Piliocolobus tephrosceles (Ugandan red Colobus): 111555524
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Entry
111555524 CDS
T07491
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha isoform X1
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pteh04040
]
111555524 (SCN11A)
Ion channels [BR:
pteh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
111555524 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
111555524
NCBI-ProteinID:
XP_023087475
Ensembl:
ENSPTEG00000019063
LinkDB
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Position
2:97551433..97777573
Genome browser
AA seq
1790 aa
AA seq
DB search
MDDRCYPVIFPDERNFRPFTSDSLAAIEKRIAIQKEKDKSKDQTGEVPHPRPQLDLKASR
KLPNLYGDIPRELIGKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFIFGPFNSIRS
LAIRVSVHSLFSMFIIGTVIINCVFMATGPAKNSNSNNTDIAECVFTGIYIFEALIKIVA
RGFILDEFSFLRDPWNWLDSIVIGIAIVSCIPGITIKLLSLRTFRVFRALKAISVVSRLK
VIVGALLRSVKKLVNVIILTFFCLSIFALVGQQLFMGSLNLKCISRDCKNISNLEAYDHC
FEKKENSNEFKMCGIWMSNSTCSTQYECNHTKINPDYNYTNFDNFGWSFLAMFRLMTQDS
WEKLYQQTLRTAGLYSVFFFIVVIFLGSFYLINLTLAVVTMAYEEQNKNVAAEIEAKEKM
FQEAQQLLKEEKEALVAMGIDRSSLTSLETSYFTPQKRKLFGIKKRKSFFLRESGKGQPP
GSDSDEDSQKKPQLLEQTKRLSQNLSLDHFDEHRDPLQRQRALSAVSILTITMKEQEKSQ
EPCLPCGENLASKYLVWNCCPPWLCIKKVLRTVMTDPFTELAITICIIINTVFLAMEHHK
MEPSFDKMLTTGNLVFTGIFIAEMCLKIIALDPYHYFRRGWNIFDSIVALLSFADVINSK
SQKRSWPFLRSFRVLRVFKLAKSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGM
QLFGHSFNSQKSLKLCNPTGPTVSCLRHWHMGDFWHSFLVVFRILCGEWIENMWECMQEE
NASSSLCVIVFISITVIGKLVVLNLFIALLLNSFSNEERNGNLEGEARKTKVQLALDRFR
RAFCFVRHTLEHFCHKWCRKQKLPKQKEVTGGCAAQSKDIIPLVTEMKRGSETQEELGIL
TSVPKTLGIRHDWTWLAPLAEEEDDAEFSGEDNAQPITQPEAEQQAYELHQENKKPTSQG
VQSVEIDMFPEDEPHLTIQDPRKKSDVTSILSECSTIDLQDGFGLLPEMVPKKQPQRCLP
KGFGCCFSCCSMDKRKPHWVIWWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHL
ESQPKIQDLLNCTDVIFTYIFILEMVLKWVAFGFGKYFTSAWCCLDFIIVIVSVTTLINS
KELKSFRTLRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVHFF
SGKFWKCINGTDSVINSTIIANKSQCENGNFSWINQKVNFDNVGNAYLALLQVATFKGWM
DIIYAAVDSTGKEQQPEFENNSLGYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKISG
QDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLVFDIVTSQIFDIIIISLIILNM
ISMMAESYDQSKAVKSTLDHLNWVFVVIFTLECLIKIFALRQYYFTNGWNLFDSVVVLIS
IVSTMISTLESQEYIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNI
GLLLFLIMFIYAILGMNWFSKVNPESGIDDIFNFKTFAGSMLCLFQISTSAGWDSLLSPM
LRSKEPCNPSENCHLPGIATSYFVSYVIISFLIVVNMYIAVILENFNTATEESEDPLGED
DFDIFYEVWEKFDPEATQFIEYSALSDFADALPEPLRVAKPNKYQFLVMDLPMVSGDRLH
CMDVLFAFTARVLGGSDGLDSMKAMMEEKFMETNPLKKLYEPIVTTTKRKEEERCAAVIQ
KAFRKYMMKVTKGDQGDQSDLENRPHSPLQTLCNGDLSSFGVVKGKVHYD
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagatgctacccagtaatctttccagatgagcggaatttccgccccttcact
tctgactctctggctgcaattgagaagcggattgccatccaaaaggagaaagataagtct
