Piliocolobus tephrosceles (Ugandan red Colobus): 111546314
Help
Entry
111546314 CDS
T07491
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh04151
PI3K-Akt signaling pathway
pteh04382
Cornified envelope formation
pteh04510
Focal adhesion
pteh04512
ECM-receptor interaction
pteh04820
Cytoskeleton in muscle cells
pteh04926
Relaxin signaling pathway
pteh04933
AGE-RAGE signaling pathway in diabetic complications
pteh04974
Protein digestion and absorption
pteh05146
Amoebiasis
pteh05165
Human papillomavirus infection
pteh05200
Pathways in cancer
pteh05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
111546314 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111546314 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111546314 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111546314 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
111546314 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
111546314 (COL4A1)
09158 Development and regeneration
04382 Cornified envelope formation
111546314 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
111546314 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
111546314 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
111546314 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
111546314 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
111546314 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pteh04147
]
111546314 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
pteh00536
]
111546314 (COL4A1)
Exosome [BR:
pteh04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111546314 (COL4A1)
Glycosaminoglycan binding proteins [BR:
pteh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111546314 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111546314
NCBI-ProteinID:
XP_023073411
Ensembl:
ENSPTEG00000033914
UniProt:
A0A8C9LX92
LinkDB
All DBs
Position
X:3675249..3827728
Genome browser
AA seq
1669 aa
AA seq
DB search
MGPRLSVWLLLLPAALLLHEEHSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKGDPGEILGHVPGMLLKGERGFPGL
PGNPGPPGLPGLQGPIGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP
GVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGEKGEKGS
PGFPGEPGYPGLVGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEPGP
KGFPGLPGQPGPPGLPVPGQAGAPGFPGERGEKGDRGFPGASLPGPSGRDGLPGPPGSPG
PPGQPGYTNGIVECQPGPPGDQGPPGIPGQPGLIGEIGEKGQKGESCLICDTTGYRGPPG
PQGPPGEIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGLIGQPGAKGEPGEIYFDLRLK
GDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDT
GPPGPPGYGPTGPIGDKGQAGFPGGPGSPGLPGPKGEPGKVVPLPGPPGAEGLPGSPGFP
GPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDVGPPGTPGRPGFNG
LPGNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSVGVPGVPGEHGAIGPPGLQGI
RGEPGPPGLPGSVGSPGVPGIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPG
PKGDKGSQGLPGVTGQSGLPGLPGQQGSPGIPGFPGSKGEMGVMGTPGQPGSPGPVGVPG
LPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIG
PIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPG
TPGEKGVPGIPGPQGSPGLPGEKGAKGAKGQAGPPGIGIPGLPGEKGDQGIAGFPGSPGE
KGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGT
PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSP
GIPGSKGEQGFMGPPGPQGQPGLPGSPGRATEGPKGDRGPQGQPGLPGLPGPMGPPGLPG
IDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGPKG
LPGLQGIKGDQGDQGVPGAKGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLQGPPGPK
GQQGVTGLVGIPGPPGIPGFDGAPGQKGEMGPTGPTGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTIDDPQCPSGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPPCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctcagcgtctggctgctgctgctgcccgccgcccttctgctccacgag
gagcacagccgggccgctgcgaagggtggctgtgctggctctggctgtggcaaatgtgac
tgccatggagtgaagggacagaagggcgagagaggcctcccagggttacaaggtgtcatt
gggtttcctggaatgcaaggacctgaggggccgcagggaccaccaggacaaaagggtgat
actggagaaccaggactacctggaacaaaagggacaagaggacccccgggagcgtctggc
taccctggaaacccaggacttcccggtattcctggccaagacggcccaccaggcccccca
ggtattccaggatgcaatggcacaaagggggagagagggccgctcgggcctcctggcttg
cctggtttcgctggaaatcccggaccaccagggttaccaggaatgaagggtgatccaggt
gagatccttggccatgtgcccgggatgctgttgaaaggtgaaagaggatttcccggactg
ccagggaatccaggcccaccaggactgccagggcttcaaggtcctattgggcctccagga
tttaccggaccaccgggtcccccaggtcctcccggccctccaggtgaaaagggacaaatg
ggcttaagttttcaaggacccaaaggtgacaagggtgaccaaggggtcagtgggcctccg
ggagtaccaggacaagctcaagttcaagaaaaaggagattttgccaccaagggagaaaag
