Piliocolobus tephrosceles (Ugandan red Colobus): 111550866
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Entry
111550866 CDS
T07491
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03030
DNA replication
pteh03410
Base excision repair
pteh03420
Nucleotide excision repair
pteh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111550866 (RFC1)
03410 Base excision repair
111550866 (RFC1)
03420 Nucleotide excision repair
111550866 (RFC1)
03430 Mismatch repair
111550866 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pteh03032
]
111550866 (RFC1)
03400 DNA repair and recombination proteins [BR:
pteh03400
]
111550866 (RFC1)
DNA replication proteins [BR:
pteh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111550866 (RFC1)
DNA repair and recombination proteins [BR:
pteh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111550866 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
RuvB_N
Rad17
AAA_5
AAA_14
BRCT_2
AAA_16
AAA_17
AAA_33
Zeta_toxin
nSTAND3
AAA_30
RNA_helicase
Nexin_C
NTPase_1
AAA_7
AAA_18
NPHP3_N
AAA_19
AAA_28
Motif
Other DBs
NCBI-GeneID:
111550866
NCBI-ProteinID:
XP_023080302
Ensembl:
ENSPTEG00000023298
LinkDB
All DBs
Position
3:146934324..147017745
Genome browser
AA seq
1148 aa
AA seq
DB search
MDIRKFFGVIPSGKKLVTETVKKNEKTKSDEETLKAKKGIKEIKVSSSRKEDDFKQKQPS
KKKRIIYDSDSESEETLQVKNAKKQPEKSPVSSKPGKISRQDPVTYISETDEEDDFMCKK
AASKSKENGRSTNSHLGTSNIKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSNKK
MVASKRKELSQNTHESGLNDEAIAKQLQLDEDVELERQLHEDEEFARTLAMLDEEPKTKK
ARKDTEEGETFSSVQANLSKAEKRKYPHKVKTEQFSNERKSYSPRKQTKFESSKEPQQHS
KSSADKIGEVSSPKASSKLAIMKRKEESVYKEIEPMASKRKENAIELKGETKTPKKTKSS
PTKKESISPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLES
IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIR
TMPGKKSKYEIAVETEMKKESKLERTPQKKVQGKRKISPSKKESESKKSKPTSKRDSLAK
TIKKETDVFWRGLDFKEQVAEETSGDSKARNLAEDSSENKVENLLWVDKYKPASLKTIIG
QQGDQSCANKLLRWLRNWHKSSSEDKKHAAKFGKFSGKDDGSSFKAALLSGPPGVGKTTT
ASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMD
EVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQI
KGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSLRA
KKDIKMGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGD
MKKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRGFMTQFPTFP
SWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSHLRDALVQPLTSQGVDGVQD
VVALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAI
KASRHSTSPSLDSEYNEELNEDDSQSDEKDQDAIETDAMIKKKTKPSKPSKPEKDKEPRK
GKGKNSKK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggacattcggaaattctttggagtaataccaagtggaaagaaacttgtaactgaaaca
gtaaagaagaatgagaaaacaaagtctgatgaagaaactttaaaagcaaagaaaggaata
aaggaaatcaaggtaagtagctcccgtaaagaggatgacttcaaacaaaagcaaccaagc
aagaaaaagaggatcatctatgattcagattcagagtcagaggagacattgcaggtaaaa
aatgccaaaaagcaaccagaaaaatcgccagtatcttctaaacctggtaaaatttcacgg
caggatcctgttacatacatttcagaaacagatgaagaagatgactttatgtgtaagaag
gcggcctctaaatcaaaagagaatggaagatctacaaatagtcatcttggaacatcaaac
ataaaaaagaatgaagaaaacactaagaccaagaacaagcctttatcaccaataaaactt
acacccacatcagtgcttgattattttggaactggaagtgtccaaagatctaataagaag
