Piliocolobus tephrosceles (Ugandan red Colobus): 111540466
Help
Entry
111540466 CDS
T07491
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03410
Base excision repair
pteh04140
Autophagy - animal
pteh04217
Necroptosis
pteh04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111540466 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111540466 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
111540466 (HMGB1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
111540466 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pteh03036
]
111540466 (HMGB1)
03400 DNA repair and recombination proteins [BR:
pteh03400
]
111540466 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pteh04147
]
111540466 (HMGB1)
Chromosome and associated proteins [BR:
pteh03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
111540466 (HMGB1)
DNA repair and recombination proteins [BR:
pteh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
111540466 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
111540466 (HMGB1)
Exosome [BR:
pteh04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111540466 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
111540466
NCBI-ProteinID:
XP_026310020
Ensembl:
ENSPTEG00000020101
UniProt:
A0A8C9GG76
LinkDB
All DBs
Position
X:85585621..85591759
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg
caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagatatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacctatatccct
cccaaaggggagacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gccttcttcctgttctgctctgagtatcgcccaaaaatcaaaggagaacatcctggcctg
tccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcagatgac
aagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaaggatattgct
gcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaggag
gaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataa
DBGET
integrated database retrieval system
