Parasteatoda tepidariorum (common house spider): 107439251
Help
Entry
107439251 CDS
T06106
Name
(RefSeq) replication factor C subunit 4 isoform X2
KO
K10755
replication factor C subunit 2/4
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03030
DNA replication
ptep03410
Base excision repair
ptep03420
Nucleotide excision repair
ptep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107439251
03410 Base excision repair
107439251
03420 Nucleotide excision repair
107439251
03430 Mismatch repair
107439251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptep03032
]
107439251
03036 Chromosome and associated proteins [BR:
ptep03036
]
107439251
03400 DNA repair and recombination proteins [BR:
ptep03400
]
107439251
DNA replication proteins [BR:
ptep03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107439251
DNA Replication Termination Factors
ELG1-RFC complex
107439251
Chromosome and associated proteins [BR:
ptep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107439251
DNA repair and recombination proteins [BR:
ptep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107439251
Check point factors
HRAD17(Rad24)-RFC complex
107439251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA_assoc_2
AAA_16
AAA_30
AAA_11
AAA_24
AAA_22
bpMoxR
SLFN-g3_helicase
Mg_chelatase
AAA_5
RuvB_N
AAA_28
DUF815
AAA_19
AAA_7
Viral_helicase1
ResIII
nSTAND3
DNAX_ATPase_lid
Cdc6_lid
RNA_helicase
AAA_18
AAA_3
Motif
Other DBs
NCBI-GeneID:
107439251
NCBI-ProteinID:
XP_015907258
LinkDB
All DBs
Position
6:6932286..6945424
Genome browser
AA seq
362 aa
AA seq
DB search
MEAFLKGYKPGSIKVKPSTSKDDESASTSKKTKRPTPWVEKYRPKCMNEVVYQDEVVAVL
KKSLANPDLPNLLFYGPPGTGKTSTILALSREIFGDMFKTRILELNASDERGIQVIRDKV
KTFAQQTASATRPDGRPCPPFKIVILDEADSMTNAAQSALRRTMEKASKSTRFCLICNYI
SRIIDPLTSRCSKFRFKPLSKETLSQRLNYITTEENVKLEEKVIDSIIEYSEGDLRKAIT
LLQSAHRLKGEDGITATDVADISGIVPNKWLKDLMKVCQSDSYEKLENFVCTLSHEGYTA
GQLINQLHDEIVFNDTLNDKQKSAICEKLAICDKRLLDGADEFLQLMDLCCTIMQQICHT
VD
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggaagctttcttgaaaggttacaaacctggatcaattaaggtgaaaccaagcacatct
aaagatgatgaaagtgcatccacatctaagaaaacaaaaagacctactccttgggtggaa
aaatatcgtccaaaatgcatgaacgaggttgtttatcaagatgaagtagttgcagtttta
aaaaagagcttagccaatcctgatcttcctaatctgctgttctatggcccccctggtact
ggaaaaacttcaactatactggctctgtctagagaaatatttggtgacatgtttaagact
aggatattggaacttaatgcttcagatgagcgtggtatacaagttattcgagataaagta
aaaacatttgctcagcaaactgctagtgcaactcgacccgatggtcgaccttgtccacct
tttaaaattgtaatattggatgaagcagattcaatgacaaatgctgcacagtctgctctt
cgaagaactatggagaaagccagtaaatccactcgattctgtctaatatgtaactatatt
agtagaatcattgatcctctcacatccagatgttccaaatttcgattcaagccattatct
aaagagactttatctcagcgtctaaactacattaccactgaagagaatgtaaagttggaa
gaaaaggtgattgattccattattgaatattctgaaggagatctgaggaaggccattaca
ctattgcaaagcgctcatcgtttaaaaggagaggatggaataacagccaccgatgttgct
gatatcagtggaattgttcccaacaaatggcttaaagatttgatgaaagtttgtcaatct
gatagttacgaaaagctagaaaattttgtctgcacactatctcatgaaggatatactgct
ggtcaactcataaatcaacttcacgatgaaatagtatttaatgacacattaaatgataaa
cagaaatctgctatatgtgaaaaattagctatttgtgataaacgcttactcgatggtgca
gatgaatttttgcaattgatggatttgtgctgtactataatgcaacaaatttgccataca
gtggattga
DBGET
integrated database retrieval system
