Parasteatoda tepidariorum (common house spider): 107436104
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Entry
107436104 CDS
T06106
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107436104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptep03032
]
107436104
03400 DNA repair and recombination proteins [BR:
ptep03400
]
107436104
DNA replication proteins [BR:
ptep03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
107436104
DNA repair and recombination proteins [BR:
ptep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
107436104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
TopBP1_BRCT0
LIG3_BRCT
RTT107_BRCT_5
BRCT_TopB1_SLF1
ECT2_BRCT0
TACO1_YebC_N
Motif
Other DBs
NCBI-GeneID:
107436104
NCBI-ProteinID:
XP_015903164
LinkDB
All DBs
Position
6:complement(39566724..39580233)
Genome browser
AA seq
1487 aa
AA seq
DB search
MQSKEAVTCDICFVLNGDSPAESTENLKDAFDAVDSHQMEPNWLPAKECLKFASKETKLF
VMDPFEGEVFEHLKSIRCRVLGPLCILYCLQYGDVLPKRPYPVYSVSMRKITVSCSNMDN
ARREDIFRKVELMGGLYSKDFTKSVTHLIVGEVGSKKYQVAAANFGLPIMIPEWVDDVWS
DGQYKRIHASDSCYDKYKCPVFKGLKITVSQLSMEERNAIQSIIETHGGTYLPPLKAHET
THLVLSEPSGQKYQYAKTWKIYCVNVNWIYESVKAGYCKDENLYKIENCSRTAQPKRSTP
NRDLTFEMPPVECSVINNVSIVSHLDETLRSDVSVAIVSKKQLKNSVLEKFDLATLPRNG
QFLDGCKIFLYGFNPSHLEKLKKIVNAGAGMRFNKYTDSVTHIVCDELSDDVMNIVKSSS
TKPFILNSKWLMECCTKEQLVDEKPFLFMDSAMLSPEKEESKSKAASSNSSYSSLQIAAP
VPDNITEIFNQYMPNKSQNQDSIVERKSDKISDNSKSKPNICNADPSTSDPQYDVPEVID
LADEGPTPSVAALFSGLKFVVAGFEEKDSDILCRMIESHSGVVLSPHSSIVADIAIVPII
KHEYELQASNIITNCWLQKCLEDSRIYDFEENELFSPVAIHAGQKPFVSYVISVSQYTGT
ERDCLMHLAEVMGATCQEYFVRKANKSRGILSNTHLIVATPEGNKYEAAKKWKIPAVSKQ
WVLDAAKLGVAPPVHSYLIDVCVKKCVVREDNPAENTSNSQINKRSLAKTFSNEFQKNLL
EPQEPLPELSTNAVPAGVEFSPALSKTSIPKLRLQKSDLELQEPLPGPSTNNIQAEVKMS
PVLSKAIERVSTPMLPKTVNKILSPHFSKSENSINESYESLDLNRSYKYKFRISGLLNEL
DSSTPANDRSMRRRSLAVEDIFGKNLASAMKGLNCTMGSESEYSNIDCEQIVNEQKLIKS
ENKIFKDVVLCVSKKLNNLQHELNEIVTSLGGDYIWSYDNSCSHFVFSGKPNDLSKDFRE
AKSDGKKIVCPEWVYACQEKNCILDETLYPHTLKLNMSLTNEISIVKNSSNRKSTEKENI
TIDVKTQNKKDPDFNKQLEELLVAAKSEKKRNSRRLVSSVSSSPTTEILSKVPRPVSDSF
VKPLCVEENANTEEHSGSQQFSQPYPIVWDDPTGRLEREKIAAMNANTRKFENLSKYEEE
STSRSEQISDKKFEEESVFEDEKRAEMKSVVESEFLKIKKFMFTNIPEPKKLKFIEIISD
LGGEVSDEKVFDLTATHLIMEKPLKNEKLLSSIASGKWVLHPRYLLASEEQKKFLAEEDF
EWGGSATNEFAQNLPAMSRKIANCPSRWRLNLSSDSSRKGAFEGWSVVIIAEDKGKQATY
NKILGAGSAEIISFEASNSFLDKISHVIVDMKKRTLSQIDLSPFISHNIYCIKPEYIAFY
LIDDPPPNVENFVLPEAKELLNNSLTSSKRRTLSMTTRGSNKRSRIA
