Piliocolobus tephrosceles (Ugandan red Colobus): 111541368
Help
Entry
111541368 CDS
T07491
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111541368 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pteh03019
]
111541368 (EDC4)
Messenger RNA biogenesis [BR:
pteh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111541368 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
111541368 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_TEP1_2nd
DUF445
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_HPS5
WDR55
EIF3I
Motif
Other DBs
NCBI-GeneID:
111541368
NCBI-ProteinID:
XP_023065979
Ensembl:
ENSPTEG00000015168
LinkDB
All DBs
Position
17:52701364..52714026
Genome browser
AA seq
1451 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGCSASSFNVWVEGPSAESPRPSSAYNGDLNGLL
VPDPLCSGDGTSTNKTGLRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSI
SSKARGSNKVKIQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSE
RTLLKGFTGSVADLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTP
LNHFRRIIWCPFIPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHSTWPVDVSQIKQ
GFIVVKGHSTCLSEGALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPL
SCLLFCDNHKKQDPDVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPP
SLKVCLDLSAEYLILSDVQRKVLYVMELLQNQEEGHACFSSISEFLLTHPVLSFGIQVVS
RCRLRHTEVLPAEEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLN
PDVVAPLPTHTAHEDFTFGESRPELGSEGLGSAAHGSQPDLRRIVELPAPANFLSLSSET
KPKLMTPDAFMTPSASLQQITASPSSSSSGSSSSSSSSSSSSSLTAVSAMSSTSAVDPSL
TRPPEELTLSTKLQLDGSLTMSSSGSLQASPRSLLPGLLPAPADKLTPKGPGQVPTAASA
LSLELQEVEPLGLPQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEP
DSMASAASALHLLSPRPRPGPELGPQLGLDGGPGDGDRHSTPSLLEAALTQEASTPDSQV
WPTAPDITRETCSTLAESPRNGLQEKHKSLAFHRPPYHLLQQRDSQDASAEQSDHDDEVA
SLASASGGFGTKVPAPRLPAKDWKTKGSPRTSPKLKRKSKKDDGDAAMGSRLTEHQVAEP
PEDWPALIWQQQRELAELRHSQEELLQRLCTQLEGLQSTVTGHVERALETRHEQERILET
GSTTWHRDGGSILGLGRSTRPAPGLFLSYGAERRLERALAEGQQRGGQLQEQLTQQLSQA
LSSAVAGRLERSIRDEIKKTVPPCVSRSLEPMAGQLSNSVATKLTAVEGSMKENISKLLK
SKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGTQEYLQ
QLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATVASSVRAEVQHQLHVAVGS
LQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPSAHLDCQAQQAHILQ
LLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLLSLIQQLASDLG
TRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNSLGKAARRLSL
MLHGLVTPSLP
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatcctc
aagctggaccgacccgcgggcggctgttctgcttcgtccttcaacgtctgggttgaaggc
cccagtgcagagagcccacggccatccagtgcctacaatggggacctcaatgggcttctg
gtcccagacccgctctgctcaggtgatggtacctcaacaaacaagactggtcttcggacc
atgccacccattaacctgcaagagaagcaggtcatctgtctctcaggagatgatagctcc
acctgcattgggattttggccaaggaggtagagattgtggccagcagtgactctagcatt
tcaagcaaggcccggggaagcaacaaggtgaaaattcagcctgtcgccaagtatgactgg
gagcagaagtactactatggcaacctgattgctgtgtctaactccttcttggcctatgcc
attcgagctgccaacaatggctccgccatggtgcgggtgatcagtgtcagcacttcggag
cggaccttgctcaagggcttcacaggcagtgtggctgatctggcttttgcacacctcaac
tctccacagctggcctgcctggatgaggcaggcaacctgttcgtgtggcgcttggctctg
gttaatggcaaaattcaagaagagatcttggtccacattcggcagccagagggcacgcca
ctgaaccactttcgcaggatcatatggtgccccttcatccctgaggagagtgaggactgc
tgtgaggagagcagcccaacggtggccctgctgcatgaagaccgggctgaggtgtgggac
ctggacatgctccgctccagccacagcacctggcctgtggatgtcagccagatcaagcag
ggcttcattgtggtaaaaggtcatagcacgtgcctcagtgaaggagctctatcccctgat
gggactgtgctggctactgcgagccatgatggctatgtcaagttctggcagatctacatt