atggtggcaagcaaaagaaaagagctttcacaaaatacacatgagtctggattaaatgat
gaagccatcgccaagcaattacagcttgatgaagatgtggagctggagaggcagttgcat
gaagatgaagaatttgccagaacattagccatgttggatgaagaacccaagaccaaaaag
gctcgaaaggacacagaagagggagaaacgttttcatctgtccaagccaatttaagtaaa
gcagaaaaacgtaaatatcctcataaagtaaaaacagaacaattttcaaatgaaagaaag
agctacagtcctaggaagcaaactaaatttgaaagttcaaaagaacctcagcaacattcc
aagtcatcagctgacaaaataggagaagtctcttctcccaaggccagttctaagctggca
attatgaaaagaaaagaagagagcgtttataaagaaatagagcccatggcctcaaaaaga
aaagaaaatgccattgaattgaaaggagagacaaaaactcctaagaaaaccaaaagttct
ccaactaaaaaagagtctataagtcctgaagattctgaaaagaaacgcactaattatcaa
gcttatcgaagctacttaaatcgagaaggtcccaaggctctgggctccaaagaaatacca
aagggagctgaaaattgcttggaaggccttatatttgtaatcacaggcgtgctggagtct
attgaacgagatgaggccaagtctctaattgaacgttatgggggaaaagtaacaggaaat
gtcagcaagaaaacaaattaccttgtcatgggtcgtgatagtggacagtccaagagtgat
aaggctgcagccttggggacaaaaattattgatgaagatggcctgttgaatctgattcga
actatgccaggcaagaaatccaagtacgaaatagcagttgaaactgagatgaagaaagag
tccaaactggagagaacaccccaaaaaaaggtccaaggcaaaagaaaaattagtccatct
aaaaaggaatcggaatctaaaaagagcaagccgacttcgaaaagggacagtttggcaaag
acaataaaaaaggaaacagatgtgttttggagaggcctggatttcaaggagcaggtggcc
gaggaaacaagtggtgacagcaaggctaggaatttggctgaagacagcagtgaaaacaaa
gtggaaaatttgctctgggtggataaatataagccagcctctctcaagaccataattgga
cagcaaggtgaccagagctgtgccaacaaactcctacgctggctccgaaactggcacaag
agttcttctgaagataaaaaacacgcagcaaagtttggtaaattttccggcaaagatgat
ggctctagttttaaagcagcgttgctgtcaggccctcctggtgttggcaaaaccaccaca
gcttccctggtgtgtcaggaattgggatacagctacgtggaactgaatgcaagtgacacc
cggagtaagagcagtttgaaggcgattgttgctgagtcactgaacaataccagcatcaaa
ggcttttattcaaatggagcagcctcttcagtaagcacgaaacatgctctcatcatggat
gaagtagatggcatggcaggcaatgaggataggggaggaattcaggaattaattggcctg
ataaaacatactaaaattcccattatttgtatgtgcaatgatagaaatcatcccaagatt
cgctctctggttcattattgttttgatcttcgttttcaaagacctcgggttgaacagatt
aagggtgctatgatgtctattgcatttaaagaaggtttaaagattccccctccagcaatg
aatgaaataattttgggagccaatcaagatatcagacaggttttacataatctgagtatg
tggtgtgcacgaagtaaagcattaacctatgaccaggccaaagctgattctctcagagcc
aaaaaggatatcaaaatgggcccatttgatgttgcccggaaagtgtttgcagctggagag
gagactgctcacatgtcacttatggacaagtcagatctcttttttcatgattattcaata
gcacccctctttgtccaggaaaattacatacatgtgaagcctgtagcagcagggggtgac
atgaaaaagcacttgatgcttttaagcagagcagcagacagcatatgtgatggtgactta
gtggacagccagatccggagtaagcaaaactggagtcttctgcctacgcaggccatttat
gccagtgttcttcctggagagttgatgagagggttcatgacccagtttcccaccttcccg
agctggctggggaagcactcgtctacaggcaaacacgatcgtattgttcaggacctggcc
ttgcatatgagtctcagaacttactccagcaaaaggactgtaaacatggattatctgtca
catctaagggatgcacttgtacagcccttgacctcacaaggagtcgacggggtacaggat
gttgttgcacttatggacacatattatttgatgaaagaagactttgagaatatcatggaa
attagcagctggggtggcaaacctagtcccttttcaaagctggatcccaaggtgaaagca
gccttcacaagagcttacaataaggaagcccaccttactccatattcacttcaagctata
aaggcatctagacacagcacaagcccatccctggattcggaatacaatgaagagttaaat
gaagatgactctcaatctgatgagaaagaccaagatgctatagaaactgatgccatgatc
aagaaaaagacaaaaccttcaaagccttcaaaaccagaaaaagataaggagcccagaaaa
ggaaaaggaaaaaattcgaagaaatga
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integrated database retrieval system
