Parasteatoda tepidariorum (common house spider): 107438428
Help
Entry
107438428 CDS
T06106
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107438428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptep03021
]
107438428
03036 Chromosome and associated proteins [BR:
ptep03036
]
107438428
Transcription machinery [BR:
ptep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107438428
Coactivators
SAGA/TFTC/STAGA complex
107438428
Chromosome and associated proteins [BR:
ptep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107438428
STAGA complex
107438428
TFTC complex
107438428
SAGA complex
107438428
SLIK complex
107438428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WD40_RFWD3
WD_LRWD1
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
Beta-prop_SPT8
LisH
Motif
Other DBs
NCBI-GeneID:
107438428
NCBI-ProteinID:
XP_042903545
LinkDB
All DBs
Position
9:complement(43989504..44028667)
Genome browser
AA seq
704 aa
AA seq
DB search
MNNGESQPMEVEPPQNDVTTPLTDSINMEIIEKEVLSSNIDSTVKKDKTEDVKEKHEELN
KNAILAVLQFLKKHNLQETEAILRKETKITDDDKASESAQSESDVSSVLSTYKSEGDPDI
YEDTYISLKKFIETSLDTYRHELSMILYPVFVHMYLELVYNEHESQALYFMDRFGPEQEE
YYLEDVKKLSCLTKKDHMKGNEFMDNFRSGQFTVRMSRDTYNFLKRHLQDKKHNVLQNII
QEHLYLDVYEGISRTKSQIDSTAGALAGEAARQANKSKVFYGLLKEPDIQIPLDDEDEGQ
DGDDKPKKKKPKKDPLLSKKSRNDPNAPQANRIPLPELRDADKLDKINALREAQKRVRLG
PNNLPSICFYTFLNSHQGVTCAEISEDSSLLSAGASDSLVRIWSLNSNKLKAMKPAQELE
NIDKEADDVLYRMMDERNACDIRTMVGHSGPVYSTSFSPDRNLLLSCSEDATVRLWSLQT
WTNVVCYKGHCFPIWDVKFSPYGYYFASCGHDRTARLWATDQYQPVRVFSGHVSDVDCIQ
FHPNSNYIATGSSDRTIRLWDVLSGSCVRVMTGHKGAVYNLAFSTCGRFLASAGSDKKIL
IWDIAYGHLLAELTGHHDTIYSLCFSREGTVLASGGLDNCIKLWDISKLLEEIDLEDLNI
SHAPTVKNTSDAYLLGTFKTKSTPVLSLHFTRRNLLLSAGMYLG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaataatggtgaaagtcaaccgatggaggttgaacctcctcaaaatgatgttacaact
ccattaactgattcaataaacatggaaatcatagagaaagaggttttatcttcaaatatt
gattctacagtaaaaaaagataaaactgaagatgttaaagagaagcatgaagagttaaat
aagaatgctattttagcagttttgcaatttctaaaaaaacataatcttcaggaaactgag
gccattttaagaaaagaaactaagataactgatgatgataaagcctcagagtcagcacaa
agtgaatctgatgtgagcagtgttttgtctacgtacaaaagtgaaggggatccagacatt
tatgaagacacttatataagtttgaagaaattcattgaaacatctttggatacatacagg
catgaattgtctatgatactttatccagtttttgttcatatgtatttagaacttgtctac
aatgagcacgaatctcaagctctatattttatggacagatttggacctgaacaagaagaa
tattatttagaagatgtaaaaaaactatcgtgtttgactaaaaaggatcacatgaagggg
aacgaattcatggataattttagatcaggacaattcactgtaaggatgtccagagatact
tacaattttctgaaaagacatcttcaggataagaaacacaatgttttacaaaatataatt
caagaacatttgtatcttgatgtgtatgaaggaatctctcgaaccaaatcgcagatcgat
agtactgctggtgctctcgctggtgaagctgccagacaagctaataaatccaaagtattt
tatggattactgaaagaacctgatattcagattccacttgatgatgaagatgagggtcaa
gatggtgatgataagccgaaaaaaaagaaaccaaagaaagatcctttgttatcaaaaaag
tctcgtaacgatccaaacgctcctcaagcaaatcgcattcctctgccagaattgcgtgat
gctgataaactagataaaattaatgctttaagggaagctcagaaacgtgttcgcttgggc
ccaaataatttgccatctatttgtttttatacattcttgaattctcatcaaggagttaca
tgtgctgaaataagtgaagattctagtctgttaagtgctggagcttcagactctttagta
cggatatggagcttaaattccaataaactgaaagcaatgaaacctgctcaggaacttgaa
aatattgacaaagaagctgatgacgtactgtataggatgatggatgaaagaaatgcatgt
gatataagaacaatggttggacatagtggtcctgtttattctactagtttcagtcctgac
agaaatcttctactttcatgttctgaagatgctacagttcgattgtggagtttacaaact
tggacaaatgttgtttgttataaaggacattgctttccgatatgggatgttaaatttagt
ccatatggttattactttgcatcctgtggacatgatagaacagcccgattgtgggcaaca
gaccagtatcaacctgtcagagtttttagtggacatgtatctgacgtcgattgtattcaa
tttcaccctaattcaaattacatagctactggctcaagtgataggaccataaggttatgg
gatgttttatccgggagctgtgtcagagtcatgactggtcataagggagctgtgtataat
ttagcattttcaacttgtggtagatttcttgcatctgctggatcggacaaaaaaatactc
atttgggatattgcatatggtcatttgttggcagaacttaccggtcaccatgatactatt
tattccttatgtttcagtcgagaaggaactgtactagcttctggtggattagacaattgt
ataaaactatgggacatcagtaaattattggaagaaatagatttggaagatctaaatatt
tcacatgcaccaactgtcaagaataccagtgatgcttatttactgggaacattcaaaact
aaatctacacctgtgctatctttgcatttcactagaagaaatctgttattatctgcagga
atgtatcttggttaa
DBGET
integrated database retrieval system
