Parasteatoda tepidariorum (common house spider): 107436812
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Entry
107436812 CDS
T06106
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptep04131
]
107436812
04121 Ubiquitin system [BR:
ptep04121
]
107436812
Enzymes [BR:
ptep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107436812
Membrane trafficking [BR:
ptep04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107436812
Ubiquitin system [BR:
ptep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107436812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
Zn_ribbon_19
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-Nse
zf-C3HC4_3
HypA
zf-RING_10
DZR
Motif
Other DBs
NCBI-GeneID:
107436812
NCBI-ProteinID:
XP_071041469
LinkDB
All DBs
Position
9:complement(45143925..45178513)
Genome browser
AA seq
350 aa
AA seq
DB search
MENSDVHQCENMAEAAVETPAARFFCHSCFLEVNPILPDFTCPRCQTGFIEELAQAPDPS
EESDEEAYLPFSQDGSDTNDEADALSQVADLWNMLNYMRRPEDSSHFPGGSQTQETGREG
RYNASRPGPSRRPRFSRNPNRRQQDYDNARTRTEGFLHHLVTTLSENTGLVPNASFPVFL
NLHSNPGDYAWGRGGWNAIITQLINQLDGTGPPPLPKEKIDEIPIVGISQEQVDKNLQCT
VCMEDFKLDEPVRRLSCDHHFHNECIIPWLELHGTCPICRKLLNDGSSQDNAFQSTSQTS
QNGPDVISLPGPSASQQASSNSLSDSDISRRSFNFNPLDSSIYDFNEEFD
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatagtgacgtccatcaatgtgaaaacatggcagaggcagcagtcgaaactccg
gctgctcggtttttctgtcatagctgcttcttagaagttaatcctattttgccagatttc
acatgtcctcgttgccagactggatttatagaagaattagcccaagctccagatcctagt
gaagaatcagatgaagaagcctacttacctttttctcaagatggttcagatacgaatgat
gaagctgatgctttatcacaggttgctgatttatggaatatgctaaattacatgcgaaga
cctgaagattccagtcattttcctggtgggagtcaaactcaagaaacaggaagggaagga
agatataatgcatcccgcccaggaccttctagacgacccagattcagtaggaaccctaat
cgtaggcaacaagattatgataatgccagaaccagaacagaagggtttttacatcattta
gtcactacattgtcagaaaatacaggtttagttccaaatgcaagttttcctgttttccta
aatcttcacagcaaccctggtgattatgcatggggaagaggaggctggaatgcaattatt
actcaactaattaatcaacttgatggtactggtcctcctcctttgcccaaagaaaaaata
gatgaaattcctattgtgggtataagccaagaacaagttgataaaaaccttcaatgtaca
gtttgcatggaagatttcaaattagatgaaccagttagaaggttatcctgtgatcatcat
ttccacaatgaatgtataattccttggttagaattgcatggtacatgtcctatttgtcga
aaactgcttaatgatggctccagtcaagataatgcctttcagtctacaagtcaaacctcg
caaaatggtcctgatgtgatatctctgcccggacctagtgcgtcacagcaagccagtagt
aattcactttcagactcggatatttcaagaagaagtttcaactttaatcctctagattct
tcaatttatgattttaatgaagaatttgattag
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