Piliocolobus tephrosceles (Ugandan red Colobus): 111543373
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Entry
111543373 CDS
T07491
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pteh04131
]
111543373 (VPS13A)
Membrane trafficking [BR:
pteh04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
111543373 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
111543373
NCBI-ProteinID:
XP_026308842
Ensembl:
ENSPTEG00000038139
LinkDB
All DBs
Position
14:91206124..91441288
Genome browser
AA seq
3009 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVDLDTSQLSLGIWQGAVALKNLHIKENALSQLDVPFKVKVG
HIGNLKLIIPWKNLYTQPVEAVLEEIYLLIVPSSRIKYDPLKEEKQLMEAKQQELKRIEE
AKQKVVDQEQHLPEKQDTFAEKLVTQIIKNLQVKISSIHIRYEDDITNRDKPLSFGISLQ
NLSMQTTDQYWVPCLHDETEKLVRKLIRLDNLFAYWNVKSQMFYLNDYDDSLDDLRNGIV
NENIVPEGYDFVFRPISANAKLVMNRRSDFDFSAPKINLDVELHNIAIEFNKPQYFSIME
LLESVDMMTQNMPYRKFRPDVPLHHHAREWWAYAIHGVLEVNVCPRLRMWSWKHIRKHRG
KMKQYKELYKKKLTSKKLPGELLVSLEELEKTLDVLNITIARQQAEVEVKKAGYKIYKEG
VKDPEDNKGWFSWLWSWSEQNTNEQQPDVKPGILEEMLTPEEKALLYEAIGYSETAVDPT
LPKTFEALKFFVHLKSMSVVLRENHQKPELIDIVIEEFSTLIVQRPGAQAVKFETKIDSF
HITGLPENSEKPRLLSSLDDAMSLFQITFEINPLDETVAQRCIIEAEPLEIIYDARTVNS
IVEFFRPPKEVHLAQLTSATLTKLEEFRNKTATVVSNLEHCKNSIQTSTSLGTSQISQRI
IPLLELPSVSEDDSEEEFFDAPCSPLEEPLQLPTGVKSIRTRKLQKQDCSVNMTTFKIRF
EVPKVLIEFYHLVGDCELSVVEIHVLGLGTEIEIRTYDLKANAFLKEFCLKCPEYLDENR
KPVYLITTLDNTMEDLLTLEYVKAERNVPNLKSTYNNVLQLIKVNFSSLDIHLHTEALLN
TINYLHNILPQSEENSAPVSTTETEDKGDVIKKLALKLSTNEDIITLQILAELSCLQIFI
QDQKRNISEIKIEGLDSEMIMRPSETEINAKLRNIIVLDSDITAVYKKAVYITGKEVFSF
KMVSYMDATAGSAYTDMNVFDIQVNLVVGCIEVVFVTKFLYSILAFIDNFQAAKQALAEA
TVQAAGMAATGVKELAQRSSRMALDINIKAPVVVIPQSPVSENVFVADFGLITMTNTFHM
ITESQSSPPPVIDLITIKLSEMRLYRSQFINDAYQEVLDLLLPLNLEVVVERNLCWEWYQ
EVPCFNVNAQLKPMEFILSQEDITTIFKTLHGNIWYEKDGSALPAVTKDQYIATSGVTTN
ASHHSGGVTVVTAAVVEVHSRASLVKTTLNMSFKTDYLTMVLYSPGPKQASFTDVRDPSL
KLAEFKLENIISTLKMYTDDSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMM
DIKYRKVRDGCVTDAVFQEMYICASVEFLQTVANVFLEAYTTGTAVETSVQTWTAKEEVP
TQESEKWEINVIIKNPEIVFVADMTKNDAPALVITTQCEICYKGNLENSTMTAAIKDLQV
RACPFLPVKRKGKVTTVLQPCDLFYQTTQTGTDPQVIDMSVKSLTLKVSPVIINTMITIT
SALYTTKETIPEETASSTAHLWEKKDTKTLKMWFLEESNETEKIAPTTELVPKGEMIKMN
IDSIFIVLEAGIGHRTVPMLLAKSRFSGEGKNWSSLINLHCQLELEVHYYNEMFGVWEPL
LEPLEIDQTEDFRPWNLGIKMKKKAKKAIVESDPEEENYKVPEYKTVISFHSKDQLNITL
SKCGLVMLNNLGKAFTEAATGSSADFVKDLAPFIILNSLGLTISVSPSDSFSVLSIPMAK
SYVLKNEESLSMDYVRTKDNDHFNAMTSLSSKLFFILLTPVNHSTADKIPLTKVGRRLYS
VRHRESGVERSIVCQIDTVEGSKKVTIRSPVQIRNHFSVPLSVYEGDTLLGTASPENEFN
IPLGSYRSFLFLKPEDEDYQMCEGIDFEEIVKNDGALLKKKCRSKNPSKQSFLINIVPEK
DNLTSLSVYSEDGWDLPYIIHLWPPILLRNLLPYKIAYYIQGIENSVFTLNEGHSDQICT