gaggggcaagatgagccaagatgtctgcacgagtggaagcctcatgatgggcggcccctc
tcctgcctcctgttctgtgacaaccataagaaacaagaccctgatgtccctttctggagg
ttccttattactggtgctgaccagaaccgagagctaaagatgtggtgtacggtgtcctgg
acctgcctgcagactattcgcttctccccagatatcttcagctcagtgagtgtgccccct
agcctcaaggtttgcttggacctgtcagcagaatacctgattctcagcgatgtgcaacgg
aaggtcctctatgtgatggagctgctgcagaaccaggaggagggccatgcctgcttcagc
tccatctcggagttcctgctcacccaccctgtgctgagcttcggtatccaggttgtgagt
cgctgccggctgcggcacactgaggtgctgcctgccgaagaggaaaatgacagcctgggt
gctgatggtacccacggagctggtgccatggagtctgcggccggtgtgcttatcaagctc
ttttgtgtgcatactaaggcactgcaagatgtgcagatccgcttccagccacagctgaac
cctgatgtggtggccccactccccacccacactgcccacgaggacttcacatttggagag
tctcggcctgaactgggctctgagggcctggggtcagccgctcacggctcccaacctgac
ctccgacgaatcgtggagctgcctgcacccgccaacttcctcagtctgagcagtgagacc
aagcccaagttgatgacacctgacgccttcatgacacctagcgcctccttgcagcagatc
actgcctctcccagcagtagcagcagtggtagcagcagcagcagcagcagcagcagcagc
agcagctcccttacagctgtgtctgccatgagcagcacctcagctgtggacccctccttg
accaggccacctgaggagctgactttgagcaccaagctgcagctggatggcagcctgaca
atgagcagcagcggcagcctgcaggcaagcccacgcagcctcctgcccggcctgctccca
gccccagctgacaaactgactcccaaggggccgggccaggtgcctactgccgcctctgca
ctgtccctggagctgcaggaagtggagcccctggggctgccccaagcctcccctagccgc
acccgttcccctgatgtcatctcctcagcttccactgccctgtcccaggacatccctgag
attgcatctgaggccctgtcccgtggttttggctcctctgcaccagagggccttgagcca
gacagtatggcttcagccgcctcagcactgcacctactgtccccacggccccggccaggg
cccgagctcggcccccagcttggccttgatggaggccctggggacggagatcggcatagt
accccctccctcctggaggcagccttgacccaggaggcctcgactcctgacagtcaggtt
tggcccacagcacctgacattactcgtgagacctgcagcacactggcagaaagccccagg
aatggccttcaggaaaagcacaagagcctggccttccaccgaccaccatatcacctgctg
cagcaacgtgacagtcaggatgccagtgctgagcaaagtgaccatgatgatgaggtggcc
agccttgcctctgcttcaggaggctttggcaccaaagttcctgctccacggctgcctgcc
aaggactggaagaccaagggatcccctcgaacctcacccaagctcaaaaggaaaagcaag
aaggatgatggggatgcagccatgggatcccggctcacagagcaccaggtggcagagccc
cctgaggactggccagcgctaatttggcaacagcagagagagctggcagagctgcggcac
agccaagaagagctgctgcagcgtctgtgtacccaacttgaaggcctgcagagcacagtc
acaggccacgtagaacgtgcccttgagacccggcacgagcaggagcgtatccttgagact
ggtagcacaacatggcatagggatgggggcagcattcttggcctgggaaggagtacacga
cctgctccaggcctgttccttagctatggcgcagagcggcggctggagcgagcactggct
gaggggcagcagcggggagggcagctgcaagagcagctgacacagcagttgtcccaagca
ctgtcttcagctgtagctgggcggctagagcgcagcatacgggatgagatcaagaagaca
gtccctccatgtgtctcaaggagtctggagcctatggcaggccaactgagcaactcagtg
gctaccaagctcacagctgtggagggcagcatgaaagagaacatctctaagctgctcaag
tccaagaacttgactgatgccatcgcccgagcagctgcagacacattacaggggccgatg
caggcggcctaccgggaagccttccagagtgtggtgctgccggcctttgagaagagctgc
caggccatgttccagcagatcaatgatagcttccgactggggacacaggaatacttgcag
cagctagaaagccacatgaagagccggaaggcacgggaacaggaggccagggagcctgtg
ctggcccagctgcggggcctggtcagcacactgcagagtgccactgagcagatggcagcc
accgtggccagcagtgttcgggctgaggtgcagcaccagctgcatgtggctgtgggcagc
cttcaggagtccattttagcacaggtacagcgcattgtcaagggtgaggtgagtgtggcg
ctcaaggagcagcaggctgccgtcacctccagcatcatgcaggccatgcgctcagctgct
ggcacacctgtcccctctgcccatcttgactgccaggcccagcaagcccatatcctgcag
ctgctgcagcagggccacctcaatcaggccttccagcaggcactgacagctgctgacctg
aacctggtgctgtatgtgtgtgaaactgtggacccagcccaggtttttgggcagccaccc
tgcccactctctcagcctgtgctcctttccctcatccagcagctggcatctgaccttggc
actcgaactgacctcaagctcagctacctggaagaggctgtgatgcatctggaccacagt
gaccccatcactcgggaccacatgggctccgttatggcccaggtgcgccaaaagcttttt
cagttcctgcaggctgagccacacaactcacttggcaaagcggcccggcgtctcagcctc
atgctgcatggtctcgtgacccccagcctcccttag
DBGET
integrated database retrieval system
