Piliocolobus tephrosceles (Ugandan red Colobus): 111555601
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Entry
111555601 CDS
T07491
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03082
ATP-dependent chromatin remodeling
pteh04714
Thermogenesis
pteh05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111555601 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
111555601 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
111555601 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pteh03021
]
111555601 (SMARCC1)
03036 Chromosome and associated proteins [BR:
pteh03036
]
111555601 (SMARCC1)
Transcription machinery [BR:
pteh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111555601 (SMARCC1)
Chromosome and associated proteins [BR:
pteh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111555601 (SMARCC1)
PBAF complex
111555601 (SMARCC1)
GBAF(ncBAF) complex
111555601 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
111555601
NCBI-ProteinID:
XP_023087596
Ensembl:
ENSPTEG00000005716
LinkDB
All DBs
Position
2:88839716..89045604
Genome browser
AA seq
1105 aa
AA seq
DB search
MAAAAGGSGPGAAVGATGSGVAAAAAGLAVYRRKDGGPATKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGSAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHIYPYSSSQDDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHVKWILDTDIFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLKKDSENTPVKGGTVADLDEQDEETVTAGG
KEDEDPAKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
MEADPDGQQPEKAENKVENETDEGDKAQDGENEKNGEKEQDSEVSEDTKSEEKETEENKE
LTDTCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGQNPQQAHQHSGGPSLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP
GSMMPGQHMPGRMIPTVAANIHPSGSGPTPPGMPPMPGNILGPRVSLTAPNGMYPPPPQQ
QPPPPPPADGVPPPPAPGPPASAAP
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagcggcgggcggcagcgggcctggggcagcagtaggcgccacaggctcaggg
gtcgcagcggcagccgcaggcctagccgtttatcggcggaaggatgggggtccggccacc
aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc
aagcactacaagaagtatgttcatgcggatgctcctaccaataaaacactggctgggctg
gtggtgcagcttcttcagttccaggaagatgcctttgggaagcatgtcaccaacccggcc
ttcaccaaactccctgcaaagtgtttcatggatttcaaagctggaggcaccttatgtcac
attcttgggtctgcttacaagtataaaaatgaacagggatggcggaggtttgacctacag
aacccatcccgaatggatcgtaatgtggaaatgtttatgaacattgaaaaaacattggtg
cagaacaattgtttgaccagacccaacatctacctcattccagacattgatctgaagttg
gctaacaaattgaaagatatcatcaaacgacatcagggaacatttacggatgaaaagtcg
aaagcttcccaccacatttacccatattcttcctcacaagatgatgaagaatggttgaga
ccggtgatgagaaaagacaagcaagtgttagtgcattggggcttttacccagacagctat
gatacttgggtccatagtaatgatgttgatgctgaaattgaagatccaccaattccagaa
aagccatggaaggttcatgtgaaatggattttagacactgatattttcaatgaatggatg
aatgaggaggattatgaggtggatgaaaataggaagcctgtgagttttcgtcagcggatt
tcaaccaagaatgaagagccagtcagaagtccagaaagaagagatagaaaagcatcagct
aatgcccgaaagaggaaacattcgccttcgcctccccctccgacaccaacagaatcacga
aagaaaagtggcaagaaaggccaagctagcctttatgggaagcgcagaagtcagaaagag
gaagacgagcaagaagatctaaccaaggatatggaagacccaacacctgtacccaatata
gaagaagtagtacttcccaaaaatgtgaacctaaagaaagatagtgaaaatacacctgtt
aaaggaggaactgtagcggatctagatgagcaggatgaagaaacagtcacagcaggagga
aaggaagatgaagatcctgccaaaggtgatcagagtcgatcagttgaccctggggaagat
aatgtgacagagcagaccaatcacattattattcctagttatgcatcatggtttgattat
aactgtattcatgtgattgaacggcgtgctcttcctgagttcttcaatggaaaaaacaaa
tccaagactccagaaatatacttggcatatcgaaattttatgattgacacgtatcgccta
aacccccaagagtatttaactagcactgcttgtcggaggaacttgactggagatgtgtgt
gctgtgatgagggtccatgcctttttagagcagtggggactcgttaattaccaagttgac
ccggaaagcagacccatggcaatgggacctcctcctactcctcattttaatgtattagct
gatactccctctgggcttgtgcctctgcatcttcgatcacctcaggttcctgctgctcaa
cagatgctaaattttcctgagaaaaacaaggaaaaaccaattgatttgcagaactttggt
ctacgtactgacatttactccaagaaaacattagcaaagagtaaaggtgctagtgctgga
agagaatggactgaacaggagacccttctactcctggaggccctggagatgtataaggat
gattggaacaaagtgtcggaacatgttggaagtcgtactcaggatgaatgcatcctccac
tttttgagacttcccattgaggacccataccttgagaattcagatgcttcccttgggcct
ttggcctaccagcctgtcccctttagtcagtcaggaaatccagtcatgagtactgttgct
tttttggcatctgtggtggaccctcgcgtggcatctgctgcagcaaaagcggctttggag
gagttttctcgggtccgggaggaggtaccactggaattggttgaagctcatgttaagaaa
gtacaagaagcagcacgagcctctgggaaagtggatcccacctacggcctggagagcagc
tgcattgcgggcacagggcccgatgagccagagaagcttgaaggagctgaagaggaaaaa
atggaagccgaccctgatggtcagcagcctgaaaaggcagaaaacaaagtggaaaatgaa
acagatgaaggtgataaagcacaagatggagaaaatgaaaaaaatggtgaaaaggaacag
gatagtgaagtgagtgaggataccaaatcagaagaaaaggagactgaggagaacaaagaa
ctcactgatacgtgtaaagaaagagaaagcgatactgggaagaagaaagtagaacatgaa
atttccgaaggaaatgttgccacagccgcagcagctgctcttgcctcagcggctaccaaa
gccaagcacctggctgcagtggaagaaagaaagatcaagtccctggtagctctgttggtt
gagacacaaatgaagaaactagagatcaaacttcgacattttgaagagctggaaactatc
atggacagagagaaagaagctctagaacaacagaggcagcagttgcttactgaacgccaa
aacttccacatggaacagctcaagtatgctgagttacgagcacgacagcaaatggaacag
cagcagcatggccagaaccctcaacaggcccaccagcactcaggaggacctagcctggcc
ccacttggagcagcagggcaccctggcatgatgcctcatcaacagccccctccttaccct
ctgatgcaccaccagatgccaccacctcatccaccccagccaggtcagataccaggccca
ggttccatgatgcccgggcagcacatgccaggccgcatgattcccactgttgcagccaac
atccacccctctgggagtggccctacccctcctggcatgcctccaatgccaggaaacatc
ttaggaccccgggtatccctgacagcacctaacggcatgtatccccctccaccacagcag
cagccgccgccaccaccacctgcagatggggtccctccacctcctgcccctggcccacca
gcctcagctgctccttag
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integrated database retrieval system