VQLDKARLHLKLLDYLNHNWTSEYHVKPNQQDISFVNFTCVTEMEKTDLDIAVHMTYNTG
QTVVAFHSPYWMVNKTGRMLQYKADGIHRKHPPNYKKPVLFSFQPNHFFNNNKVQLMVTD
SELSDQFSIDTVGSHGAVKCKGLKMDYQVGVTIDLSSFNITRIVTFTPFYMIKNKSKYRL
SVAEEGTDKWLSLDLEQCIPFWPEDASSKLLIQVEGSEDPPKRIYFNKQENCILLRLDNE
LGGIIAEVNLAEHSTVITFLDYHDGAATFLLINHTKNELVQYNQSSLSEIEDSLPPGKAV
FYTWADPVGSRRLKWRCRKSHGEVTQKDDMMMPIDLGKKTIYLVSFFEGLQRIILFTEDP
KVFKVTYESEKAELAEQEIAVALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKAR
WKPMSVKHTEKLEREFKEYTESSPSEDKVIELDTNIPVRLTPTGHNMKILQPRVIALRRN
YLPALKVEYNTSAHQSSFRIQIYRIQIQNQIHGAVFPFVFYPVKPPKSVTMDSAPKPFTD
VSIVMRSAGHSQISRIKYFKVLIQEMDLRLDLGFIYALTDLMTEAEVTENTEVELFHKDI
EAFKEEYKTASLIDQSKVSLYEYFHISPLKLHLSVSLSSGGEEAKDSKQNGGLIPVHSLN
LLLKSIGATLTDVQDVVFKLAFFELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDV
LGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKIT
GAMAKGVAAMTMDEDYQQKRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKG
AQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATETSEVESLRPPRFFNED
GVIRPYRLRDGTGNQMLQVMENGRFAKYKYFTHVMINKTDMLMITRCGVLFVTKGTFGQL
TCEWQYSFDEFTKEPFIVHERRLRIEAKERVKSVFHAREFGKIINFKTPEDARWILTKLE
EAREPSPSL
NT seq
9030 nt
NT seq
+upstream
nt +downstream
nt
atggttttcgagtcggtggtcgtggacgtattgaaccggttcttgggggactatgtggtg
gatctggacacgtcccagctctctctgggcatctggcaaggagctgtggccctcaagaat
cttcacattaaagaaaatgccctgagtcaactggatgtaccatttaaagttaaagttggt
cacataggtaatctgaaacttataattccatggaaaaacctttatactcaacctgttgaa
gctgtattggaagaaatttatttactcatagtgccttcttctagaataaaatatgatcct
ttaaaagaagagaaacaactcatggaagcaaagcaacaggaactgaaaagaatagaagaa
gcaaaacaaaaagtagttgatcaagaacaacatctgccggaaaaacaggacacttttgca
gaaaaattagttacacagatcataaaaaatcttcaagtgaaaatttccagtatccatatt
cgttatgaagatgatatcacaaatcgggacaaaccgctgtcatttggtatttcccttcag
aatctcagcatgcagacaactgatcaatactgggttccatgtttacatgatgaaactgag
aaactagttcgtaagttaatccgattggataacctttttgcctattggaatgtgaagtct
cagatgttttatcttaatgattatgatgactccttggatgacttgaggaatggcattgtc
aatgaaaatattgttccagaaggttatgattttgtatttcgtcccatatctgctaatgcc
aaacttgtgatgaatcgccgatctgattttgacttttctgcccccaaaataaacttggat
gttgagttacataacatagcaattgaatttaataaaccacagtatttcagtattatggag
cttcttgaatcagttgatatgatgacacaaaatatgccatataggaagttcagacccgac
gtgcctcttcaccaccatgccagagaatggtgggcttatgctatacatggtgttcttgaa
gtaaatgtttgccccaggttacggatgtggtcatggaagcatattaggaaacatagggga
aaaatgaagcaatataaagaactgtataaaaaaaagttaacaagtaagaagctgcctggt
gaacttctcgtgtctttagaggagttggaaaaaaccttggatgtccttaatataactata
gctagacagcaggcagaagttgaggtaaagaaagctggatacaaaatttacaaagaagga
gtaaaagatccagaggataataaagggtggtttagctggctatggtcttggtcagaacaa
aatactaatgaacagcaaccagatgttaaacctggaattcttgaagaaatgttgacacct
gaagaaaaagctttactctatgaagcaattggctatagtgaaacagcagttgatccaact
