Parasteatoda tepidariorum (common house spider): 107438800
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Entry
107438800 CDS
T06106
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptep03021
]
107438800
03036 Chromosome and associated proteins [BR:
ptep03036
]
107438800
Transcription machinery [BR:
ptep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107438800
Chromosome and associated proteins [BR:
ptep03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
107438800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
SH2
S1
Tex_central_region
HHH_9
Spt6_S1
HHH_3
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
107438800
NCBI-ProteinID:
XP_042902202
LinkDB
All DBs
Position
2:complement(89592205..89649694)
Genome browser
AA seq
1676 aa
AA seq
DB search
MADFVVSEAEESEDEDIINRKRKFQEEEDDEEEEEDDEEKLREEMKDLINDDEEEDKEDS
DEGEIVRKKKKHHDDYDDALEDEDYDLIEENLGVKVQRKKKFKRLRRIEDEESDNEEAEE
GEDREAIANELFDADDGEGEEDEPRVAEDTLGNLEESGEESDESDFIVDDDGQPISKGKK
KRHIKYNDAALQEAQEIFGVDFDYADFAQEGDEYDEDDEDYEEEEEDEDGETRPKQKKTA
RKQTTKKTIYDIFEPVELERSHMTDLDKEIKAVDIPERFQLRAVPVTEAEDDEIEEEAEW
IYKQAFSIPTISLQEGEHAGTGHQPIAGRKNPSAVGKIREALKFIRNNKFEVPFIAFYRK
EYVEPDLNINDLWTVYKWDEKWYQLRTRKNNLSKLFEKMQQYQCDTIMADPDKPLEEGIR
ALEVTDIIRLKKAQSMEEIQDCYSHFMLYYGHDIPAMKEHMRKKQQKEMENGEELEEDTK
IKHVPHTDAYTVCKLSGIDGLAKKFGLTPEQFGENLRDNYQRHEVDQYPVEPKEVASDYV
CKRFPTADECLTVAKFMVATQIAREPAVRKCVRQIFFERSKITVRPTQKGIKEIDENHPC
YSMKYLTKSVKDLRGEQFLKLSMAERSEEVKITIAMQHQGGKDSRHVYLEEIKQLYERDE
YSKNVLDWNVQRHQALDLALTKMLYPSFEKELRLRLLNEAKEGVIKACCRKLYNWLKVAP
YQVDPQVEDEDDFDTREGVRVLSIAYQGNANNVPAFCAMVDGDGEVMEFLRLKYLLNRRN
SRREDDRIKKEADLHVLRKLILKKKPHVVVVAGESREASMIVADVKEIVNDLIDSEQFPP
ISVEIMDNELAVLFSKSNRGVSDFRDYPELLRQGVSLARRLQDPLIEFSQLCTPDEEILC
LKYHPLQGEVNKDELVNALNLEFVNRTNEVGVDFNRAIQFNHTANLVQFVCGLGPRKGTF
LVKTLKTANQQLESRTQLITFCKMGPKVFVNCAGFIKIDTSSLVDSTETYVEVLDGSRVH
PEAYEWARKMAVDALEYDDTSDDVNPAGALEEILENPEKLKDLDLDAFAEELERQNYGNK
SITLYDIRAELNHKYKDLRSEYKSPSPEEIFNMLTKESPETFYIGKLVLCFVINIARRKP
KHDQLENANPVRNAETNLWECPFCLKKNFPELSDVWSHFDSSNCPGQAVGVRVRLDNGLS
GFIHTKMLSDKHVSNPEDRVRERMTLHARITKIDVERFAVDLTSRSSDLADKNNEWRPPK
DSYYDYDAEELDRKKVEDSNKKQNRQVYLKRVIIHPSFKNVSFKEAEALLNTMDQGDVII
RPSSKGNNHLTVTWKVADNINHHIDVKEEGKENDFSLGHSLIIGDESFEDLDEIIARHVQ
PMAGYARELLNFKYYVDANGGKKEEMEKILTAEKSKAPQKIPYYVSASAEYPAKFLLSYL
PRNKVRHEFITVMPEGFSYRGHEFRSVNQLFGWFKRHFRDAPPGATPSLRTPARTPMGQS
SYIGNTPSRNIAAFDIQSIQRVAANMPNQLYNTLSQVAGQTPAFQGASNYTANFGGAYSY
QPYTPSQPVATPLVTPSYHAVPTPAHSQVPTPRYPQTPQQNWASQTPSRTTPKAPPVNTN
PPSVQDWKRMAEQWAKNRQESLVPGQITPRTPMRGSPSPMMIESTPADATPLIDEY
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttcgtagtaagcgaagctgaagaatctgaagatgaggacatcatcaacagg
