Piliocolobus tephrosceles (Ugandan red Colobus): 111553979
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Entry
111553979 CDS
T07491
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111553979 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pteh03021
]
111553979 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
pteh03019
]
111553979 (SUPT5H)
Transcription machinery [BR:
pteh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111553979 (SUPT5H)
RNA polymerase I system
111553979 (SUPT5H)
Messenger RNA biogenesis [BR:
pteh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
111553979 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW5_SPT5
KOW2_Spt5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
111553979
NCBI-ProteinID:
XP_023084955
Ensembl:
ENSPTEG00000037607
UniProt:
A0A8C9IRG6
LinkDB
All DBs
Position
21:complement(18017223..18052648)
Genome browser
AA seq
1087 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSAAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggacagcaacttttccgaggaggaggacagcgagcgcagcagtgac
ggcgaggaggccgaggtagaggaagaacggcggagtgcagcgggcagtgagaaggaagaa
gagcctgaggaagaagaagaggaggaagaggaggaggaatatgatgaggaagaggaggaa
gaagatgatgaccggccccccaagaaaccccgccatggaggcttcattctggacgaggct
gatgtcgacgatgagtatgaggacgaggaccagtgggaggatggagcagaggacatccta
gagaaagaagagattgaagcctccaatattgataatgttgtcctggatgaagatcgttct
ggggctcgccgcctgcaaaacctctggagggaccagcgagaagaagaactgggcgagtat
tacatgaagaaatatgccaagtcatctgtgggagagacggtgtacggaggatctgatgag
ctctcagacgacatcacccagcagcagctactcccaggagtcaaggatcccaatctgtgg
actgtcaaatgtaagatcggggaggaacgggccacggccatttccttgatgcgcaaattc
attgcctaccagttcacagacacgcccctgcagatcaagtcagtagtggcaccagagcac
gtgaagggctacatctatgtggaggcctacaagcagacccacgtgaagcaggccatcgag
ggggtgggcaacctgcgtcttggctactggaaccagcagatggtgcccatcaaggagatg
acagacgtgctcaaagtggtgaaggaggtggccaacctgaaaccaaagtcctgggtccgc
ctcaagcggggcatctacaaggatgacattgctcaggtggactatgtggagcccagccag
aacaccatctccctgaagatgatcccgcgcatcgactacgatcgcatcaaggcccgcatg
agcttgaaagactggtttgccaaaaggaagaagtttaagcggcctccacagaggctgttt
gatgctgagaagatcaggtccctggggggcgatgttgcctctgatggtgacttcctcatc
tttgaggggaaccgttacagccggaagggctttctgttcaagagcttcgccatgtctgct
gtgatcacggagggtgtgaagcccacactctctgagctagagaagtttgaggaccagccg
gagggcatcgacctggaggtggtgactgagagcacagggaaggagcgggagcacaacttc
cagcctggggacaatgtggaggtctgtgagggcgagctcatcaacctgcagggcaagatc
ctcagcgtggatggcaacaagatcaccatcatgcccaagcatgaggacctcaaggacatg
ttggagttcccagcccaggaacttcggaaatacttcaagatgggggaccacgtgaaggtg
attgccggccgattcgagggcgacacaggcctcattgtgcgggtagaggagaattttgtt
atcctgttctctgacctcaccatgcatgagctgaaggtgctcccccgggacctgcagctc
tgctcagagacagcatcaggtgtggatgttgggggccagcatgaatggggcgagctggtg
cagctggatccccagactgtgggtgtcatcgtgcgactagaacgggagaccttccaggtg
ctgaacatgtacgggaaggtggtgactgtcagacatcaggctgtgactcgtaagaaagac
aaccgctttgctgtggccttggactcagagcagaacaacatccatgtgaaagacatcgtt
aaggtcattgacggcccccactcaggccgagagggggagattcgccatctcttccgaagc
ttcgccttcctacattgcaagaaactggtggagaacgggggcatgtttgtctgcaagacc
cgccacctggtgctggctgggggctcgaagccccgtgatgtgaccaacttcaccgtgggt
ggctttgcacctatgagtccccggatcagcagccccatgcaccccagtgctggaggtcag
cgtggcggctttggtagtccaggtggcggcagtggtggcatgagcaggggccggggccgg
agggacaacgaactcatcggccagaccgtgcgcatctcccaggggccctacaaaggctac
atcggtgtggtgaaggatgccacagagtccacggcccgtgtggagctgcactccacctgc
cagaccatctctgtggaccgtcagcggcttaccacggtgggctcacggcgcccaggtggc
atgacctcgacctatgggcggacgcccatgtatggctcccagacgcccatgtatggctct
ggctcccgaacacccatgtatggctcacagacgcccctccaggatggcagccgcacccca
cactatggctcgcagacgcccctgcatgatggcagccgcactcctgcccagagtggggcc
tgggaccccaacaaccccaacacgccatcacgggctgaggaagaatatgagtatgccttc
gacgatgaacccaccccgtccccgcaggcctatgggggaacccctaatccccaaacacct
ggctacccagacccctcatccccacaggtcaacccacagtacaacccgcagacgccaggg
acgccggccatgtacaacacagaccagttctctccctatgctgccccctccccacaaggt
tcctaccagcccagccccagtccccagagctaccaccaggtggcgccaagcccagcaggc
taccagaatacccactccccggccagctaccaccctacaccctcgcccatggcctatcag
gctagccccagcccgagccctgttggctacagtcctatgacacctggagctccctcccct
ggtggctacaacccacacacgccaggctcaggcatcgagcagaactccagcgactgggta
accactgacattcaggtgaaggtgcgggacacctacctggatacacaggtggtgggacag
acaggtgtcatccgcagtgtcacggggggcatgtgctccgtgtacctgaaggacagtgag
aaggtcgtcagcatttccagtgagcacctggagcccatcacccccaccaagaacaacaag
gtgaaagtgatcctgggcgaggatcgggaagccacgggcgtcctgctgagcattgatggt
gaggatggcattgtccgtatggaccttgatgagcagctcaagatcctcaacctccgcttc
ctggggaagctcctggaagcctga
DBGET
integrated database retrieval system