ttgccaaaaacatttgaagccttgaagttttttgtccacttgaaaagtatgtctgttgtt
ctaagagaaaatcatcaaaaacctgagctgatagatattgtaatagaagaatttagcacc
ttaattgtgcaaagaccaggagcgcaagcagtaaaatttgaaactaaaatagattcattt
catattactggcttaccagaaaattcagaaaaaccccgcctcctgtcttcattggatgat
gcaatgtcactcttccaaattacatttgagataaatccattagatgaaactgttgctcag
aggtgtatcatagaagctgaacctttagaaatcatatatgatgcaaggacagtgaatagt
atagtggaattcttcagacctccaaaagaggtacatctagcacagctcacttcagcaact
ttgacaaaactagaagaatttcgcaataagacagcaacagtagtttcaaacttggaacat
tgcaaaaatagtattcaaacatctacttctttgggaacatcacagatttcacagagaata
attcctctcttggaacttccgtctgtttctgaagatgattcagaggaggaattttttgat
gcaccgtgtagtcccttggaagaacctcttcagttgccaactggagttaaaagtattcga
accagaaagttacaaaagcaggattgttcagtaaatatgactacgtttaaaatacgattt
gaagtaccaaaggttttgatcgagttttatcaccttgttggagattgtgaactatctgtg
gtagaaattcatgttttaggattgggcacagaaattgagattagaacatacgatttgaaa
gcaaatgcctttttgaaagagttctgcttaaaatgcccagaatacttggatgaaaacagg
aaaccagtttatttgattacaaccctggataacacaatggaagacctgttaactctggaa
tatgtaaaggctgaacggaatgtacccaacttgaaaagtacctataacaatgttttacaa
ttgattaaggtaaatttttcctctttggatattcatttacacactgaagcacttctgaat
acaataaattatcttcataatatccttccgcaatcagaggaaaattcagccccagtgtcc
actacagagactgaagacaaaggagatgtcattaaaaaattagctttaaaactatccacg
aatgaagatatcattactttgcagattttagcagaattatcatgtttacagatctttatt
caagatcagaaacgtaacatttctgaaattaagattgaagggcttgattctgagatgatt
atgaggccttcagaaactgaaataaatgcaaagctaaggaatataattgttttagattct
gatataacagctgtatacaaaaaggctgtttatatcactggaaaagaagttttcagcttc
aaaatggtttcttacatggatgcaactgctggttctgcatacacagatatgaatgtgttt
gacattcaggttaatttagtagttggttgcattgaagtagtttttgtcacaaaatttcta
tattctatattggcttttatagataattttcaggcagctaaacaagctttggctgaggca
actgttcaggcagctggaatggctgctactggtgtaaaagaactggcacaaaggagttcc
agaatggcactggatattaacatcaaagccccagttgtggtcatcccgcagtctccagtt
tctgaaaatgtttttgttgctgattttgggctaattacaatgacaaatacctttcatatg
ataacagagagccagagctctcccccacctgttattgatttgataacaataaagctgagt
gaaatgcgactatacagatctcagtttattaatgatgcataccaggaagtactggatcta
ctactgccattaaatctggaggtggtggttgaacgaaatttatgctgggagtggtaccag
gaagttccttgttttaatgtaaatgctcaactgaaaccaatggagttcattcttagtcaa
gaagatataacaactatttttaaaacattgcatggcaatatatggtatgaaaaagatggt
agtgccttacctgctgtaacaaaagaccaatacattgccactagtggagttactactaat
gcttcacaccattcaggaggagtaactgtggtgacagctgccgtggtagaagtacattca
cgtgcctcactagttaagacaacactaaacatgagcttcaaaactgattatctcaccatg
gtgctgtatagtccaggtcctaaacaagcttcctttacagatgttcgggatccttctctg
aaacttgctgaatttaaattggagaatattataagtactttaaaaatgtatacagatgac
tcaacattttcttccttctcattaaaaaactgtattttagatgataaaaggcctcatgtc
aagaaagcaactcctcgaatgataggactgactgttggttttgacaaaaaagacatgatg