aaagaccagacaggagaagtaccccatcctcggcctcagcttgacctaaaggcctccagg
aagttgcccaatctctatggtgacattcctcgtgagctcataggaaagcccctggaagac
ttggacccattctacagaaatcataagacatttatggtgttaaacaaaaagaggacgatc
taccgcttcagtgccaagcgtgccttgttcatttttgggcctttcaattcaatcagaagt
ttagccattagagtctcagtccattcattgttcagcatgttcataatcggcaccgttatc
atcaactgcgtgttcatggctacagggcctgctaaaaacagcaacagcaacaatactgac
attgcagagtgtgtcttcactgggatttatatttttgaagctttgattaaaatagtggca
agaggtttcattctggatgagttttctttccttcgagatccatggaactggctggactcc
attgtcatcggaatagcgattgtgtcatgtattccaggaatcaccatcaaactgttgtcc
ctgcgtaccttccgtgtgttcagagctttaaaagcaatttcagtagtttcacgtctgaag
gtcatcgtgggggccctgctgcgctctgtgaagaagctggtcaatgtgattatcctcacc
ttcttttgcctcagcatctttgccctggtaggtcagcagctcttcatgggaagcctgaac
ctgaaatgcatctcgagggactgtaaaaatatcagtaacctggaagcttatgaccattgc
tttgaaaagaaagaaaattcgaatgaattcaaaatgtgtggcatctggatgagtaacagt
acctgttccacacaatatgaatgtaaccacaccaaaattaatcctgactataattatacg
aattttgacaactttggctggtcttttcttgccatgttccggcttatgacccaagattcc
tgggagaagctttatcaacagaccctgcgtactgctggactctactcagtcttcttcttc
attgtggtcattttcctgggctccttctacctgattaacttaaccctggctgttgttacc
atggcgtatgaggagcagaacaagaatgtagctgcagagatagaggccaaggaaaagatg
tttcaggaagcccagcagctgttaaaggaggaaaaggaggctctggttgccatgggaatt
gacagaagttcacttacttccctcgaaacatcatattttaccccccaaaagagaaagctc
tttggtattaagaaaaggaagtccttctttttgagagagtctgggaaaggccagcctcca
gggtcagattctgatgaagattcccaaaaaaagccacagctcctagagcaaaccaaacga
ctgtcccagaatctatcactggaccactttgatgagcatagagatcctctccaaaggcag
agagcactgagtgctgtcagcatcctcaccatcaccatgaaggaacaagaaaaatcacaa
gagccttgtctcccttgcggggaaaacctggcatccaaatacctcgtgtggaactgctgc
cccccatggctatgcattaagaaggtcctgagaactgtgatgactgacccgtttactgag
ctggccatcaccatctgcatcatcatcaacactgtcttcttggccatggagcatcacaag
atggagcccagttttgataagatgttgactacagggaatttggttttcactggcattttt
atagcagaaatgtgcctaaaaatcattgctcttgatccctaccactactttcgccgaggc
tggaacatttttgacagcattgttgctcttctgagttttgcagatgtaataaacagtaaa
tctcaaaagagaagctggccattcttgcgttccttcagagtgctcagggtcttcaagtta
gccaaatcctggccaactttgaacacactaattaagataatcggcaactctgtcggagcc
cttggaagcctgactgtggtcctggtcattgtgatctttattttctcagtagttggcatg
cagctttttggccatagcttcaattctcaaaagagtctaaaactctgtaacccgacaggc
ccgacagtctcatgtttacggcactggcacatgggggatttctggcactccttcctagtg
gtgttccgcatcctctgcggggaatggatcgaaaatatgtgggaatgtatgcaagaagag
aatgcatcatcatcattgtgtgttattgtcttcatatcgatcacggtgataggaaaactt
gtggtgctcaacctcttcattgccttactgctcaattcctttagcaatgaggaaagaaat
ggaaacttagaaggagaggccaggaaaactaaagtccagttagcactggatcgattccgc
cgggctttttgttttgtgagacacactcttgagcatttctgtcacaagtggtgcaggaag
caaaagttaccaaagcaaaaagaggtgacaggaggctgtgctgcacaaagcaaagatatc
attcctctggtcacagagatgaaaaggggctcagagacccaggaggagcttggtatacta
acctctgtaccaaagaccttgggcatcaggcatgactggacttggttggcgccacttgca
