Parasteatoda tepidariorum (common house spider): 107438380
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Entry
107438380 CDS
T06106
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107438380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107438380
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107438380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_19
ANAPC3
ARM_TT21
DUF4032
Motif
Other DBs
NCBI-GeneID:
107438380
NCBI-ProteinID:
XP_015906148
LinkDB
All DBs
Position
3:complement(36710439..36719120)
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AA seq
699 aa
AA seq
DB search
MCDEESDARKASSSDLSYQAVPDVDREMAAQAYQEFELEKFEQCASILKKLMSRRPQDSK
VMHNLAVTEYYLSNCKKTEIFNKKMVEVCRLAHIDVQDLESLDDVDSCVALYNQAIVMFH
LHQYHSAISILDKVFQFVEPLEENLARNVCFLLLELYLCVYQPRKALCLIGYLETMLFSN
NKNCGKSNSKEKDGQKEENGDSVNEIYRRRLQLCKARCYAMIKTSKACKREIKNLMSSGT
QAQNIPAFYLKSQLEYQRGNYRKAIKLLNSVTLPTDISKYIKETGDFLPTIYYNNVGCIH
FYMGKPNLGCHYITKALECFESEIASIADSREGKSSARPLHLMSTSTQHQLMYNLGMQRL
QAQRYLEAFKCFKQVIPSYHSNPRLWLRIAECCINLHKPDNTAQFVELKNVSFIKSMVGT
GPHRKLILNSSSEKSSADIPKTSSPPNSDTPSLHFALLCLKNALHLVGENPTNESLSASV
PPSEETDSSEESNILSTLPSNFVQGAEILSLRNSILIAASYVSLCLGDVLLAHEYAKSLL
AQPRISGAHKFLAHLYAGESLLLMDRITDAVEHLNYQCTSDIELAFPVNSSEVSLKHQTR
FDSKLNEKNDDGSRPVGNVPNWFPNAISSAKFITQYNLAVAYAVREEWSKSLECLMQTTS
TNGKMPPRALSLLIYVQLHQGTAENTKAYVKQYSTYKST
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgaagaatctgatgcaagaaaagcttcatcttcagacttaagttatcaagca
gttcctgatgttgatagagaaatggctgctcaagcatatcaagagtttgaactagaaaaa
tttgaacaatgtgcatctatacttaaaaaacttatgtctcgtagaccccaagactctaaa
gttatgcataatttggctgtaacagaatactatttatctaactgtaagaaaactgaaatc
tttaataaaaagatggtggaagtatgtaggcttgcacacatcgatgttcaagatctagaa
tctctagatgatgtagacagttgtgttgcattatacaatcaagcaattgtaatgtttcat
ctgcatcaatatcattcagccatcagcattctagataaagtatttcagtttgttgagcct
ttggaagaaaatttggccagaaatgtatgttttttgctcttagaattatatctatgtgtg
tatcagccaagaaaagcattatgcctgattgggtacttagaaacaatgcttttttctaat
aataaaaactgtggaaaatctaattcaaaagagaaagatggtcaaaaagaagaaaatggt
gatagtgtaaatgaaatatataggcgcagattgcagctgtgtaaggctaggtgctatgct
atgatcaagacatccaaggcgtgtaaaagagaaataaagaatttgatgtcttctggaacc
caagctcaaaacattcctgctttttatttgaagagccaactcgaatatcaacgtggtaat
tatcgtaaagctataaaattgcttaattctgtcactttgcctacagatatttctaagtat
ataaaagaaactggagattttctgcctaccatttactacaataatgttggttgcattcac
ttttacatgggtaaaccaaacttaggttgccattacatcactaaagctttagagtgtttt
gagtctgaaattgcatcaattgccgattctagagagggcaaatcgagtgctcgtcctcta
catttaatgagtacatcaacacaacatcagttgatgtataatttaggtatgcagcgttta
caagctcagagatatttggaggcattcaaatgcttcaagcaagtcataccttcgtatcat
agcaatccacggctgtggttacgcatagcagaatgctgcatcaatttgcacaaaccagat
aatactgctcagtttgttgaattaaaaaatgtctcttttataaaatcaatggttggcacg
ggaccacacaggaaacttatcttaaattcttcatccgaaaagtcttccgctgacatccct
aaaactagttctcctcccaattctgatacaccatctttgcattttgctttgctctgcttg
aagaatgctctgcatcttgtgggagaaaacccaaccaatgagtctttatctgccagtgtg
ccaccttctgaagaaaccgattcatcagaagaaagtaatattctatcgactctgccatcc
aattttgtacaaggggcagaaatcttgagcttacgaaactccatcctgatcgctgcttct
tatgtatctctgtgtctgggtgacgtcctcttagctcatgaatatgctaaatctttgcta
gcgcagccaaggatttctggtgctcacaagtttttagctcacttgtatgctggtgaatcg
ctcttgttgatggatcgtataacagatgcagttgagcatctcaattatcagtgtacttca
gatatagaattagcctttccagttaactcttctgaagtttctttgaaacaccaaacccgt
tttgattctaaattgaatgaaaagaatgacgatggaagccgtccagtgggtaatgtccct
aattggtttcctaatgctatttcatcagcaaaatttattacacagtataatttagccgta
gcttatgcagtcagagaagagtggagtaaatccttagaatgtttaatgcagacgacgagc
acaaatggtaagatgccaccacgtgcattgtcacttttgatttatgttcaattacatcag
ggaacggctgagaacactaaagcttatgttaaacaatattctacttataaaagtacttag
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