gatataaagtacaggaaagtcagagatggctgtgtgactgatgcagtctttcaagaaatg
tatatttgtgcaagtgtagaatttctgcagactgttgcaaatgtctttcttgaggcctac
accacaggcactgctgtagaaaccagtgtgcaaacatggactgctaaggaagaagtacct
acgcaggaatcagagaagtgggaaattaatgttattattaaaaatcctgaaattgtgttt
gtggctgacatgacaaaaaatgatgctcctgccttagtcattacaacacaatgtgaaatt
tgctataaaggtaaccttgaaaatagcacaatgactgctgctattaaagatctccaagtg
agagcctgcccgtttcttccagtcaagagaaaaggcaaagtcactactgttttgcagccc
tgtgacttgttttatcaaactactcagacaggtacagatccacaagtgatcgatatgtca
gtaaaatccctgacactaaaggtttcaccagtcattataaatactatgattaccataact
tcagcactgtatacaactaaggaaaccatcccagaagaaacagcttcttctactgcacat
ttatgggaaaagaaggatacaaagactttaaaaatgtggtttcttgaagaatcaaatgaa
actgaaaaaatagctcccacaactgaattggtacccaaaggcgagatgataaaaatgaac
attgattctatttttatagttcttgaggctggaattggtcatagaacagtgcctatgctt
ctggcaaagtcacgtttttcaggggaaggcaaaaactggagttccctaataaatctgcac
tgtcagcttgagctagaagtgcattattataatgaaatgtttggtgtatgggagcctttg
cttgaacccttagaaattgatcagactgaggattttagaccatggaatcttggtatcaag
atgaaaaagaaagccaaaaaggccattgttgagtcagatcctgaagaagaaaactacaaa
gttccagaatataaaacagtcattagtttccattcaaaagaccaattaaacattacatta
tccaaatgtggtcttgtgatgttaaataatttaggcaaggcatttacagaagctgccact
ggatcttcagctgacttcgtaaaggatctagcaccatttataattttaaattcccttgga
cttactatctctgtttcgccaagtgattcttttagtgtactcagcattcctatggcaaaa
tcatatgtattgaaaaatgaagaaagtttaagtatggattatgtccgaaccaaggacaat
gatcatttcaatgcaatgactagcctaagcagcaaactcttcttcattcttcttacacct
gttaaccattctactgctgataagattcctttaacaaaagtgggacgacgtctgtactct
gtaagacacagagagtctggagttgaaagatctattgtttgtcaaattgatacagtggaa
ggaagtaagaaggtcacaattcgctccccagtgcagataagaaatcatttttcagtccca
ctgtctgtttatgaaggggataccttattgggaactgcctcacctgaaaatgaattcaac
ataccattaggatcttaccgatcattcctttttctgaagccagaagatgaggactatcaa
atgtgtgaaggaattgactttgaagagattgtgaaaaatgatggtgcccttctaaagaag
aaatgtagatctaaaaacccttctaagcaatcatttctcattaatattgttccagaaaaa
gataatttaacgtctctatcagtgtattcagaagatggttgggatttaccatacataata
catttgtggccacctatcctgctccgaaatcttcttccttacaaaattgcttattatata
cagggaattgaaaattcagtttttactctaaatgaaggacattcagaccagatttgtact
gtacagttggataaagccaggctacatttaaaattacttgactatctcaatcacaattgg
acaagtgaatatcacgtaaaacctaatcagcaagacattagttttgtcaattttacctgt
gttacagaaatggaaaagactgatttagatattgctgtccatatgacttataatactggt
cagacagttgtggcatttcatagtccttactggatggtcaacaaaactggtcgcatgtta
cagtacaaagcagacggaattcatcgaaagcatccacctaattataaaaagccagttctc
ttttcttttcagccaaatcacttttttaataacaataaggttcaacttatggtaactgat
agtgaattgtctgatcagttttcaattgatactgttggtagtcatggagctgttaaatgt
aaaggcctgaaaatggactatcaagttggtgtcactatagacctgagcagttttaacatt
actagaattgtgacatttacccctttttatatgattaaaaacaaaagcaaataccgttta
tcagtggctgaagaaggaactgataaatggctctctcttgatttggagcagtgtatcccc