ggccaaaaaggtgaacctggatttcagggaatgccaggggtcggagagaaaggtgaaccc
ggaaaaccgggacccagaggaaaacccggaaaagatggtgaaaaaggggaaaaagggagt
cccggttttcctggtgaacccgggtacccaggactcgtaggccgccagggcccgcaggga
gaaaagggtgaagcaggtcctcctggcccacctggaattgttataggcacaggacctttg
ggagaaaaaggagagcggggctaccctggaactccagggccaagaggagagccaggccca
aaaggtttcccaggactaccaggccaacccggacctccaggcctccctgtacctgggcag
gctggtgcccctggcttccctggtgaaagaggagaaaaaggtgaccgaggatttccgggt
gcatctctgccaggaccaagtggaagagacgggctcccaggtcctcctggttcccccggg
ccccctgggcagcctggctacacaaatggaattgtggaatgtcagcccggacctccaggt
gaccagggtcctcctggaattccagggcagcctggattgataggcgaaattggagagaaa
ggtcaaaaaggagagagttgcctcatctgtgatacaaccggatatcgggggcctcccggg
ccacagggacccccaggagaaataggtttcccaggacagccaggggccaagggcgacaga
ggtttgcctggcagagatggtgttgcaggagtgcctgggcctcaaggtacaccagggctg
ataggccagccaggagccaagggggagcctggtgagatttatttcgacctgcggctcaaa
ggtgacaaaggagacccaggctttccaggacagcccggcatgccagggagagcgggttct
cctggaagagatggccatccgggtcttcctggccccaagggctcgccgggttctgtagga
ttgaaaggagagcgtggcccccctggaggagttggattcccaggcagtcgtggtgacacc
ggcccccctgggcctccaggatatggtcctactggtcccattggtgacaaaggacaagca
ggctttcctggaggccctgggtccccaggcctgccaggtccaaagggtgaaccaggaaaa
gttgttcctttaccaggcccccctggagcagaaggactgccagggtccccaggcttccca
ggtccccaaggagaccgaggctttcctggaaccccaggaaggccaggcctgccaggagag
aagggtgctgtgggccagccgggaattggatttccagggccccccggccccaaaggtgtt
gacggcttacctggagacgtggggcctccagggactccaggtcgcccgggatttaatggc
ttacctgggaacccaggtgtgcagggccagaagggagagcctggagttggtctaccggga
ctcaaaggtttgccaggtcttcccggcattcctggcacacccggcgagaagggaagcgtt
ggggtaccaggcgttcctggagagcacggagcgatcggaccccctgggcttcaggggatc
agaggtgaaccggggcctcctggattgccaggctccgtggggtctccaggagttccagga
attggcccccctggagctaggggccccccaggaggacagggaccaccggggttgtcgggc
cctcctggaataaaaggagagaagggtttccccggattccccggactggacatgccaggc
cctaaaggagataaaggatctcaaggacttcctggcgtaacaggacagtcagggctccct
ggccttcctggacagcaggggtctcctgggattcctgggtttccaggctccaagggagaa
atgggcgtcatggggacccccgggcagccgggctcgccaggaccagtgggtgttccggga
ttaccgggtgaaaaaggggaccatggctttccgggctcctcaggacccaggggagaccct
ggcctgaaaggtgataagggggatgtcggtctccctggcaagcctggctccatggataag
gtggacatgggcagcatgaagggccagaagggagaccaaggagagaaaggacaaattgga
ccaattggtgagaaaggatcccgaggagaccctgggaccccaggagtgcctggaaaggat
gggcaggcaggacagcctgggcagccaggaccgaaaggtgatccaggtataagtggaacc
ccaggtgctccaggacttccgggaccaaaaggatctgttggtggaatgggcttgccagga
acacctggagagaaaggtgtgcctggcatccctggcccacaaggttcacctggcttacct
ggagaaaaaggtgcaaaaggagcgaaagggcaggcaggcccacctggcataggcatccca
gggctgcctggtgaaaagggagatcaagggatagcgggtttcccaggaagccctggagag
aagggagaaaaaggaagcattgggatcccaggaatgccagggtccccaggccttaaaggg
tctcctgggagtgttggctatccagggagccctgggctgcctggagaaaaaggtgacaaa
ggcctcccaggattggatggcatccctggtgtcaaaggagaagcaggtcttcctgggacg
cctggccccacaggcccagctggccagaaaggggagccaggcagtgacggaatcccgggg
tcagcaggagagaagggtgaaccaggtctaccaggaagaggattcccagggtttccaggg
gccaaaggagacaaaggttcaaagggtgaggtgggttttccaggattagccgggagccca
ggaattcctggatccaaaggagagcaaggattcatgggtcctccagggccccagggacag
ccagggttaccaggatccccaggccgtgccacggaggggcccaaaggagaccgtggacct
cagggccagcctggcttgccaggacttccgggacccatggggcctccggggcttcctggg
attgatggagttaaaggtgacaaaggaaatccaggctggccaggagcacccggtgtccca
gggcccaagggagaccctggattccagggcatgcctggtattggtggctctccaggaatc
acaggctctaagggtgatatggggcctcccggagttccaggatttcaaggtccaaaaggt
cttcctggcctccagggaattaaaggtgatcaaggcgatcaaggtgtcccgggagctaaa
ggtctcccgggtcctcctggccccccaggtccttacgacatcatcaaaggggagcccggg
ctccctggtcctgagggccccccagggctgaaagggcttcagggacctccaggccccaaa
ggccagcaaggtgttacaggattggtgggtatacctggacctccaggtattcctgggttc
gacggtgcccctggccagaaaggagagatgggacctaccgggcctactggtccaagagga
tttccaggtccaccaggccccgatgggttgccagggtccatggggcccccaggcacccca
tctgttgatcacggcttcctggtgaccaggcacagtcaaacaatagacgacccacagtgt
ccttctgggaccaaaattctttaccatgggtactctttgctctacgtgcaaggcaacgaa
cgggcccatggccaggacttgggcacggccggcagctgcctgcgcaagttcagcacgatg
cccttcctgttctgcaatatcaacaacgtgtgcaactttgcatcacgaaacgactactcg
tactggctgtccacccccgagcccatgcccatgtccatggcacccatcacgggggacaac
ataagaccatttattagtaggtgtgctgtgtgtgaggcgcccgccatggtgatggccgtg
cacagtcagaccattcagatcccaccgtgccccagcgggtggtcctcgctgtggatcggc
tactcttttgtgatgcacaccagcgctggtgcagaaggctctggccaagccctggcatcc
cctggctcctgtctggaggagtttagaagtgcgccattcatcgagtgtcacggccgtggg
acctgtaattactacgcaaatgcttacagcttttggctcgccaccatagagaggagcgag
atgttcaagaagcccacgccgtccaccttgaaggcaggggagctgcgcacgcacgtcagc
cgctgccaagtctgtatgagaagaacataa
DBGET
integrated database retrieval system
