Piliocolobus tephrosceles (Ugandan red Colobus): 111555521
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Entry
111555521 CDS
T07491
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42 isoform X1
KO
K12589
exosome complex component RRP42
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111555521 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pteh03019
]
111555521 (EXOSC7)
Messenger RNA biogenesis [BR:
pteh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111555521 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
111555521 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
111555521
NCBI-ProteinID:
XP_023087471
Ensembl:
ENSPTEG00000010951
UniProt:
A0A8C9GRZ4
LinkDB
All DBs
Position
2:complement(91634583..91669483)
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AA seq
291 aa
AA seq
DB search
MASVALSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNNKSSVD
LKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTSIPRVRVLEDEEGSKDI
ELSDDPYDCIRLSVENVPCIVTLCKIGYRHVVDATLQEEACSLASLLVSVTSKGVVTCMR
KVGKGSLDPESIFEMMETGKRVGKVLHASLQSVLHKEESLGPKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtggcgctgagcgaggcggagaaggtgtacatcgtgcacggcgtccaggaa
gacctccgcgtggatggccgtggctgtgaggactaccgatgtgttgaagtggaaaccgat
gtggtgtccaacaccagtgggtctgccagggtcaagctgggtcacacagacatcttggtg
ggcgtgaaagcagaaatggggacgccgaagctggagaaaccaaatgaaggttacttggag
ttctttgttgactgttcagccaatgctacccctgaatttgaaggtagaggaggtgatgac
cttggcaccgagatcgctaacaccctctatcggatatttaacaataaaagcagtgtcgac
ttgaagaccctctgcattagtcctcgggagcactgctgggttctctatgtggatgtgcta
ctgctggaatgtggtgggaatttgtttgatgccatttccattgctgtaaaggctgctctc
ttcaatacaagcataccaagggttcgagttctggaggatgaagaggggtcgaaggacatt
gaattgtctgatgacccttatgactgcatacgactaagtgtggagaatgtcccctgcatt
gtcactctgtgcaagattggctatcggcatgtggtggatgctactcttcaggaggaggcc
tgctcactggccagcttgctggtgtcggtgaccagcaagggagttgtgacgtgcatgagg
aaagtggggaagggcagcctggacccagagagcatcttcgagatgatggagactggcaag
cgtgtgggcaaagtgctgcatgcctctttgcagagtgttttgcacaaggaagaaagcctg
ggacccaagagacagaaagttggattcctgggatga
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