ttttggcctgaggatgcttctagtaaacttcttattcaagttgaagggagtgaagatcct
cccaaaaggatatattttaacaagcaagaaaattgtattctattgcgtctggataacgag
cttggaggtattatagcagaagtgaatttggccgagcattctacagttattacattttta
gattatcatgatggagcagctacattcctcttaataaatcacacaaagaatgaacttgtt
caatacaatcaaagttctctcagtgaaatagaagattccctccctcctggaaaagcagtg
ttttatacatgggctgatccggtgggctctagaaggctgaagtggagatgtagaaaaagc
catggtgaagtaacacaaaaggatgatatgatgatgcctatagatttggggaaaaagaca
atttatttagtttcattctttgaaggtttgcaacgcattattttattcactgaagatcca
aaggtatttaaagtaacatatgaaagtgagaaagcagagttagcagagcaagaaattgca
gtggcattacaagatgttggaatttctcttgtcaacaattacacgaagcaagaagtagcc
tatataggcatcacaagttctgatgtggtttgggagacaaagcccaagaagaaggcaaga
tggaagccaatgagtgtaaagcacactgagaagttagagagagaatttaaggaatatact
gaatcttcaccttcagaagataaggttattgagttggacactaacattccggttcgctta
acacctactggtcataacatgaaaattctgcagccgcgtgtaatagctctacgaagaaat
tatcttccagcattaaaagtggaatataacacatctgcacatcaatcatcatttagaatt
caaatctacagaatacagatccaaaatcagatacatggtgctgtgtttccctttgtgttt
taccctgttaaacctccaaagtcggttaccatggattcagcaccaaagccctttacagat
gtcagtattgtcatgagatctgcaggacattcccagatatcacgtattaagtatttcaaa
gtattgattcaagaaatggatctcaggttagatcttgggtttatctatgctttaacagac
cttatgacagaagctgaggtaactgaaaatacagaggttgagctttttcataaagatata
gaagctttcaaagaagaatataaaacagcctcattaatagatcaatcaaaagtcagcctc
tatgaatattttcatatatctcctctcaagttacatttaagtgtttcactgagttcgggt
ggagaagaagctaaagattcaaaacaaaatggaggactgattccagttcattctttaaat
cttttgctgaagagtattggtgccacactgacagatgtacaagatgtagtttttaagctt
gcattttttgaactcaactatcagttccatacaacatccgacctacagtctgaagtcata
agacactattcaaaacaggccataaagcagatgtatgtactcattcttggacttgatgtg
ttgggaaatccatttggcttaattagagaattttctgaaggtgtagaagcattcttttat
gaaccttaccagggagccatccagggtcctgaagagtttgtggagggaatggcactagga
cttaaggcactagttggtggagctgttggtggattggcgggtgctgcctccaaaatcacc
ggtgctatggctaaaggggtagcagctatgactatggatgaagactaccaacagaagaga
agagaagccatgaataagcaaccagctggttttagagaaggcatcactcgtggaggaaaa
ggcttagtttctggatttgttagtggcataacaggaattgttacaaaaccaatcaaagga
gctcaaaaagaaggagcagctggtttctttaaaggtgttgggaaaggtttagtgggagca
gtagcaaggccaactggaggcatcatagacatggctagcagtacatttcagggaataaaa
agagctacagagacttctgaagtggagagtctgcgacctcctcggttcttcaatgaagat
ggagttatcagaccgtacaggttgagggatggtactggaaatcaaatgttacaggtcatg
gaaaatggaagatttgcaaaatacaaatattttacccacgtcatgatcaataagacagat
atgctaatgataaccagatgtggtgtattgtttgtaacaaagggaacatttggacagctc
acgtgtgagtggcagtatagctttgatgagtttaccaaagagccattcattgttcatgag
agaagattgcgcattgaagcaaaggaacgagtgaagtctgtatttcatgccagagagttt
ggaaaaataattaacttcaagaccccagaggatgccaggtggatccttacaaagctagaa
gaagcaagagaaccttctccgagcctctga
DBGET
integrated database retrieval system