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctaaagaagctgtcacgtgtgacatttgttttgtattaaatggtgatagtcct
gcagaatcaactgaaaacttaaaagatgcatttgatgctgtggattctcatcagatggaa
ccaaattggctgcctgcaaaagaatgtttaaaattcgcttcaaaagaaaccaaattattt
gttatggacccattcgaaggtgaagtattcgaacatttgaaatccattcgctgccgtgta
cttggacctctctgcattctttactgtcttcagtatggtgatgttctgcctaaacgtcca
tatcctgtttatagcgtatctatgagaaaaattactgtatcctgttcaaacatggataat
gctcgtagagaagatattttccggaaggtggaattgatgggtggattatacagcaaggat
ttcaccaaaagtgttacccatttaattgttggtgaagttgggtccaaaaaataccaagtt
gctgctgcaaattttggtttaccaatcatgatacctgagtgggtagatgatgtctggtca
gatggtcaatataaacgaattcatgcttctgatagttgctatgataagtacaaatgtcca
gttttcaaaggcttaaagattactgtttcacaattaagtatggaagaaagaaatgccatt
caatccatcattgagacacacgggggtacgtatttacctccattgaaagctcatgaaact
actcatcttgttctaagcgagcctagtggccagaaataccaatacgctaaaacttggaaa
atttattgtgtaaatgtgaattggatttatgaaagtgttaaagcaggttactgtaaagat
gaaaatctttataaaattgaaaattgtagcaggacagcacaaccaaaacgttcaacccct
aatagggatttaacctttgaaatgcctcctgtagaatgtagtgttataaacaatgtttca
attgtttcccacttagatgaaactctcagaagtgatgtatctgttgctatcgtcagtaaa
aaacaactaaaaaactctgtcttagaaaaatttgatttagcaactttgccaagaaatggt
caatttcttgatggttgcaaaatctttctttatggtttcaacccttctcatctagaaaaa
ttaaagaaaatagtcaatgctggtgctggaatgagatttaataaatacactgatagtgtt
actcatattgtatgtgatgagctctcagatgatgttatgaacatagttaaatctagctct
acaaagccatttattctgaattctaaatggctaatggaatgttgcaccaaagagcaacta
gtcgatgaaaaaccatttcttttcatggattcagctatgcttagtcctgaaaaagaggaa
tctaaaagcaaagctgcctcatcaaatagcagctacagttccctgcaaattgcagctcct
gttcccgataatataactgaaatttttaaccagtatatgcctaataaatctcaaaatcag
gattcaatcgtggaaagaaaatctgataaaatcagtgataattcaaaatctaagccaaat
atttgtaatgctgacccatccacatctgatcctcaatatgatgttcctgaagtgattgac
cttgcagatgaaggtcccactccaagcgtagctgcattattttctgggcttaaatttgtt
gtggctggatttgaggaaaaagattctgatattctttgtagaatgatagaaagtcattct
ggagtggttctctctccacatagctctattgttgctgatattgccatagttcctattatt
aagcacgagtatgagctgcaagcttcaaacataattacgaactgttggcttcaaaaatgc
cttgaagacagcagaatttacgattttgaagaaaatgaattattttccccagtagcgata
cacgcaggccaaaaaccatttgtatcgtatgtaatatctgttagtcagtatactggaact
gagagggactgcttaatgcacttagctgaagtaatgggagcaacttgtcaggaatatttt
gttagaaaagctaataagtctagaggaattttgtcaaacactcatttaattgttgcaact
cccgaaggcaacaagtatgaagctgctaaaaaatggaaaatacccgctgttagtaaacaa
tgggttctagatgctgcaaaactaggagttgctccacctgtgcacagctatttaattgat