gaggaggaagatgatgctgaattttctggtgaagataacgcacagcccatcacacaacct
gaggcagaacaacaggcctatgagctccatcaggagaacaagaagcccaccagccaggga
gttcaaagtgtggaaattgacatgttccctgaagatgagcctcatttgaccatacaggat
ccccgaaagaaatctgatgttaccagtatactatcagaatgtagcaccattgatcttcag
gatggctttggattgttacctgagatggttcccaaaaagcaaccacagagatgtttgccc
aaaggctttggttgctgcttttcatgctgtagcatggacaagagaaagcctcactgggtc
atttggtggaacctgcggaaaacctgctaccaaatagtgaaacacagctggtttgagagc
tttattatctttgtgattctgctgagcagtggggcactgatatttgaagatgttcacctt
gagagccaacccaaaatccaagatttactaaattgtactgacgttatttttacatatatt
tttatcctggagatggtactaaaatgggtagcctttggatttggaaagtatttcaccagt
gcctggtgctgccttgatttcatcattgtgattgtctctgtgaccaccctcattaactca
aaggaattgaagtccttccgaactctgcgagcactgaggcctcttcgtgcgctgtcccag
tttgaaggaatgaaggtggtggtcaatgctctcataggtgccatacctgccattctgaat
gttttgcttgtctgcctcattttctggctcatattttgtattctgggagtacacttcttt
tctggaaaattttggaaatgcattaatggaacagactcagttataaattctaccatcatt
gcaaataaaagtcaatgtgaaaatggcaatttctcttggatcaaccagaaagtcaacttt
gacaatgtgggaaatgcttacctcgctctgctgcaagtggcaacatttaagggctggatg
gatattatatatgcagctgttgattccacagggaaagaacagcagccagagtttgagaac
aattcactcggttacatttacttcgtagtttttatcatctttggctcattcttcactctg
aatctcttcattggtgttattattgacaacttcaaccaacagcagaaaaagataagtggc
caagacatttttatgacagaagaacagaagaaatactataatgcaatgaaaaaattagga
tccaaaaaacctcaaaaacctattccacggcctctgaacaaatgtcaaggtcttgtgttc
gacatagtcacaagccagatctttgacatcatcatcataagtctcattatcctaaacatg
attagcatgatggctgaatcatacgaccaatccaaagccgtgaaatccacccttgaccat
ctcaactgggtctttgtggtcatctttacattagaatgtctcatcaaaatcttcgctttg
aggcaatactacttcaccaatggctggaatttatttgactctgtggtcgtgcttatttct
attgttagtacaatgatttctaccttggaaagtcaggagtacattcctttccctccgacg
ctcttcagaattgtccgcttggctcggattggccgaatcctgaggcttgtccgggctgca
cgaggaatcaggactctcctctttgctctgatgatgtcgctcccttctctgttcaacatt
ggtcttctactctttctgattatgtttatctatgccattttgggtatgaactggttttcc
aaagtgaatccagagtctggaattgatgatatattcaacttcaagacttttgccggaagc
atgctctgtctcttccagataagcacatcagcaggttgggattccctgctcagccccatg
ctgcgatcaaaagaaccatgtaacccctcagaaaactgccacctccctggcatagccaca
tcctactttgtcagttacgttatcatctcctttctcattgttgtcaacatgtacattgct
gtgattttagagaacttcaatacagccactgaagaaagtgaggaccctttgggtgaagat
gactttgacatattttatgaggtgtgggaaaagtttgacccagaagcaacacaatttatc
gaatattctgccctttctgactttgctgatgccttgcctgagcctttgcgtgtggcaaag
ccaaataaatatcaatttctagtaatggacttgcccatggtgagtggagatcgcctccac
tgcatggatgttcttttcgccttcaccgctagggtacttggtgggtctgatggcctggat
agcatgaaagcaatgatggaagagaagttcatggaaaccaatcctctcaagaagttgtat
gaacccatagtcaccaccaccaagagaaaggaagaggaaagatgtgctgcggttattcaa
aaggcctttcgaaagtacatgatgaaggtgaccaagggtgaccaaggtgaccaaagtgac
ttggaaaacaggcctcattcaccactccagactctttgcaatggagacttatctagcttt
ggggtggtcaagggcaaggtccactatgactga
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integrated database retrieval system
