Parasteatoda tepidariorum (common house spider): 107439205
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Entry
107439205 CDS
T06106
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1
KO
K11981
E3 ubiquitin-protein ligase NRDP1 [EC:
2.3.2.27
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107439205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptep04131
]
107439205
04121 Ubiquitin system [BR:
ptep04121
]
107439205
03029 Mitochondrial biogenesis [BR:
ptep03029
]
107439205
Enzymes [BR:
ptep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107439205
Membrane trafficking [BR:
ptep04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
107439205
Autophagy
Mitophagy
PINK1-Parkin associated proteins
107439205
Ubiquitin system [BR:
ptep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107439205
Mitochondrial biogenesis [BR:
ptep03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
107439205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_interact
zf-C3HC4_2
zf-C3HC4
zf-RING_2
U-box
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-Nse
zf-rbx1
zf-RING_5
zf-RING_6
zf-ANAPC11
zf-RING_10
Sina_ZnF
DUF641
Sina_RING
IBR_1
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
107439205
NCBI-ProteinID:
XP_015907202
LinkDB
All DBs
Position
5:83007483..83008939
Genome browser
AA seq
312 aa
AA seq
DB search
MGYDITRFEGEVDEELICPICSGVLEEPLHAPQCEHAFCKSCINEWLARQPSCPVDRQPI
TPNELKPVPRILRNLLSRLLIMCDNEKFGCSVIVKLERLEIHKEECEHNPKRPVPCEQGC
GLVVPKDELREHNCVREMRMLLQTQQLRINEMQCNLNETRKDIDLLKTCVQECIRAMRLA
NPSVPALVETLEQDETMRWIGSLQRARVTRWGGMISTPDSVLQTMVRRALSESGCPPHLA
AELMENAHERRWPTGLSTLETRQSNRRYYENYVCKRIPGKQAVVVMAVDNPHMNDDMVLD
PGLVMIFAHGIE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggatacgatattactcgattcgaaggtgaagttgacgaagaattgatctgtcctatt
tgttctggtgttttggaagagcccttgcatgctccgcaatgtgaacacgctttttgtaaa
agttgtattaatgaatggcttgcaaggcaaccgtcttgtcctgtagaccgtcaaccaatt
actccaaatgaattgaaaccagtgccgcgaattctgcgtaatttactttcccgtttactt
attatgtgtgataatgaaaaatttggctgctctgttatagtgaaactagagcgtcttgaa
atccacaaggaagaatgtgagcataatcctaaacgacctgttccttgcgagcaagggtgt
ggattggttgtgccaaaagatgaattaagagagcataattgtgttagagaaatgagaatg
ctgttgcaaactcagcaactgaggatcaacgaaatgcaatgcaatctgaatgagaccagg
aaagacattgacttgctgaaaacctgcgtgcaagaatgcattcgtgcaatgagattagcc
aatccaagtgttccggcattagtagaaactctcgaacaagacgaaactatgagatggatc
ggttctctacagcgagctcgtgtaacgcgttggggtggcatgatttcgacacctgattcc
gttttgcaaaccatggtgagaagagcactgagtgaaagtggttgtcctccacacctagct
gcggagttaatggaaaacgctcacgaaagaagatggcctacgggtttgagtactttagag
acccgtcagtccaataggagatattatgagaattatgtttgcaaaagaattcctggtaaa
caagctgttgttgtaatggctgttgataatccccatatgaatgatgatatggtcttagat
cctggattagtcatgatttttgctcatggtattgagtaa
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