gtttgtgttaagaaatgtgttgttcgtgaagataatcctgctgaaaatacgtcaaattct
cagattaataaaagaagtcttgctaaaacattttccaatgagtttcaaaagaatttattg
gaacctcaagagccattacctgagctatctacaaatgccgtgcctgcaggggttgaattt
tcacctgctttatcaaaaacttcgataccaaagctcagattacaaaaaagtgatctggaa
ttacaagagccattacctgggccatctacaaacaatattcaagccgaggttaaaatgtct
cctgttttatcaaaagcaattgaaagagtctcaacacctatgctgccgaaaacagttaat
aaaattttatcccctcatttctctaaatcagaaaattctatcaatgagagctatgaaagt
ttagatttaaacagatcttataaatataagtttcggattagtggtttactaaatgaatta
gattcgagcacccctgccaatgatcgcagtatgaggaggcgtagccttgcagtggaagat
atttttggaaaaaatctggcatctgcaatgaaaggcttgaattgtacaatgggttctgaa
tctgagtatagtaacattgattgtgaacagattgtaaatgaacaaaagctcataaagagt
gaaaataaaatttttaaagatgttgttttatgtgtttctaaaaaactaaataatttacag
catgagttgaatgaaattgtcacttcattaggaggggattatatatggtcttatgataat
tcttgctctcattttgtttttagtggtaagccaaatgatctgtctaaagatttccgtgaa
gctaagtctgatgggaagaaaattgtttgtcccgaatgggtttatgcgtgccaagaaaaa
aattgcattttagatgaaaccctgtatccacacacattaaaactgaatatgtcccttact
aatgaaatatctatagtcaaaaacagtagcaatagaaaaagtacagaaaaagaaaatatt
actattgacgtaaaaactcaaaataaaaaagatcctgacttcaataagcagttagaagaa
cttttagtggctgctaaatccgaaaagaaacgaaattccaggcgacttgtaagttctgtt
tccagtagcccaaccactgaaattttaagcaaagtcccacgacctgtttcggactctttt
gtcaaacctctttgcgttgaagagaatgctaacacagaagaacactctggctctcaacag
ttttcccagccatacccaattgtgtgggatgatcccaccggacggttagagagggaaaaa
attgccgccatgaatgctaacaccagaaagtttgaaaatctatctaaatatgaagaagaa
agcacgagcagatcggaacaaatttctgacaaaaaatttgaagaagagagtgtttttgaa
gatgaaaagcgtgcagaaatgaaaagtgttgttgaaagtgagtttttgaaaattaagaag
ttcatgtttactaatattccagaaccaaagaagttaaagttcatcgaaatcattagtgat
cttggtggggaggtttcagacgaaaaagttttcgatttgactgcaacgcatctaataatg
gagaagccattgaaaaatgaaaaacttttgtccagtattgcgtcaggaaaatgggtactc
catcctcgatatctgttggcttcagaagagcaaaaaaagtttctagcggaagaggatttt
gagtggggtggttcggccacaaatgagtttgctcagaacttgccagcgatgagtagaaaa
attgcaaactgtccatccagatggagattgaatctaagttcagatagcagtagaaaaggt
gctttcgaaggctggagtgttgtaattattgctgaagacaaaggaaaacaagcaacttac
aataaaattctcggagctggaagcgcagaaataatttctttcgaagcatcgaattcattc
ttagataaaatatctcatgtcattgttgatatgaaaaagagaacattatcccaaatcgac
ttaagtccttttatatctcataatatttattgtatcaaacctgaatatattgctttttac
ctaattgatgatccacctccaaatgtcgaaaattttgttttacctgaggctaaagagttg
ttgaacaattctttgacgtcatcaaagcgacgaactttaagtatgactaccagaggcagt
aataaaagaagtagaatagcctaa
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integrated database retrieval system
