Piliocolobus tephrosceles (Ugandan red Colobus): 111541401
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Entry
111541401 CDS
T07491
Symbol
VPS4A
Name
(RefSeq) vacuolar protein sorting-associated protein 4A isoform X1
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03250
Viral life cycle - HIV-1
pteh03272
Virion - Hepatitis viruses
pteh04144
Endocytosis
pteh04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111541401 (VPS4A)
03272 Virion - Hepatitis viruses
111541401 (VPS4A)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111541401 (VPS4A)
09143 Cell growth and death
04217 Necroptosis
111541401 (VPS4A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pteh04131
]
111541401 (VPS4A)
03400 DNA repair and recombination proteins [BR:
pteh03400
]
111541401 (VPS4A)
Membrane trafficking [BR:
pteh04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
111541401 (VPS4A)
DNA repair and recombination proteins [BR:
pteh03400
]
Eukaryotic type
Check point factors
Other check point factors
111541401 (VPS4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
TIP49
AAA_16
AAA_22
AAA_14
AAA_5
RuvB_N
AAA_25
IstB_IS21
DUF815
AAA_17
AAA_2
AAA_18
NPHP3_N
AAA_33
nSTAND3
RNA_helicase
AAA_24
PhoH
ResIII
AAA_28
AAA_7
Mg_chelatase
NACHT
Parvo_NS1
bpMoxR
YhdB
AAA_30
Motif
Other DBs
NCBI-GeneID:
111541401
NCBI-ProteinID:
XP_023066054
Ensembl:
ENSPTEG00000010024
UniProt:
A0A8C9GXN1
LinkDB
All DBs
Position
17:54198289..54211586
Genome browser
AA seq
437 aa
AA seq
DB search
MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKC
VQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVME
KPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV
ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE
SEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARA
QMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHFKKVCG
PSRTNPSVMIDDLLTPCSPGDPGAMEMTWMDVPGDKLLEPVVCMSDMLRSLATTRPTVNA
DDLLKVKKFSEDFGQES
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtcaaccctccagaaagccattgatctggtgacgaaagccacagaagaggac
aaagccaagaactacgaggaggcgctgcggctgtaccagcatgcggtggagtacttcctc
cacgccatcaagtatgaggcccacagcgacaaggccaaggagagcattcgagccaagtgc
gtgcagtacctagaccgggctgagaagctgaaggattatttacgaagcaaagagaaacac
ggcaagaagccagtcaaagagaaccagagtgagggcaagggcagtgacagtgacagtgaa
ggggataatccggagaagaagaaactgcaggaacagctgatgggtgccgttgtgatggag
aaacccaacatacggtggaacgacgtggccgggctggagggggccaaggaggccctcaaa
gaagctgtcattttgccaatcaaattcccacatttgttcacaggcaagcgcaccccctgg
cgggggattctgctgttcggaccccctggcacagggaaatcctacttggccaaagccgtg
gcaacagaggccaacaactccaccttcttctctgtgtcctcctcagacctcatgtccaag
tggctgggggagagtgaaaagctggtcaagaacctgtttgagctggccaggcagcacaag
ccctccatcatcttcatcgacgaggtggattccctctgcggatcccgaaatgaaaatgag
agcgaggccgcccggaggatcaaaacggagttcttggtccagatgcagggggtggggaat
aacaatgatgggactctggttcttggagccacgaacataccatgggtgttggattcggcc
atcaggaggaggtttgaaaagcgaatttacatccccttgccggaggaagctgcccgtgcc
cagatgttccggttgcatctggggagcactccccacaacctcacggatgcaaacatccac
gagctggcccggaagacggaaggctactcgggtgcggacatcagcatcatcgtgcgggac
tccctcatgcagcccgtgaggaaggtgcagtcagccacacacttcaaaaaggtctgtggc
ccctcccgtaccaaccccagcgtgatgatcgatgacctcctaaccccatgctcaccaggg
gacccaggagccatggagatgacgtggatggatgtccctggggacaaactcttagagcct
gtggtttgcatgtcggacatgctgcggtctctggccaccacccggcccacggtgaatgca
gacgacctcctgaaagtgaagaaattctcagaggactttgggcaggagagttaa
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