KEGG   Parasteatoda tepidariorum (common house spider): 107438179
Entry
107438179         CDS       T06106                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ptep  Parasteatoda tepidariorum (common house spider)
Pathway
ptep03030  DNA replication
ptep03410  Base excision repair
ptep03420  Nucleotide excision repair
ptep03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ptep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107438179
   03410 Base excision repair
    107438179
   03420 Nucleotide excision repair
    107438179
   03430 Mismatch repair
    107438179
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptep03032]
    107438179
   03400 DNA repair and recombination proteins [BR:ptep03400]
    107438179
Enzymes [BR:ptep01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     107438179
    6.5.1.6  DNA ligase (ATP or NAD+)
     107438179
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     107438179
DNA replication proteins [BR:ptep03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    107438179
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     107438179
DNA repair and recombination proteins [BR:ptep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     107438179
   NER (nucleotide excision repair)
    Other NER factors
     107438179
   MMR (mismatch excision repair)
    Other MMR factors
     107438179
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Presenilin
Other DBs
NCBI-GeneID: 107438179
NCBI-ProteinID: XP_042905927
LinkDB
Position
2:102861833..102927177
AA seq 996 aa
MIVLKCLRNPYCRFSNRLISLCSPTNLMTVVNSPLKVKLLRNQRNLMVIMKSSAADCSNS
SKKQNGFELTENDSPIKQGKKRKTRLIDSDEESNQSQNGVSNTVKNESEKMEVDDSQEVG
ESLQSNNSSTKLIGKQLLSSEDSLQNVKESSSKKIKLEGNSPGKTNVLSNLSDSRVNSQS
PSSSILCNRNSKLPPPPKRKTARKSMKASNAIETSFEEDSTKQFPSIETYEEEVVKKDSS
TKDENKTSKIKSDDIEESKEESSEKITSSKKPQAIHPFFAKKESPVKSKNVSESEKEEEK
NSSSDGESESKKNNKNPDDSEKVDESSNEKAKKKTVNSSSSGVHYDPSKSKYHPIEDACW
KRNEKVPYLALAKTLEFIENTSARLKIVEILANYFRSVIVLTPDDLLQSVYLCLNRIAPE
YEGIELGVGDMVLMKAVAQATGRTLDKIRAEVKEKGDLGLVAESSRGNQKVMFAPPKLTV
ASVFSKFKEIAKMSGNAAMAKKTDKIQTLFVACRDCEAKYIIRSLSGKLRIGLAEQSVLA
ALGRAVVLTPPGQTYPPDKIDTSSGMSSEKFKKLQDEKTLILKTTYCECPNYDLMIPVLL
KEGIDRLSEHCQLSPGCPLKPMLAHPTTGIDEVLQRFVNNDFTCEFKYDGERAQIHRTDK
GEVKIFSRNQEDNTSKYPDIIARISKALKDTTKSFILDTEAVAWDHEMKQILPFQILSTR
KKKDAAKSEIVVQVCVMAFDLLYLNGESLVKKPLKERRELLHSSFDEVPNEFMFVTYKDG
NSAETMQEFLDESIKGNCEGLMVKALKVDASYEIAKRSHNWLKLKKDYLNGVGDTLDLVV
IGGYHGKGKRTGTYGGFLLACYDNDNEEFQSICKLGTGFKEDELEAHTKFLKNHVISAPK
SYYRFDHSLEPDEWFEPEQIWEVKCADLSISPIHKAAIGIVDPEKGISLRFPRFLKIRDD
KKVEEATNSSQIAEMYRRQDQVQNMKAKPKNEENYY
NT seq 2991 nt   +upstreamnt  +downstreamnt
atgattgtcttaaaatgtctcagaaatccatactgtcgtttttcaaacagactgataagt
ctttgcagtccaacaaatctaatgacagtggtaaactctcccttaaaagtgaaacttcta
aggaatcagcggaacttaatggtcataatgaaaagttctgcagctgactgtagtaattca
tcaaaaaaacaaaatggttttgaattaacggaaaatgatagtccaataaaacaaggtaaa
