Piliocolobus tephrosceles (Ugandan red Colobus): 111550282
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Entry
111550282 CDS
T07491
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh04120
Ubiquitin mediated proteolysis
pteh04137
Mitophagy - animal
pteh04141
Protein processing in endoplasmic reticulum
pteh05012
Parkinson disease
pteh05014
Amyotrophic lateral sclerosis
pteh05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111550282 (PRKN)
04120 Ubiquitin mediated proteolysis
111550282 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111550282 (PRKN)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
111550282 (PRKN)
05014 Amyotrophic lateral sclerosis
111550282 (PRKN)
05022 Pathways of neurodegeneration - multiple diseases
111550282 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pteh04131
]
111550282 (PRKN)
04121 Ubiquitin system [BR:
pteh04121
]
111550282 (PRKN)
03029 Mitochondrial biogenesis [BR:
pteh03029
]
111550282 (PRKN)
Enzymes [BR:
pteh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
111550282 (PRKN)
Membrane trafficking [BR:
pteh04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
111550282 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
111550282 (PRKN)
Xenophagy
Other xenophagy associated proteins
111550282 (PRKN)
Ubiquitin system [BR:
pteh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
111550282 (PRKN)
Mitochondrial biogenesis [BR:
pteh03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
111550282 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR_2
IBR_1
IBR
Rad60-SLD
Rcat_RNF216
Rad60-SLD_2
Dsc3_N
Crinkler
Motif
Other DBs
NCBI-GeneID:
111550282
NCBI-ProteinID:
XP_023079379
Ensembl:
ENSPTEG00000026300
UniProt:
A0A8C9HXQ0
LinkDB
All DBs
Position
5:complement(12654058..14032234)
Genome browser
AA seq
465 aa
AA seq
DB search
MIVFVRFNSSHGFPVEVDSDTSIFQLKEVVAKRQGVPTDQLRVIFAGKELRNDWTVQNCD
LDQQSIVHIVQRPWRKGQEMNATGGDNPRNTAGGCEREPQSLTRVDLSSSVLPGDSVGLA
VILHTDSRNDSPPAGSPADRPIYNSFYVYCKGPCQRVQPGKLRVQCSTCRQATLTLTQGP
SCWDDVLIPNRMNGECQSPNCPGTTAEFFFKCGAHPTSDKETSVALHLIATNSRNITCIT
CTDVRSPVLVFQCNSRHVICLDCFHLYCVTRLNDRQFVHDPQLGYSLPCVAGCPNSLIKE
LHHFRILGEEQYNRYQQYGAEECVLQMGGVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGC
GFAFCRECKEAYHEGECSALFEASGTTTQAYRVDERAAEQARWEEASKETIKKTTKPCPR
CHVPVEKNGGCMHMKCPQPHCRLEWCWNCGCEWNRVCMGDHWFDV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgtttgtgaggttcaactccagccatggtttcccagtggaggtcgattctgac
accagcatcttccagctcaaggaggtggttgctaagcgacagggggttccgactgaccag
ttgcgtgtgattttcgcagggaaggagctgaggaatgactggactgtgcagaactgtgac
ctggatcagcagagcatcgttcacattgttcagagaccatggagaaaaggtcaagaaatg
aatgcaactggaggcgacaaccccagaaacacggcgggaggctgtgagcgggagccccag
agcttgactcgagtggacctcagcagctcagtcctcccaggagactctgtggggctggct
gtcattctgcacactgacagcaggaatgactcaccaccagctggtagtccagcagataga
ccaatctacaacagcttttatgtgtattgcaaaggcccctgtcaaagagtgcagccagga
aaactcagggtacagtgcagcacctgcagacaagcaacgctcaccttgacccagggtcca
tcttgctgggatgatgttttaattccaaaccggatgaatggtgaatgccagtccccaaac
tgccctgggactactgcagaatttttctttaaatgtggagcacaccccacctctgacaag
gaaacatcagtagctttgcacctgatcgcaacaaatagtcggaacatcacttgcattacg
tgtaccgacgtcaggagccccgtcttggttttccagtgcaactcccgccacgtgatttgc
ttagactgtttccacttatactgtgtgacaagactcaatgatcggcagtttgttcatgac
cctcaacttggctactccctgccttgtgtggctggctgtcccaactccttgattaaagag
ctccatcacttcaggattctgggagaagagcagtacaaccgataccagcagtatggtgca
gaggagtgtgtcctgcagatgggtggcgtgttatgcccccgccctggctgtggagcgggg
ctgctgccggagcctgaccagaggaaagtcacctgcgaaggcggcaacggcctgggctgt
gggtttgccttctgccgggagtgtaaagaagcgtaccatgaaggggagtgcagtgcccta
tttgaagcctcaggaacaactactcaggcctacagagttgatgaaagagccgcagagcag
gctcgttgggaagaagcctccaaagaaaccatcaagaaaaccaccaagccctgtccccgc
tgccatgtaccagtggaaaaaaatggaggctgcatgcacatgaagtgtccgcagccccac
tgcaggctcgagtggtgctggaactgtggctgcgagtggaaccgcgtctgcatgggggac
cactggttcgacgtgtag
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