Parasteatoda tepidariorum (common house spider): 107438966
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Entry
107438966 CDS
T06106
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107438966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107438966
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
107438966
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
107438966
NCBI-ProteinID:
XP_015906880
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All DBs
Position
6:41626386..41694521
Genome browser
AA seq
717 aa
AA seq
DB search
MPDMSIFEDPGAFFSDKNKKAEKRLEQNPYDVEAWNLILRDASHQKIEDARPYYEKLVAQ
FPSAGRYWKLYIEHEMKSRNYERVEKLFTRCLVKVLNIDLWRVYLSYVKETKGSLPSYRE
KMAQAYDFALEKMGMDINSYPIWNDYINFLKNVEAVGSYAENQRITAVRKVYQRGIINPM
MNIEQLWKDYVNYEQGINSIIADKMIQDRSRDYMNARRVAKEYEAVTRGLNRNAPSTPPQ
GLPEEIKQVELWKKYILWEKSNPLRTEDQSVLTKRVMFAYEQCLLCLGHHPDIWYEAALF
LELSSKLLQEKGDLAAGKMFSEEAAAVYDRATATFLKTNMLLHFAYADFEEGRMKYDKVH
AIYNKFIENPDIDPTLAYIQYMKFARRAEGIKSARNIFRKMRENEKTRYHIFVAAAWMEY
YCNKDKNIAFKIFELGLKKHGDNPDYVLSYIDYLSHLNDDNNTRVLFERVLSSGNLPAER
QIEIWNKFLEFESNVGDLSSILKVEKRRAAVIEQLKEFEGKETALLVDRYKFMDLYPCTP
SELKSVGYKEIVKSHVSSLPTSMMVMKDSLLDDDKDRKPPFAKPDVLNMIPYKPRQICPT
KAHPVPGGVFPPPPSASFLMTLLPPPTSFQGPFAGVDDVMKVVKLWRPPENAPHPMENGV
SKDMEKYFEHAIKAISGEGKKRKIGVDGVPEDSDDEDGGMVPPVKDVYRARQQKKVK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgccagatatgtcaatttttgaggatcctggtgctttttttagtgataaaaataaaaaa
gccgaaaaacgtttagaacaaaatccatatgatgttgaagcttggaatcttattttgcgg
gatgcatctcatcaaaagatagaggatgcacgtccttattatgaaaagctggttgcacag
tttcctagtgcaggaagatattggaagctatacatcgaacacgagatgaaatctaggaac
tatgaaagagttgaaaagttatttactcgctgtctagtcaaagtattaaatattgatctt
tggagagtatatttaagttatgtcaaagaaactaaaggttctctgccatcttatagggaa
aaaatggcacaagcatatgattttgcattggagaaaatggggatggatattaattcatat
cctatttggaatgactatattaatttcttaaaaaatgtggaggctgttggaagttatgca
gagaatcaaagaataactgctgttagaaaagtttaccagcgtggtattatcaatcctatg
atgaatatagaacagctgtggaaagattatgttaattatgaacaaggtattaattctatt
attgctgataaaatgatacaagatagaagtagagactacatgaatgctcgaagagttgcc
aaggaatatgaagctgttacccgtggtttgaatcgaaatgcaccctctactccaccccaa
ggtcttcctgaagaaatcaaacaagttgaactatggaagaaatatattctttgggaaaaa
agcaatcctttacgcactgaagatcaatcagttctcactaaaagagttatgtttgcttat
gaacaatgcctgttatgtcttggtcaccacccagatatatggtatgaggctgctttgttt
cttgagttgtctagcaaacttttacaagagaaaggggaccttgctgctggcaaaatgttt
agtgaagaagctgcagctgtttatgatagggcgactgcaacatttctgaagactaatatg
ttgttacactttgcatatgcagattttgaagagggacgaatgaaatatgataaagttcat
gctatttataacaaatttattgaaaatccagatattgatccaacacttgcttatatacag
tacatgaaatttgctcgcagggctgaaggcatcaaatctgcgagaaatatttttcgcaaa
atgagagaaaatgaaaagacaagatatcatatatttgttgctgctgcatggatggagtat
tattgtaataaggacaaaaatattgctttcaaaatttttgaactaggccttaaaaagcat
ggagataatcctgattatgttttatcttacatagactatctttctcatttgaatgatgac
aataatacaagggtactttttgaaagagttctttcatctggaaatttacctgctgaaaga
caaattgaaatatggaataaatttctggagtttgaatcaaatgtgggagatctatcaagc
atactaaaagttgaaaaacgaagagctgcagtcattgaacagctcaaagaatttgaaggc
aaagaaacagccttattggttgatcgatataaattcatggatttatatccttgtactcca
tctgaactgaaatctgttggttacaaggaaattgtgaaaagccatgtttctagtttgcca
acttcaatgatggtcatgaaggactctcttttagatgatgataaagatagaaagcctcct
tttgcaaaacctgatgtcttaaatatgataccctataaacctcgccaaatatgccctact
aaggcacaccctgttcctggtggcgtgtttccccctcctccatctgcatcatttttaatg
actttattacctcctccgacatcatttcaaggtccttttgctggcgttgatgatgtgatg
aaagtagtcaaattgtggagacccccagaaaatgctccccaccctatggaaaatggtgtg
tcaaaagatatggaaaaatactttgagcatgccattaaagccatttctggggaaggcaaa
aaaagaaaaattggtgttgatggtgttcctgaagatagcgatgacgaggatggtggcatg
gtcccaccagtgaaagatgtttatcgtgctaggcaacaaaagaaagtgaagtaa
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