aaacgtaaatttcaagaagaagaggacgatgaagaggaagaagaagacgatgaagaaaag
ctaagggaagagatgaaagatctaattaatgatgatgaagaagaggataaggaagattcc
gatgaaggagaaattgtaagaaagaaaaagaaacatcatgatgattatgatgatgcttta
gaagatgaagattatgatttaattgaagaaaatttaggggttaaagtacaaagaaaaaaa
aagtttaaacgattacgaagaattgaggatgaagaaagtgataatgaagaagcagaagaa
ggtgaagatagagaagccatcgctaatgaactctttgatgcagatgatggggagggagaa
gaggatgagcccagagttgcagaagatacacttggtaatttagaagaatcaggcgaagaa
tctgatgagtcagattttattgttgatgatgatgggcagccaatttcaaaggggaagaaa
aaaaggcacattaaatataatgatgcggccttacaagaagcgcaagaaatttttggtgtt
gattttgattatgccgattttgctcaggaaggagatgaatatgatgaggatgatgaagat
tatgaagaggaggaagaggacgaagacggagagactcgacccaagcagaagaaaacagct
cgcaaacagactaccaaaaaaactatatatgatatatttgaaccagtggaactggagaga
agtcatatgacagatcttgacaaagagattaaagctgttgatataccagaaagattccag
ttgcgagcagtacctgtaacggaagctgaagatgatgaaatcgaggaggaagccgaatgg
atctataagcaagccttcagcattcctaccatatcacttcaagagggggagcatgctgga
actggtcaccaacctattgccggccgtaaaaatcccagcgctgtgggaaagataagagaa
gctttaaaatttatccgtaacaataagtttgaggttccttttattgcattttatagaaaa
gaatatgtagagccagatttaaatattaatgatttatggactgtatataaatgggatgaa
aagtggtatcaattaagaacaaggaagaataatttgagtaaattgtttgaaaaaatgcaa
cagtatcaatgtgataccattatggctgatccagacaaacctcttgaagagggaattcga
gcacttgaagtcactgatattataagattgaaaaaggcacaaagcatggaggaaatccag
gattgttattctcacttcatgctgtattatggtcatgacataccagccatgaaagaacac
atgagaaagaagcagcaaaaagaaatggaaaatggcgaagaattagaggaagatacgaaa
atcaagcatgttcctcacactgatgcttatactgtgtgcaaactttctggaatcgatggt
cttgctaagaaatttggtctgacacctgagcagtttggggaaaacttacgtgacaattat
caaaggcatgaggttgatcagtatcctgttgaacctaaagaagtagcatcagattatgtt
tgcaagcgtttccccactgccgacgagtgtttgactgttgcaaaatttatggtggctact
caaatagcaagagaaccagcagttcgaaaatgcgtgagacaaatttttttcgaaagatcg
aaaataactgtgaggcccactcagaaaggaatcaaagaaatagatgaaaaccatccatgc
tatagtatgaagtatttaaccaaatctgttaaagatttacgtggagagcagtttttaaaa
ttaagcatggctgaaagaagtgaagaggttaaaattaccatagctatgcaacaccaagga
ggcaaagatagtcggcatgtttatttagaggaaattaagcagctatatgagcgagatgaa
tacagtaaaaatgttctggactggaatgttcaaagacatcaagcattggatcttgcttta
acaaaaatgctgtatccctcctttgaaaaagaactcaggctgcgtttattaaatgaagct
aaagagggtgttatcaaggcttgctgtcgaaagttatacaactggttgaaagttgctcct
taccaagtagatccccaggtagaggatgaagatgattttgacaccagagaaggagtgaga
gtgctttccattgcttatcaaggaaatgcaaacaatgtaccagctttctgtgcgatggtt
gatggagacggagaagttatggaatttctgcgccttaaatatttattgaacaggagaaat
tcccgcagagaagatgatcgtataaagaaggaggcagacttgcatgtgctaagaaaactc
attcttaagaaaaaacctcatgttgtagttgtagctggtgaatcgagggaagcatcaatg
attgtggcagatgttaaggaaatagtgaatgatttaatcgatagtgagcagttcccaccc
attagtgttgaaattatggacaatgaactagcagttttattttccaaatcaaatagagga
