Piliocolobus tephrosceles (Ugandan red Colobus): 111554360
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Entry
111554360 CDS
T07491
Symbol
SLC1A6
Name
(RefSeq) excitatory amino acid transporter 4 isoform X1
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh04082
Neuroactive ligand signaling
pteh04721
Synaptic vesicle cycle
pteh04724
Glutamatergic synapse
pteh05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
111554360 (SLC1A6)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
111554360 (SLC1A6)
04721 Synaptic vesicle cycle
111554360 (SLC1A6)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
111554360 (SLC1A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pteh02000
]
111554360 (SLC1A6)
Transporters [BR:
pteh02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
111554360 (SLC1A6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
111554360
NCBI-ProteinID:
XP_023085632
Ensembl:
ENSPTEG00000035863
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Position
21:38186183..38253598
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AA seq
564 aa
AA seq
DB search
MSSHGNSLFLRESGQRLGRVGWLQRLQESLQQRALRTRLRLQTMTREHVLRFLRRNAFIL
LTVSAVVIGVSLAFALRPYQLTYRQIKYFSFPGELLMRMLQMLVLPLIVSSLVTGMASLD
NKATGRMGMRAAVYYMVTTIIAVFIGILMVTIIHPGKGSKEGLHREGRIETIPTADAFMD
LIRNMFPPNLVEACFKQFKTQYSTRVVTRTIVRTENGSELGASMPPPFSVDNGTSLLENV
TRALGTLQEVLSFEETVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLN
EAIMRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLLLHAGGVLPL
IYFLITHRNPFPFIGGMLQALITAMGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGA
TVNMDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASVGAAGIPQAGLVTMVIVL
TSVGLPTEDITLIIAVDWFLDRLRTMTNVLGDSIGAAVIEHLSQRELELQEAELTLPSLG
KPYKSLMAQEKGASRGRGGNESAM
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccatggcaacagcctgttcctgcgggagagcggccagcggctgggccgggtg
ggctggctgcagcggctgcaggaaagcctgcagcagcgagcactgcgcacccgcctgcgc
ctgcagaccatgactcgcgagcacgtgctgcgcttcctgcgccgaaacgccttcatcctg
ctgacagtcagcgccgtggtcataggggtcagcctggcctttgccctgcggccatatcag
ctcacctaccgccagatcaagtacttctcttttcctggagagcttctcatgaggatgctg
cagatgctggtgttacctctcattgtctccagcctggtcacaggtatggcatccctggac
aacaaggccacggggcggatggggatgcgggcagctgtgtactacatggtgaccaccatc
atcgcggtcttcatcggcatcctcatggtcaccatcatccatcccgggaagggctccaag
gaggggctgcaccgggagggccggatcgagaccatccccacagctgatgccttcatggat
ctgatcagaaatatgtttccaccaaaccttgtggaggcctgcttcaaacagttcaagacg
cagtacagcacgagggtggtaaccaggaccatcgtgaggacagagaacgggtctgagctg
ggtgcctccatgcctcctccattctcagtggataacggaaccagcctcctggaaaatgtc
actcgggccttgggcaccctgcaggaggtgctgagctttgaggagactgtacccgtgcct
ggctccgccaatggcatcaacgccctgggcctcgtggtcttctctgtggcctttgggctg
gtcattggtggcatgaaacacaagggccgagtcctcagggacttcttcgatagcctcaat
gaggctattatgaggctggtgggcatcattatctggtatgcacctgtgggcatcctgttc
ctgattgctgggaagattctggagatggaagacatggccgtcctggggggtcagctgggc
atgtacaccctgaccgtcatcgtgggcctgcttctccatgctggcggcgtccttcccctc
atctacttcctcatcactcaccggaaccccttccccttcattgggggcatgctacaagcc
ctcatcactgccatgggcacgtcttccagctcagcaacgctgcccatcactttccgctgc
ctggaggagggcctgggtgtggaccgccgcatcaccaggttcgtcctgcccgtgggcgcc
acggtcaacatggacggcactgccctctacgaggccctggctgccatcttcattgctcaa
gttaacaactacgagctcaacctgggtcagatcacaaccatcagcatcacagccacagcg
gccagtgttggggctgctggcatcccccaggcgggtctggtgaccatggtcattgtgctc
acatcggtcggcttgcccacggaggacatcacgctcatcatcgccgtggactggttcctt
gaccggcttcgcacaatgaccaacgtactgggggactcgattggagcagccgtcatcgag
cacttgtctcagcgggagctggagctgcaggaagctgagctcaccctccccagcctgggg
aaaccctacaagtccctcatggcacaggagaagggggcatcccggggacggggaggcaat
gaaagtgctatgtga
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