aagcgcaaaactcgtcttatagatagtgatgaagagtcaaatcaatctcaaaatggggtt
tcaaatactgttaagaatgaatcagaaaaaatggaagttgatgatagtcaggaagttgga
gaaagtcttcaaagtaataactcttcaacaaaactgataggaaaacaactgttatcaagt
gaagattctctgcaaaatgtgaaagagtcttcttcaaaaaagatcaaacttgaaggtaat
tcccctgggaaaaccaatgtgctcagcaatttatcagattctagagttaactctcaatca
ccttcttcgtcaattttatgtaatagaaactctaaactgcctccaccgcctaaaagaaaa
acagcacgcaaatctatgaaagcttcaaatgctattgaaacgagttttgaagaagattca
acgaagcaatttccaagcatcgaaacatatgaagaagaggtggttaaaaaagattcttca
actaaagatgaaaataagacttcaaaaattaaatctgatgatattgaagaaagtaaagaa
gaatcttcggagaaaattacttcttccaagaaacctcaagcaattcaccctttttttgcc
aagaaagagtctcctgtaaaatcaaaaaatgtatctgagagtgaaaaagaggaagagaag
aatagctcatcggatggggaatctgagtccaagaaaaacaacaagaatcctgatgattca
gaaaaggttgatgaatcgtcaaatgaaaaagctaaaaagaaaactgtaaattctagttcc
tctggagttcattatgacccttcaaaaagtaaatatcatcccattgaagatgcttgttgg
aaacgtaatgaaaaagttccctatcttgcactggctaagacattggaatttattgaaaac
acaagtgctaggctgaagatagttgaaattcttgcaaactactttcgttccgtcattgtt
ctgacaccagatgacctcttgcagtctgtgtacctgtgcctaaatcgcatcgctccagag
tatgaaggtattgagttgggagttggtgacatggtgttgatgaaagccgttgctcaggct
accggacgaactctcgataaaataagggcagaagtgaaggaaaaaggagatcttgggcta
gttgctgagagtagccgaggtaaccagaaagtgatgtttgctcctccaaaattgacagtg
gcttcagtattctctaaattcaaagaaattgctaaaatgtctggaaatgctgcaatggcc
aagaagaccgataaaattcagacgttgtttgtcgcttgccgagattgtgaggccaaatac
atcatcagatcactaagcgggaaactgagaattggattagcagaacaatctgttcttgca
gctttgggcagagctgttgttttgacacctcctggccaaacatatcctcctgataaaatt
gacacctcatctggaatgtctagtgagaaattcaagaaacttcaggatgaaaaaacactt
attctgaaaactacctactgtgaatgccctaattatgatttgatgatacctgttcttttg
aaagaaggtatagatcgtctttctgaacattgccaactttcaccgggctgcccactgaag
cccatgttagctcaccctacaacggggattgatgaagtgctgcaacgtttcgttaataat
gatttcacgtgtgaatttaaatatgatggtgaacgagctcaaatccatagaacagacaaa
ggtgaagttaaaatatttagccgtaatcaagaagataacacttcaaaatatcccgatatt
attgccagaatttctaaggcattgaaagatactacaaaatcatttatccttgacacagaa
gctgttgcttgggatcatgaaatgaaacaaattttaccctttcaaatacttagtactaga
aaaaagaaagatgctgctaagtcagaaattgtagttcaagtttgtgttatggcttttgat
ttgctctatttaaatggagaatctttagtgaagaaaccattgaaagaaagaagagagctc
ctccattcatcattcgatgaagtgcctaacgagttcatgttcgtcacctacaaagatggt
aatagtgccgaaacaatgcaggagttcttagatgagtccattaaaggtaactgtgaaggt
ttaatggtaaaggctttgaaagttgatgcttcatatgaaatagccaagagatctcataat
tggttgaagttaaaaaaagactatttaaatggtgtcggcgataccctagatcttgttgtt
attggtggataccatggtaaaggcaaaaggacaggtacctatggtggatttttacttgcc
tgctatgacaacgacaatgaggaatttcaaagtatttgtaaattaggtactggctttaaa
gaagatgagttagaagcgcatacaaagttcttaaaaaaccatgttatcagtgctcccaag
tcatattatagatttgatcacagtttagagccagatgaatggtttgaacccgagcagata
tgggaagttaaatgtgctgatttgtctatatcgcctatccataaagcagccattggtatt
gttgacccagagaagggcatttccttaaggttcccccgttttctcaaaatcagggatgac
aaaaaggttgaagaagcaacaaattcctctcagattgctgaaatgtatcgaagacaagat
caagtacaaaatatgaaagcgaaacctaaaaatgaagaaaattattactga

DBGET integrated database retrieval system