gttagtgactttagagattatccagagcttttaaggcaaggtgtttctcttgctcgtcgt
ttgcaggatccactcatagaattttcacagctttgtaccccagatgaagaaattctctgt
ctaaagtatcatcctttacagggggaggtgaataaagatgaacttgtcaatgcccttaat
ttagagtttgtaaatcgaacaaatgaagttggcgtcgatttcaacagagctatccagttc
aatcatactgctaatttagtacagtttgtttgcggcttgggacctagaaaagggacattt
ttagtcaagactctaaaaacagccaatcagcaattagagagcagaacacagttaattacc
ttttgcaaaatgggacccaaagtttttgttaactgtgctggattcataaagattgacacg
tcttctttagtagacagtacggagacctatgttgaagtgttagatggatctcgtgttcac
ccagaagcatacgaatgggctcgtaaaatggctgttgatgctcttgaatatgatgataca
tctgatgatgtcaatcctgctggtgctttagaggaaattttagaaaatccagaaaaactg
aaggatcttgatttagatgcttttgctgaggaattagaaagacagaattatggaaataaa
agcatcacactttacgatattcgagctgaactaaatcataaatataaagatctgagatct
gaatataaatctcctagtcctgaagagattttcaatatgttaactaaagaatcacctgaa
acattttatataggtaaattagtgttatgttttgttattaatattgctagaaggaagcca
aaacatgatcaacttgaaaatgcaaatccagttcggaatgctgaaactaatctttgggag
tgtcctttttgtttgaagaagaactttcctgaattgagtgatgtgtggagccatttcgac
agcagtaattgtcctggccaagctgtgggagtaagagttaggcttgataatggtttatct
ggatttattcacacaaaaatgttaagtgacaagcatgtatccaatcctgaagatagagtt
agggagagaatgactcttcatgctcgaatcactaaaattgatgttgaaagatttgctgtt
gatttgacatctaggtcatcagatctcgctgataaaaataatgaatggagaccaccaaag
gattcatattatgattatgatgctgaagaactagatcgaaaaaaagttgaagacagtaat
aagaaacaaaataggcaagtctacctgaagcgagttattatccacccatcttttaaaaat
gtcagttttaaagaggcagaagcattacttaatacaatggaccaaggtgacgtcattatt
cgacctagtagtaagggtaataatcacctaacagttacttggaaagttgcagacaacatc
aatcaccatattgatgtaaaagaggaagggaaagaaaatgattttagtttggggcattcc
ttaattattggagatgagtcatttgaagaccttgatgaaataattgcgaggcatgtgcaa
cccatggccggttatgcaagagaattgctgaattttaaatattatgttgatgctaatgga
ggtaaaaaagaggaaatggaaaaaatattaactgcagagaaaagcaaagcacctcaaaaa
ataccttattatgtctctgcttctgcagaatatccagcaaagtttctactttcttatctt
cctaggaataaggttcgccatgaatttataacagttatgccagagggtttcagttatcga
ggtcatgagttccgatctgtaaatcaactgtttggctggttcaaaagacacttcagagat
gcaccaccaggtgctactccaagcttacgaacacctgcacgtacacctatgggacagtcc
tcttatattggcaatacaccaagccgaaatattgctgcctttgatattcagtctattcaa
agagttgccgcaaacatgccaaatcagctctacaatactttgtcacaagttgctggtcaa
acacctgcttttcaaggtgcaagcaactatactgcgaattttggtggtgcttatagctat
caaccctatactccttctcagcctgttgctacacccctggtcaccccatcttatcatgct
gtaccaactcctgctcactctcaagtacccactccaaggtacccacaaacaccccaacag
aactgggcatctcaaacaccttccagaaccacacccaaggctccgccagtgaatacaaat
ccaccctctgtacaagactggaaacgaatggcagaacagtgggctaaaaataggcaagag
tcacttgtgcctggtcaaataactccaagaactcccatgcgagggtcaccaagtccaatg
atgattgaatctacacctgctgatgcgactcctcttattgatgaatactaa
DBGET
integrated database retrieval system
