaacactcaaatatcgtaaccttgcgcgaagtattcaccactaaa
gcatttgccgagccctctcttgtgtttgcatatgatttccatgctggaggagaaactatg
atgagcagacactttaatgaccctaatgctgatgcctatttcaccaagagaaagtggggt
caacatgatggaccattgcccaggcaacatgctggattattgccagaatctcttatttgg
gcatatattgtccaactaagttctgcattgcgtaccattcatacagcaggtttggcatgt
cgagttatggatccaacaaagattctaataactggcaaaacaaggttgcgagtaaattgt
gttggagtttttgatgttttaacatttgataacagtcaaaataataatccattggcatta
atggcccagtaccagcaagcagatctgatatcattaggaaaagttgtgttggctttggct
tgcaactctttggcaggaattcagcgagagaatttacagaaagccatggaactggtgaca
gtcaactattcctctgacctgaagaatctgattttgtatttgttgactgaccaaaacagg
atgcgaagtgtaaatgacatcatgcccatgattggtgctcgattttatactcaactggat
gctgctcaaatgagaaatgatgtcatagaggaagaccttgcaaaggaggttcaaaatgga
agactgtttaggctcctagcaaaattgggaacaatcaatgagaggccggagtttcagaag
gatccaacttggtcagagactggagaccgttatctgttgaaactctttagggatcatctt
tttcatcaggtgacagaagcgggtgctccctggattgacctcagtcatatcatttcttgt
cttaacaagctagatgctggtgtgccagaaaaaataagcctgatttccagagatgagaag
agtgtactcgtggtgacctacagtgacttaaagcgctgctttgaaaatacttttcaagaa
ctgattgcagctgcgaatggtcagttgtag
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